RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 USMG5Q96IX5 58 aa10.7□□□□□ -0.7
SDC2-201ENST00000302190 NDUFA4O00483 81 aa10.69□□□□□ -0.7
SDC2-201ENST00000302190 COX6B1P14854 86 aa10.69□□□□□ -0.7
SDC2-201ENST00000302190 PRR9Q5T870 116 aa10.69□□□□□ -0.7
SDC2-201ENST00000302190 F8W735 103 aaPredicted RBP10.69□□□□□ -0.7
SDC2-201ENST00000302190 Q6ZS46 218 aa10.69□□□□□ -0.7
SDC2-201ENST00000302190 DLX4Q92988 240 aaPredicted RBP10.69□□□□□ -0.7
SDC2-201ENST00000302190 C1QTNF4Q9BXJ3 329 aa10.69□□□□□ -0.7
SDC2-201ENST00000302190 B4DSR2 109 aa10.69□□□□□ -0.7
SDC2-201ENST00000302190 LMO4P61968 165 aa10.69□□□□□ -0.7
SDC2-201ENST00000302190 C9JAW5 83 aa10.68□□□□□ -0.7
SDC2-201ENST00000302190 GAGE2BQ13066 116 aa10.68□□□□□ -0.7
SDC2-201ENST00000302190 GAGE2EQ4V326 116 aa10.68□□□□□ -0.7
SDC2-201ENST00000302190 GATD1Q8NB37 220 aa10.68□□□□□ -0.7
SDC2-201ENST00000302190 PTH2Q96A98 100 aa10.68□□□□□ -0.7
SDC2-201ENST00000302190 ZFAND3Q9H8U3 227 aa10.68□□□□□ -0.7
SDC2-201ENST00000302190 GAGE2DQ9UEU5 116 aa10.68□□□□□ -0.7
SDC2-201ENST00000302190 IGHV7-4-1A0A0J9YVY3 117 aa10.68□□□□□ -0.7
SDC2-201ENST00000302190 XCL2Q9UBD3 114 aa10.68□□□□□ -0.7
SDC2-201ENST00000302190 MRPS12O15235 138 aaKnown RBP10.68□□□□□ -0.7
SDC2-201ENST00000302190 COX6CP09669 75 aa10.68□□□□□ -0.7
SDC2-201ENST00000302190 A8MWV9 139 aa10.67□□□□□ -0.7
SDC2-201ENST00000302190 EDN2P20800 178 aa10.67□□□□□ -0.7
SDC2-201ENST00000302190 FOXI1Q12951 378 aa10.67□□□□□ -0.7
SDC2-201ENST00000302190 PMVKQ15126 192 aa10.67□□□□□ -0.7
SDC2-201ENST00000302190 DEFB112Q30KQ8 113 aa10.67□□□□□ -0.7
SDC2-201ENST00000302190 Q6ZUT4 128 aa10.67□□□□□ -0.7
SDC2-201ENST00000302190 MDFICQ9P1T7 246 aa10.67□□□□□ -0.7
SDC2-201ENST00000302190 TRBV20-1A0A075B6N2 111 aa10.66□□□□□ -0.7
SDC2-201ENST00000302190 RRN3P1Q2M238 152 aa10.66□□□□□ -0.7
SDC2-201ENST00000302190 PAPPA-AS1Q5QFB9 102 aa10.66□□□□□ -0.7
SDC2-201ENST00000302190 TRAV13-1A0A0B4J241 112 aa10.66□□□□□ -0.7
SDC2-201ENST00000302190 TRBV6-1A0A0K0K1D8 114 aa10.66□□□□□ -0.7
SDC2-201ENST00000302190 PRM2P04554 102 aa10.66□□□□□ -0.7
SDC2-201ENST00000302190 C11orf86A6NJI1 115 aa10.65□□□□□ -0.7
SDC2-201ENST00000302190 RPL32P62910 135 aaKnown RBP10.65□□□□□ -0.7
SDC2-201ENST00000302190 SUMO4Q6EEV6 95 aa10.65□□□□□ -0.7
SDC2-201ENST00000302190 XGP55808 180 aa10.65□□□□□ -0.7
SDC2-201ENST00000302190 GAGE12JA6NER3 117 aa10.65□□□□□ -0.71
SDC2-201ENST00000302190 GAGE7O76087 117 aa10.65□□□□□ -0.71
SDC2-201ENST00000302190 GAGE12FP0CL80 117 aa10.65□□□□□ -0.71
SDC2-201ENST00000302190 GAGE12GP0CL81 117 aa10.65□□□□□ -0.71
SDC2-201ENST00000302190 GAGE12IP0CL82 117 aa10.65□□□□□ -0.71
SDC2-201ENST00000302190 GAGE4Q13068 117 aa10.65□□□□□ -0.71
SDC2-201ENST00000302190 CEMP1Q6PRD7 247 aaPredicted RBP10.65□□□□□ -0.71
SDC2-201ENST00000302190 A0A0J9YXV3 536 aa10.64□□□□□ -0.71
SDC2-201ENST00000302190 CFHR3Q02985 330 aa10.64□□□□□ -0.71
SDC2-201ENST00000302190 BAALCQ8WXS3 180 aa10.64□□□□□ -0.71
SDC2-201ENST00000302190 ITPR3Q14573 2671 aa10.64□□□□□ -0.71
SDC2-201ENST00000302190 TRGV1A0A0A0MS02 117 aa10.64□□□□□ -0.71
SDC2-201ENST00000302190 RBAKDNA6NC62 111 aa10.64□□□□□ -0.71
SDC2-201ENST00000302190 E9PLD3 99 aa10.64□□□□□ -0.71
SDC2-201ENST00000302190 TMEM262E9PQX1 116 aa10.64□□□□□ -0.71
SDC2-201ENST00000302190 C9orf47Q6ZRZ4 202 aa10.64□□□□□ -0.71
SDC2-201ENST00000302190 RASL10AQ92737 203 aa10.64□□□□□ -0.71
SDC2-201ENST00000302190 PPDPFLQ8WWR9 84 aa10.64□□□□□ -0.71
SDC2-201ENST00000302190 J3QQQ9 107 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 C19orf54Q5BKX5 351 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 Q8N1Y9 231 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 FLNAP21333 2647 aaKnown RBP10.63□□□□□ -0.71
SDC2-201ENST00000302190 TRGV2A0A075B6R0 118 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 IGHV1OR15-1A0A075B7D0 117 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 NF1P21359 2839 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 UBE2L6O14933 153 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 P0DMU3 169 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 FAM231AP0DMU4 169 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 FAM231CP0DMU5 169 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 FBXL19-AS1Q494R0 122 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 ZFP2Q6ZN57 461 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 TMEM190Q8WZ59 177 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 HIGD1BQ9P298 99 aa10.63□□□□□ -0.71
SDC2-201ENST00000302190 RNASE1P07998 156 aaKnown RBP10.62□□□□□ -0.71
SDC2-201ENST00000302190 MXRA5Q9NR99 2828 aa10.62□□□□□ -0.71
SDC2-201ENST00000302190 UNC79Q9P2D8 2635 aa10.62□□□□□ -0.71
SDC2-201ENST00000302190 APRG1Q8IVJ8 170 aa10.62□□□□□ -0.71
SDC2-201ENST00000302190 C11orf68Q9H3H3 251 aaKnown RBP10.62□□□□□ -0.71
SDC2-201ENST00000302190 CLPSL1A2RUU4 121 aa10.62□□□□□ -0.71
SDC2-201ENST00000302190 FAM110AQ9BQ89 295 aa10.62□□□□□ -0.71
SDC2-201ENST00000302190 TIMM21Q9BVV7 248 aa10.62□□□□□ -0.71
SDC2-201ENST00000302190 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.61□□□□□ -0.71
SDC2-201ENST00000302190 IGKV2-29A2NJV5 120 aaPredicted RBP10.61□□□□□ -0.71
SDC2-201ENST00000302190 IGHG4P01861 327 aa10.61□□□□□ -0.71
SDC2-201ENST00000302190 DAND5Q8N907 189 aa10.61□□□□□ -0.71
SDC2-201ENST00000302190 CIRBPQ14011 172 aaKnown RBP10.61□□□□□ -0.71
SDC2-201ENST00000302190 ZFAND2AQ8N6M9 145 aa10.61□□□□□ -0.71
SDC2-201ENST00000302190 LGALS1P09382 135 aaKnown RBP10.6□□□□□ -0.71
SDC2-201ENST00000302190 SLURP1P55000 103 aa10.6□□□□□ -0.71
SDC2-201ENST00000302190 STHQ8IWL8 128 aa10.6□□□□□ -0.71
SDC2-201ENST00000302190 U3KQK5 164 aa10.6□□□□□ -0.71
SDC2-201ENST00000302190 OR13C6PQ8NH95 151 aa10.6□□□□□ -0.71
SDC2-201ENST00000302190 CDIP1Q9H305 208 aa10.6□□□□□ -0.71
SDC2-201ENST00000302190 TRGV11A0A075B6L2 103 aa10.6□□□□□ -0.71
SDC2-201ENST00000302190 KRTAP10-9P60411 292 aa10.6□□□□□ -0.71
SDC2-201ENST00000302190 C11orf71Q6IPW1 123 aa10.6□□□□□ -0.71
SDC2-201ENST00000302190 YAE1D1Q9NRH1 226 aa10.6□□□□□ -0.71
SDC2-201ENST00000302190 HHLA3Q9XRX5 114 aa10.6□□□□□ -0.71
SDC2-201ENST00000302190 RPL35AP18077 110 aaKnown RBP10.59□□□□□ -0.71
SDC2-201ENST00000302190 HOXD3P31249 432 aaPredicted RBP10.59□□□□□ -0.71
SDC2-201ENST00000302190 Q8N6K4 173 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms