RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 IGHV4-28A0A0C4DH34 117 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 IGKV3D-7A0A0C4DH55 119 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 A0A0J9YX75 114 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 TMEM89A2RUT3 159 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 NCR3O14931 201 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 ZNF80P51504 273 aaPredicted RBP10.63□□□□□ -0.71
PRKCB-201ENST00000303531 A0A0B4J2C4 111 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 A0A1B0GXF2 115 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 SS18L2Q9UHA2 77 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 IGLV2-8P01709 118 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 TMEM131Q92545 1883 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 Q8NA96 180 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 CLEC2BQ92478 149 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 CCDC140Q96MF4 163 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 LGALS9O00182 355 aa10.63□□□□□ -0.71
PRKCB-201ENST00000303531 TANC2Q9HCD6 1990 aa10.62□□□□□ -0.71
PRKCB-201ENST00000303531 ANKHD1Q8IWZ3 2542 aaKnown RBP10.62□□□□□ -0.71
PRKCB-201ENST00000303531 KIAA1549LQ6ZVL6 1849 aa10.62□□□□□ -0.71
PRKCB-201ENST00000303531 FBXL19-AS1Q494R0 122 aa10.62□□□□□ -0.71
PRKCB-201ENST00000303531 TMEM61Q8N0U2 210 aa10.62□□□□□ -0.71
PRKCB-201ENST00000303531 DEFB4AO15263 64 aa10.62□□□□□ -0.71
PRKCB-201ENST00000303531 C20orf203Q8NBC4 194 aa10.62□□□□□ -0.71
PRKCB-201ENST00000303531 A6NDX4 124 aa10.62□□□□□ -0.71
PRKCB-201ENST00000303531 CCL18P55774 89 aa10.62□□□□□ -0.71
PRKCB-201ENST00000303531 ZNF295-AS1Q8N0V1 137 aa10.62□□□□□ -0.71
PRKCB-201ENST00000303531 IGHV1-58A0A0C4DH39 117 aa10.61□□□□□ -0.71
PRKCB-201ENST00000303531 TIRAPP58753 221 aa10.61□□□□□ -0.71
PRKCB-201ENST00000303531 FOXI1Q12951 378 aa10.61□□□□□ -0.71
PRKCB-201ENST00000303531 DEFB135Q30KP9 77 aa10.61□□□□□ -0.71
PRKCB-201ENST00000303531 CITED1Q99966 193 aa10.61□□□□□ -0.71
PRKCB-201ENST00000303531 CRIP3Q6Q6R5 217 aa10.61□□□□□ -0.71
PRKCB-201ENST00000303531 CSPG4Q6UVK1 2322 aa10.61□□□□□ -0.71
PRKCB-201ENST00000303531 LECT2O14960 151 aa10.61□□□□□ -0.71
PRKCB-201ENST00000303531 LINC00574Q9H8X3 128 aa10.61□□□□□ -0.71
PRKCB-201ENST00000303531 NDUFA1O15239 70 aa10.6□□□□□ -0.71
PRKCB-201ENST00000303531 CEMP1Q6PRD7 247 aaPredicted RBP10.6□□□□□ -0.71
PRKCB-201ENST00000303531 C1orf229Q6ZS94 237 aaPredicted RBP10.6□□□□□ -0.71
PRKCB-201ENST00000303531 NOTCH2Q04721 2471 aa10.6□□□□□ -0.71
PRKCB-201ENST00000303531 LINC01548A6NM66 108 aa10.6□□□□□ -0.71
PRKCB-201ENST00000303531 GDF5OSQ5U4N7 250 aa10.6□□□□□ -0.71
PRKCB-201ENST00000303531 DSCAML1Q8TD84 2053 aa10.6□□□□□ -0.71
PRKCB-201ENST00000303531 ZNF106Q9H2Y7 1883 aaKnown RBP10.6□□□□□ -0.71
PRKCB-201ENST00000303531 ODF3BA8MYP8 253 aa10.6□□□□□ -0.71
PRKCB-201ENST00000303531 MIR7-3HGQ8N6C7 128 aa10.6□□□□□ -0.71
PRKCB-201ENST00000303531 TRBV10-2A0A0K0K1G8 114 aa10.59□□□□□ -0.71
PRKCB-201ENST00000303531 FAM236AA0A1B0GUQ0 79 aa10.59□□□□□ -0.71
PRKCB-201ENST00000303531 FAM236BA0A1B0GV22 79 aa10.59□□□□□ -0.71
PRKCB-201ENST00000303531 MYCNOSP40205 109 aa10.59□□□□□ -0.71
PRKCB-201ENST00000303531 CACNA1AO00555 2505 aa10.59□□□□□ -0.71
PRKCB-201ENST00000303531 TMEM258P61165 79 aa10.59□□□□□ -0.71
PRKCB-201ENST00000303531 TMEM263Q8WUH6 116 aaKnown RBP10.59□□□□□ -0.71
PRKCB-201ENST00000303531 A0A1B0GX51 115 aa10.58□□□□□ -0.72
PRKCB-201ENST00000303531 F8W735 103 aaPredicted RBP10.58□□□□□ -0.72
PRKCB-201ENST00000303531 SPAG11BQ08648 103 aa10.58□□□□□ -0.72
PRKCB-201ENST00000303531 MAP6D1Q9H9H5 199 aa10.58□□□□□ -0.72
PRKCB-201ENST00000303531 SPANXCQ9NY87 97 aa10.58□□□□□ -0.72
PRKCB-201ENST00000303531 TP53TG3Q9ULZ0 132 aa10.58□□□□□ -0.72
PRKCB-201ENST00000303531 SPATA12Q7Z6I5 190 aa10.58□□□□□ -0.72
PRKCB-201ENST00000303531 MYO18BQ8IUG5 2567 aa10.58□□□□□ -0.72
PRKCB-201ENST00000303531 Q6ZUT4 128 aa10.58□□□□□ -0.72
PRKCB-201ENST00000303531 CXCL5P42830 114 aa10.57□□□□□ -0.72
PRKCB-201ENST00000303531 PCNX3Q9H6A9 2034 aa10.57□□□□□ -0.72
PRKCB-201ENST00000303531 NFE4Q86UQ8 179 aa10.57□□□□□ -0.72
PRKCB-201ENST00000303531 KLK12Q9UKR0 248 aa10.57□□□□□ -0.72
PRKCB-201ENST00000303531 TECTAO75443 2155 aa10.57□□□□□ -0.72
PRKCB-201ENST00000303531 P0DMU3 169 aa10.57□□□□□ -0.72
PRKCB-201ENST00000303531 FAM231AP0DMU4 169 aa10.57□□□□□ -0.72
PRKCB-201ENST00000303531 FAM231CP0DMU5 169 aa10.57□□□□□ -0.72
PRKCB-201ENST00000303531 NDUFA11Q86Y39 141 aa10.57□□□□□ -0.72
PRKCB-201ENST00000303531 TNRC6BQ9UPQ9 1833 aaKnown RBP10.57□□□□□ -0.72
PRKCB-201ENST00000303531 ATOX1O00244 68 aa10.56□□□□□ -0.72
PRKCB-201ENST00000303531 NREPQ16612 68 aa10.56□□□□□ -0.72
PRKCB-201ENST00000303531 LMO4P61968 165 aa10.56□□□□□ -0.72
PRKCB-201ENST00000303531 MLST8Q9BVC4 326 aa10.56□□□□□ -0.72
PRKCB-201ENST00000303531 PKIGQ9Y2B9 76 aa10.56□□□□□ -0.72
PRKCB-201ENST00000303531 EIF4EBP1Q13541 118 aaPredicted RBP10.56□□□□□ -0.72
PRKCB-201ENST00000303531 PTH2Q96A98 100 aa10.56□□□□□ -0.72
PRKCB-201ENST00000303531 KIAA1549Q9HCM3 1950 aa10.56□□□□□ -0.72
PRKCB-201ENST00000303531 H3BT86 120 aa10.56□□□□□ -0.72
PRKCB-201ENST00000303531 PSMB8P28062 276 aa10.56□□□□□ -0.72
PRKCB-201ENST00000303531 IGLC6P0CF74 106 aa10.55□□□□□ -0.72
PRKCB-201ENST00000303531 OTOGLQ3ZCN5 2332 aa10.55□□□□□ -0.72
PRKCB-201ENST00000303531 JMJD7-PLA2G4BH0Y9G9 81 aa10.55□□□□□ -0.72
PRKCB-201ENST00000303531 C22orf34Q6ZV56 151 aa10.55□□□□□ -0.72
PRKCB-201ENST00000303531 LTBP2Q14767 1821 aa10.55□□□□□ -0.72
PRKCB-201ENST00000303531 TNFRSF13BO14836 293 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-201ENST00000303531 HCFC1P51610 2035 aa10.55□□□□□ -0.72
PRKCB-201ENST00000303531 G3V4G9 280 aa10.54□□□□□ -0.72
PRKCB-201ENST00000303531 H3BQ85 93 aa10.54□□□□□ -0.72
PRKCB-201ENST00000303531 TRBV10-1A0A0K0K1A3 114 aa10.54□□□□□ -0.72
PRKCB-201ENST00000303531 CLPSL1A2RUU4 121 aa10.54□□□□□ -0.72
PRKCB-201ENST00000303531 PCDH15Q96QU1 1955 aa10.54□□□□□ -0.72
PRKCB-201ENST00000303531 DIRC1Q969H9 104 aa10.54□□□□□ -0.72
PRKCB-201ENST00000303531 PRO0255Q9UI72 69 aa10.54□□□□□ -0.72
PRKCB-201ENST00000303531 MIAQ16674 131 aa10.54□□□□□ -0.72
PRKCB-201ENST00000303531 DNAJC9-AS1A6NH13 148 aa10.53□□□□□ -0.72
PRKCB-201ENST00000303531 DSCAMO60469 2012 aa10.53□□□□□ -0.72
PRKCB-201ENST00000303531 TCL1BO95988 128 aa10.53□□□□□ -0.72
PRKCB-201ENST00000303531 HIVEP2P31629 2446 aa10.52□□□□□ -0.72
PRKCB-201ENST00000303531 A0A0J9YXY3 114 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 774 ms