RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 K7ENP7 123 aa9.49□□□□□ -0.89
ABCA3-201ENST00000301732 TRBV10-2A0A0K0K1G8 114 aa9.48□□□□□ -0.89
ABCA3-201ENST00000301732 IGLC6P0CF74 106 aa9.48□□□□□ -0.89
ABCA3-201ENST00000301732 NDUFB1O75438 58 aa9.48□□□□□ -0.89
ABCA3-201ENST00000301732 KIAA1549Q9HCM3 1950 aa9.48□□□□□ -0.89
ABCA3-201ENST00000301732 IGF1P05019 195 aa9.48□□□□□ -0.89
ABCA3-201ENST00000301732 PIK3CD-AS1Q5SR53 167 aa9.48□□□□□ -0.89
ABCA3-201ENST00000301732 LYPD6BQ8NI32 183 aa9.48□□□□□ -0.89
ABCA3-201ENST00000301732 PRR14LQ5THK1 2151 aa9.48□□□□□ -0.89
ABCA3-201ENST00000301732 CENPVL3A0A0U1RRI6 287 aa9.48□□□□□ -0.89
ABCA3-201ENST00000301732 RMI2Q96E14 147 aa9.47□□□□□ -0.89
ABCA3-201ENST00000301732 PTPN13Q12923 2485 aa9.47□□□□□ -0.89
ABCA3-201ENST00000301732 FAM167A-AS1Q96KT0 104 aa9.47□□□□□ -0.89
ABCA3-201ENST00000301732 SORL1Q92673 2214 aa9.47□□□□□ -0.89
ABCA3-201ENST00000301732 ZNF80P51504 273 aaPredicted RBP9.47□□□□□ -0.89
ABCA3-201ENST00000301732 SPAG11BQ08648 103 aa9.47□□□□□ -0.89
ABCA3-201ENST00000301732 TOMM6Q96B49 74 aa9.47□□□□□ -0.89
ABCA3-201ENST00000301732 C22orf34Q6ZV56 151 aa9.47□□□□□ -0.89
ABCA3-201ENST00000301732 FANCD2OSQ96PS1 177 aa9.47□□□□□ -0.89
ABCA3-201ENST00000301732 GDF5OSQ5U4N7 250 aa9.47□□□□□ -0.89
ABCA3-201ENST00000301732 SPANXA1Q9NS26 97 aa9.47□□□□□ -0.89
ABCA3-201ENST00000301732 IGLV1-44P01699 117 aa9.46□□□□□ -0.89
ABCA3-201ENST00000301732 VPREB3Q9UKI3 123 aa9.46□□□□□ -0.89
ABCA3-201ENST00000301732 LINC00311Q8N616 119 aa9.46□□□□□ -0.89
ABCA3-201ENST00000301732 CSPG4Q6UVK1 2322 aa9.46□□□□□ -0.89
ABCA3-201ENST00000301732 LINC01548A6NM66 108 aa9.46□□□□□ -0.89
ABCA3-201ENST00000301732 PRM2P04554 102 aa9.46□□□□□ -0.89
ABCA3-201ENST00000301732 COA6Q5JTJ3 125 aaKnown RBP9.46□□□□□ -0.89
ABCA3-201ENST00000301732 NDUFA11Q86Y39 141 aa9.46□□□□□ -0.89
ABCA3-201ENST00000301732 C3orf84H3BNL1 204 aa9.46□□□□□ -0.9
ABCA3-201ENST00000301732 TRBV7-3A0A075B6L6 115 aa9.46□□□□□ -0.9
ABCA3-201ENST00000301732 ZFP36P26651 326 aaKnown RBP9.45□□□□□ -0.9
ABCA3-201ENST00000301732 PROK1P58294 105 aa9.45□□□□□ -0.9
ABCA3-201ENST00000301732 DAZ2Q13117 558 aaKnown RBP9.45□□□□□ -0.9
ABCA3-201ENST00000301732 DAZ4Q86SG3 579 aaKnown RBP9.45□□□□□ -0.9
ABCA3-201ENST00000301732 DAZ3Q9NR90 486 aaKnown RBP9.45□□□□□ -0.9
ABCA3-201ENST00000301732 DENND4AQ7Z401 1863 aa9.45□□□□□ -0.9
ABCA3-201ENST00000301732 TEX22C9J3V5 150 aa9.45□□□□□ -0.9
ABCA3-201ENST00000301732 OBSL1O75147 1896 aa9.45□□□□□ -0.9
ABCA3-201ENST00000301732 E9PLD3 99 aa9.44□□□□□ -0.9
ABCA3-201ENST00000301732 RNF138Q8WVD3 245 aa9.44□□□□□ -0.9
ABCA3-201ENST00000301732 DIRC1Q969H9 104 aa9.44□□□□□ -0.9
ABCA3-201ENST00000301732 LINC00269Q8N2A0 174 aa9.44□□□□□ -0.9
ABCA3-201ENST00000301732 C3orf22Q8N5N4 141 aa9.44□□□□□ -0.9
ABCA3-201ENST00000301732 MGAMO43451 1857 aa9.44□□□□□ -0.9
ABCA3-201ENST00000301732 XAGE1AQ9HD64 81 aa9.44□□□□□ -0.9
ABCA3-201ENST00000301732 IGLV11-55A0A075B6I3 123 aa9.43□□□□□ -0.9
ABCA3-201ENST00000301732 PPDPFQ9H3Y8 114 aa9.43□□□□□ -0.9
ABCA3-201ENST00000301732 IGLV2-14P01704 120 aa9.43□□□□□ -0.9
ABCA3-201ENST00000301732 MAPKAPK5-AS1Q8N8E1 139 aa9.43□□□□□ -0.9
ABCA3-201ENST00000301732 C16orf74Q96GX8 76 aa9.43□□□□□ -0.9
ABCA3-201ENST00000301732 DOPEY1Q5JWR5 2465 aa9.43□□□□□ -0.9
ABCA3-201ENST00000301732 H0YGX0 51 aa9.43□□□□□ -0.9
ABCA3-201ENST00000301732 C16orf54Q6UWD8 224 aa9.43□□□□□ -0.9
ABCA3-201ENST00000301732 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.43□□□□□ -0.9
ABCA3-201ENST00000301732 NDUFA1O15239 70 aa9.43□□□□□ -0.9
ABCA3-201ENST00000301732 Q8N9W7 124 aa9.43□□□□□ -0.9
ABCA3-201ENST00000301732 CCL18P55774 89 aa9.42□□□□□ -0.9
ABCA3-201ENST00000301732 NANOS2P60321 138 aaKnown RBP9.42□□□□□ -0.9
ABCA3-201ENST00000301732 FNDC1Q4ZHG4 1894 aaPredicted RBP9.42□□□□□ -0.9
ABCA3-201ENST00000301732 ZSWIM8A7E2V4 1837 aa9.42□□□□□ -0.9
ABCA3-201ENST00000301732 IGLV3-1P01715 115 aa9.42□□□□□ -0.9
ABCA3-201ENST00000301732 C2orf70A6NJV1 201 aa9.42□□□□□ -0.9
ABCA3-201ENST00000301732 SPART-AS1P0CW21 52 aa9.42□□□□□ -0.9
ABCA3-201ENST00000301732 RETNQ9HD89 108 aa9.42□□□□□ -0.9
ABCA3-201ENST00000301732 DENND4CQ5VZ89 1909 aa9.41□□□□□ -0.9
ABCA3-201ENST00000301732 SEC61GP60059 68 aa9.41□□□□□ -0.9
ABCA3-201ENST00000301732 ZFAND3Q9H8U3 227 aa9.41□□□□□ -0.9
ABCA3-201ENST00000301732 SPINK6Q6UWN8 80 aa9.41□□□□□ -0.9
ABCA3-201ENST00000301732 BPY2O14599 106 aa9.41□□□□□ -0.9
ABCA3-201ENST00000301732 C1orf158Q8N1D5 194 aa9.41□□□□□ -0.9
ABCA3-201ENST00000301732 PCDH15Q96QU1 1955 aa9.41□□□□□ -0.9
ABCA3-201ENST00000301732 IGHV1-58A0A0C4DH39 117 aa9.4□□□□□ -0.9
ABCA3-201ENST00000301732 TMEM190Q8WZ59 177 aa9.4□□□□□ -0.9
ABCA3-201ENST00000301732 CCDC179H3BU77 68 aa9.4□□□□□ -0.9
ABCA3-201ENST00000301732 Q6ZTI0 123 aa9.4□□□□□ -0.9
ABCA3-201ENST00000301732 C5orf56Q8N8D9 126 aa9.4□□□□□ -0.9
ABCA3-201ENST00000301732 A0A0J9YXY3 114 aa9.4□□□□□ -0.9
ABCA3-201ENST00000301732 CASC2Q6XLA1 102 aa9.4□□□□□ -0.91
ABCA3-201ENST00000301732 ARHGAP32A7KAX9 2087 aa9.4□□□□□ -0.91
ABCA3-201ENST00000301732 NOTCH4Q99466 2003 aa9.4□□□□□ -0.91
ABCA3-201ENST00000301732 IGKV1D-37A0A075B6S9 117 aa9.4□□□□□ -0.91
ABCA3-201ENST00000301732 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.91
ABCA3-201ENST00000301732 LINC00467Q9BRT7 94 aa9.39□□□□□ -0.91
ABCA3-201ENST00000301732 IGKV2-28A0A075B6P5 120 aa9.39□□□□□ -0.91
ABCA3-201ENST00000301732 IGKV2D-28P01615 120 aa9.39□□□□□ -0.91
ABCA3-201ENST00000301732 INSL3P51460 131 aa9.39□□□□□ -0.91
ABCA3-201ENST00000301732 FAM19A5Q7Z5A7 132 aaPredicted RBP9.39□□□□□ -0.91
ABCA3-201ENST00000301732 LTBP1Q14766 1721 aa9.38□□□□□ -0.91
ABCA3-201ENST00000301732 COX7BP24311 80 aa9.38□□□□□ -0.91
ABCA3-201ENST00000301732 ODF3L1Q8IXM7 274 aa9.38□□□□□ -0.91
ABCA3-201ENST00000301732 TMEM256-PLSCR3K7ERE1 68 aa9.38□□□□□ -0.91
ABCA3-201ENST00000301732 WFDC13Q8IUB5 93 aa9.38□□□□□ -0.91
ABCA3-201ENST00000301732 MRPL55Q7Z7F7 128 aaKnown RBP9.37□□□□□ -0.91
ABCA3-201ENST00000301732 POU2AF1Q16633 256 aa9.37□□□□□ -0.91
ABCA3-201ENST00000301732 Q8N7P7 452 aa9.37□□□□□ -0.91
ABCA3-201ENST00000301732 CDKN2A-AS1Q9UH64 79 aa9.37□□□□□ -0.91
ABCA3-201ENST00000301732 NLRC5Q86WI3 1866 aa9.37□□□□□ -0.91
ABCA3-201ENST00000301732 FAM236DA0A1B0GTK5 79 aa9.37□□□□□ -0.91
ABCA3-201ENST00000301732 FAM236CP0DP71 79 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 219.5 ms