RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 TP53TG1Q9Y2A0 90 aa9.17□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 IGHV3-53P01767 116 aa9.16□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 POLR2KP53803 58 aaKnown RBP9.16□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 ZNF56Q15929 161 aa9.16□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 DEFB135Q30KP9 77 aa9.16□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 SMIM2Q9BVW6 85 aa9.16□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 NIT2Q9NQR4 276 aa9.16□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 MIFP14174 115 aa9.16□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 FAM19A2Q8N3H0 131 aa9.16□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 OR4C5Q8NGB2 326 aa9.16□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 OR11H2Q8NH07 326 aa9.16□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 RPL39LQ96EH5 51 aaKnown RBP9.16□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 ST20Q9HBF5 79 aa9.16□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 NACAE9PAV3 2078 aa9.15□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 IGHV1-24A0A0C4DH33 117 aa9.15□□□□□ -0.94
SHANK2-AS3-201ENST00000307548 NBEAL2Q6ZNJ1 2754 aa9.15□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 LYRM9A8MSI8 78 aa9.14□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 J3QL48 77 aa9.14□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 VCYO14598 125 aa9.14□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 SBSPONQ8IVN8 264 aa9.14□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 TRBV27A0A0K0K1C4 114 aa9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 DEFB121Q5J5C9 76 aa9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 Q8NAQ8 132 aa9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 DNAJC30Q96LL9 226 aa9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 TMEM70Q9BUB7 260 aa9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 A0A096LNJ9 63 aa9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 GAGE12BA1L429 117 aa9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 GAGE7O76087 117 aa9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 GAGE12FP0CL80 117 aa9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 GAGE12GP0CL81 117 aa9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 GAGE12IP0CL82 117 aa9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 FCER1GP30273 86 aa9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 JOSD1Q15040 202 aaPredicted RBP9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 Q6ZSN1 163 aa9.13□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 IGHV3-73A0A0B4J1V6 119 aa9.12□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 SDHAF1A6NFY7 115 aa9.12□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 SMIM6P0DI80 62 aa9.12□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 LAGE3Q14657 143 aa9.12□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 MRAPQ8TCY5 172 aa9.12□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 ZNF479Q96JC4 524 aa9.12□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 TM2D3Q9BRN9 247 aa9.12□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 TRGV2A0A075B6R0 118 aa9.11□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 IGHV4-28A0A0C4DH34 117 aa9.11□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 TRBV10-1A0A0K0K1A3 114 aa9.11□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 TCAPO15273 167 aa9.11□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 LEPROTL1O95214 131 aa9.11□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 HBDP02042 147 aa9.11□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 PMCHL1Q16048 86 aa9.11□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 ORMDL2Q53FV1 153 aa9.11□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 RETNQ9HD89 108 aa9.11□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 HSPB8Q9UJY1 196 aa9.11□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 PYY3Q5JQD4 70 aa9.1□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 LINC00518Q8N0U6 118 aa9.1□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 DKK2Q9UBU2 259 aa9.1□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 TRBV6-4A0A1B0GX49 114 aa9.1□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 G0S2P27469 103 aa9.1□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 EMP1P54849 157 aa9.1□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 DEFA6Q01524 100 aa9.1□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 NEXN-AS1Q8NBZ9 246 aa9.1□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 KIR2DL4Q99706 377 aa9.1□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 TNFRSF18Q9Y5U5 241 aa9.1□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 LINC01549A6NIU2 74 aa9.09□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 C3orf79P0CE67 100 aa9.09□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 FAM222AQ5U5X8 452 aa9.09□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 B9D2Q9BPU9 175 aa9.09□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 HUWE1Q7Z6Z7 4374 aaKnown RBP9.09□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 TENM3Q9P273 2699 aa9.09□□□□□ -0.95
SHANK2-AS3-201ENST00000307548 TEX48A0A1B0GUV7 120 aa9.08□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 I3L3M4 83 aa9.08□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 K7EQD1 137 aa9.08□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 P0DMU3 169 aa9.08□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 FAM231AP0DMU4 169 aa9.08□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 FAM231CP0DMU5 169 aa9.08□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 FHL2Q14192 279 aa9.08□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 SPART-AS1P0CW21 52 aa9.07□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 BTF3P20290 206 aaKnown RBP9.07□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 RHOHQ15669 191 aa9.07□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 SPATA12Q7Z6I5 190 aa9.07□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 SLC25A29Q8N8R3 303 aa9.07□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 SPATA25Q9BR10 227 aa9.07□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 TRBV7-3A0A075B6L6 115 aa9.07□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 DEFB130BP0DP73 79 aa9.07□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 DEFB130AP0DP74 79 aa9.07□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 LINC00173Q6ZV60 143 aa9.07□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 Q9UF83 564 aa9.07□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 TRGV4A0A0C4DH28 118 aa9.06□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 NUDT3O95989 172 aa9.06□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 TSHBP01222 138 aa9.06□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 KRTDAPP60985 99 aa9.06□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 RPL36AP83881 106 aaKnown RBP9.06□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 RPL36ALQ969Q0 106 aaKnown RBP9.06□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 TOMM6Q96B49 74 aa9.06□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 C12orf57Q99622 126 aa9.06□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 MAP1LC3CQ9BXW4 147 aa9.06□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 C11orf68Q9H3H3 251 aaKnown RBP9.06□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 SYS1-DBNDD2H3BUS1 97 aa9.05□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 ATP5LO75964 103 aa9.05□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 PET117Q6UWS5 81 aa9.05□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 NEGR1Q7Z3B1 354 aa9.05□□□□□ -0.96
SHANK2-AS3-201ENST00000307548 Q8N976 141 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms