RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 GNRH2O43555 120 aa13.57□□□□□ -0.24
SPSB4-201ENST00000310546 IGHV1-69DA0A0B4J2H0 117 aa13.57□□□□□ -0.24
SPSB4-201ENST00000310546 H7C423 109 aa13.57□□□□□ -0.24
SPSB4-201ENST00000310546 CLEC19AQ6UXS0 136 aa13.57□□□□□ -0.24
SPSB4-201ENST00000310546 TMEM126AQ9H061 195 aa13.57□□□□□ -0.24
SPSB4-201ENST00000310546 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.56□□□□□ -0.24
SPSB4-201ENST00000310546 CLPSL1A2RUU4 121 aa13.56□□□□□ -0.24
SPSB4-201ENST00000310546 ADARB2-AS1A8MUL3 147 aa13.56□□□□□ -0.24
SPSB4-201ENST00000310546 ECSCRQ19T08 205 aa13.56□□□□□ -0.24
SPSB4-201ENST00000310546 ZNF876PQ49A33 203 aa13.56□□□□□ -0.24
SPSB4-201ENST00000310546 LINC01587Q99440 93 aa13.56□□□□□ -0.24
SPSB4-201ENST00000310546 F5H697 171 aa13.55□□□□□ -0.24
SPSB4-201ENST00000310546 FAM236AA0A1B0GUQ0 79 aa13.55□□□□□ -0.24
SPSB4-201ENST00000310546 FAM236BA0A1B0GV22 79 aa13.55□□□□□ -0.24
SPSB4-201ENST00000310546 PPP1R17O96001 155 aa13.55□□□□□ -0.24
SPSB4-201ENST00000310546 ZNF580Q9UK33 172 aa13.55□□□□□ -0.24
SPSB4-201ENST00000310546 TRGV11A0A075B6L2 103 aa13.54□□□□□ -0.24
SPSB4-201ENST00000310546 TMEM141Q96I45 108 aa13.54□□□□□ -0.24
SPSB4-201ENST00000310546 KMT2BQ9UMN6 2715 aaPredicted RBP13.54□□□□□ -0.24
SPSB4-201ENST00000310546 NOTCH2Q04721 2471 aa13.54□□□□□ -0.24
SPSB4-201ENST00000310546 ZNF22P17026 224 aaPredicted RBP13.54□□□□□ -0.24
SPSB4-201ENST00000310546 CLEC2BQ92478 149 aa13.54□□□□□ -0.24
SPSB4-201ENST00000310546 JPT2Q9H910 190 aa13.54□□□□□ -0.24
SPSB4-201ENST00000310546 NBPF19A0A087WUL8 3843 aa13.54□□□□□ -0.24
SPSB4-201ENST00000310546 FBN2P35556 2912 aa13.54□□□□□ -0.24
SPSB4-201ENST00000310546 TRAV21A0A0B4J279 112 aa13.53□□□□□ -0.24
SPSB4-201ENST00000310546 TRBV30A0A0K0K1B3 111 aa13.53□□□□□ -0.24
SPSB4-201ENST00000310546 RNASE4P34096 147 aaKnown RBP13.53□□□□□ -0.24
SPSB4-201ENST00000310546 LINC00694P0DN24 101 aa13.53□□□□□ -0.24
SPSB4-201ENST00000310546 METTL26Q96S19 204 aa13.53□□□□□ -0.24
SPSB4-201ENST00000310546 ZNF256Q9Y2P7 627 aaPredicted RBP13.53□□□□□ -0.24
SPSB4-201ENST00000310546 NAV2Q8IVL1 2488 aa13.53□□□□□ -0.24
SPSB4-201ENST00000310546 A0A087WWL8 130 aa13.53□□□□□ -0.24
SPSB4-201ENST00000310546 M0R2P5 195 aa13.53□□□□□ -0.24
SPSB4-201ENST00000310546 UBE2E1P51965 193 aa13.53□□□□□ -0.24
SPSB4-201ENST00000310546 Q6ZSV7 163 aa13.53□□□□□ -0.24
SPSB4-201ENST00000310546 ITLN2Q8WWU7 325 aaPredicted RBP13.52□□□□□ -0.24
SPSB4-201ENST00000310546 TIMM17AQ99595 171 aa13.52□□□□□ -0.24
SPSB4-201ENST00000310546 HELZ2Q9BYK8 2649 aaKnown RBP13.52□□□□□ -0.25
SPSB4-201ENST00000310546 LEPROTO15243 131 aa13.52□□□□□ -0.25
SPSB4-201ENST00000310546 NPC2P61916 151 aa13.52□□□□□ -0.25
SPSB4-201ENST00000310546 ZFAND2AQ8N6M9 145 aa13.52□□□□□ -0.25
SPSB4-201ENST00000310546 C20orf173Q96LM9 149 aa13.52□□□□□ -0.25
SPSB4-201ENST00000310546 MUC4Q99102 2169 aa13.51□□□□□ -0.25
SPSB4-201ENST00000310546 SDHAF1A6NFY7 115 aa13.51□□□□□ -0.25
SPSB4-201ENST00000310546 ICOSQ9Y6W8 199 aa13.51□□□□□ -0.25
SPSB4-201ENST00000310546 DOPEY2Q9Y3R5 2298 aa13.51□□□□□ -0.25
SPSB4-201ENST00000310546 IGHV7-81A0A0B4J1V7 117 aa13.51□□□□□ -0.25
SPSB4-201ENST00000310546 OOSP1A8MZH6 123 aa13.51□□□□□ -0.25
SPSB4-201ENST00000310546 NRGNQ92686 78 aa13.51□□□□□ -0.25
SPSB4-201ENST00000310546 LOC107984640A0A0U1RRK4 108 aa13.5□□□□□ -0.25
SPSB4-201ENST00000310546 TMEM223A0PJW6 202 aa13.5□□□□□ -0.25
SPSB4-201ENST00000310546 VCYO14598 125 aa13.5□□□□□ -0.25
SPSB4-201ENST00000310546 CEMP1Q6PRD7 247 aaPredicted RBP13.5□□□□□ -0.25
SPSB4-201ENST00000310546 TMEM101Q96IK0 257 aa13.5□□□□□ -0.25
SPSB4-201ENST00000310546 POLR2KP53803 58 aaKnown RBP13.5□□□□□ -0.25
SPSB4-201ENST00000310546 COX6CP09669 75 aa13.5□□□□□ -0.25
SPSB4-201ENST00000310546 RNASE3P12724 160 aaKnown RBP13.5□□□□□ -0.25
SPSB4-201ENST00000310546 MRPL23Q16540 153 aaKnown RBP13.5□□□□□ -0.25
SPSB4-201ENST00000310546 C9orf153Q5TBE3 101 aa13.5□□□□□ -0.25
SPSB4-201ENST00000310546 MRPL53Q96EL3 112 aaKnown RBP13.5□□□□□ -0.25
SPSB4-201ENST00000310546 FAM74A4Q5TZK3 123 aa13.49□□□□□ -0.25
SPSB4-201ENST00000310546 SUMO4Q6EEV6 95 aa13.49□□□□□ -0.25
SPSB4-201ENST00000310546 A0A0J9YXY3 114 aa13.49□□□□□ -0.25
SPSB4-201ENST00000310546 ATP5J2P56134 94 aa13.49□□□□□ -0.25
SPSB4-201ENST00000310546 CCDC140Q96MF4 163 aa13.49□□□□□ -0.25
SPSB4-201ENST00000310546 ANKRD17O75179 2603 aaKnown RBP13.48□□□□□ -0.25
SPSB4-201ENST00000310546 TRAV8-3A0A0A6YYJ7 113 aa13.48□□□□□ -0.25
SPSB4-201ENST00000310546 H3BT86 120 aa13.48□□□□□ -0.25
SPSB4-201ENST00000310546 ZNF843Q8N446 348 aa13.48□□□□□ -0.25
SPSB4-201ENST00000310546 A0A0J9YXV3 536 aa13.47□□□□□ -0.25
SPSB4-201ENST00000310546 TRBV7-7A0A0K0K1E9 115 aa13.47□□□□□ -0.25
SPSB4-201ENST00000310546 F6UB75 175 aa13.47□□□□□ -0.25
SPSB4-201ENST00000310546 LINC01600Q96MT4 127 aa13.47□□□□□ -0.25
SPSB4-201ENST00000310546 SPXQ9BT56 116 aa13.47□□□□□ -0.25
SPSB4-201ENST00000310546 IGKV3-7A0A075B6H7 116 aa13.47□□□□□ -0.25
SPSB4-201ENST00000310546 LINC00315P59091 139 aa13.47□□□□□ -0.25
SPSB4-201ENST00000310546 FAM240AA0A1B0GVK7 77 aa13.46□□□□□ -0.25
SPSB4-201ENST00000310546 CSDC2Q9Y534 153 aaKnown RBP13.46□□□□□ -0.25
SPSB4-201ENST00000310546 FASNP49327 2511 aaKnown RBP13.46□□□□□ -0.25
SPSB4-201ENST00000310546 TENM4Q6N022 2769 aa13.46□□□□□ -0.25
SPSB4-201ENST00000310546 G3V318 75 aa13.46□□□□□ -0.25
SPSB4-201ENST00000310546 LINC00477Q96M19 166 aa13.46□□□□□ -0.25
SPSB4-201ENST00000310546 IGHV4OR15-8A0A075B7B6 117 aa13.46□□□□□ -0.26
SPSB4-201ENST00000310546 A0A087WW49 117 aa13.46□□□□□ -0.26
SPSB4-201ENST00000310546 RPL11P62913 178 aaKnown RBP13.46□□□□□ -0.26
SPSB4-201ENST00000310546 EEF1AKMT3Q96AZ1 226 aa13.46□□□□□ -0.26
SPSB4-201ENST00000310546 LENEPQ9Y5L5 61 aa13.46□□□□□ -0.26
SPSB4-201ENST00000310546 PRRC2AP48634 2157 aaKnown RBP13.46□□□□□ -0.26
SPSB4-201ENST00000310546 SONP18583 2426 aaKnown RBP13.45□□□□□ -0.26
SPSB4-201ENST00000310546 KLK5Q9Y337 293 aaPredicted RBP13.45□□□□□ -0.26
SPSB4-201ENST00000310546 KIF25-AS1Q9Y6Z4 181 aa13.45□□□□□ -0.26
SPSB4-201ENST00000310546 EBI3Q14213 229 aa13.45□□□□□ -0.26
SPSB4-201ENST00000310546 VMO1Q7Z5L0 202 aa13.45□□□□□ -0.26
SPSB4-201ENST00000310546 ADAMTSL4-AS1Q5T5F5 129 aa13.44□□□□□ -0.26
SPSB4-201ENST00000310546 ATP6V0E1O15342 81 aa13.44□□□□□ -0.26
SPSB4-201ENST00000310546 NDUFA7O95182 113 aa13.43□□□□□ -0.26
SPSB4-201ENST00000310546 DNAJC30Q96LL9 226 aa13.43□□□□□ -0.26
SPSB4-201ENST00000310546 IGHV3-30-3P0DP02 117 aa13.43□□□□□ -0.26
SPSB4-201ENST00000310546 C9orf139Q6ZV77 190 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms