RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 LY6G5BQ8NDX9 201 aa10.11□□□□□ -0.79
CASC4-201ENST00000299957 ZNRF2Q8NHG8 242 aa10.11□□□□□ -0.79
CASC4-201ENST00000299957 RASL10AQ92737 203 aa10.11□□□□□ -0.79
CASC4-201ENST00000299957 NDUFA12Q9UI09 145 aa10.11□□□□□ -0.79
CASC4-201ENST00000299957 PRIMA1Q86XR5 153 aa10.11□□□□□ -0.79
CASC4-201ENST00000299957 LGALS1P09382 135 aaKnown RBP10.1□□□□□ -0.79
CASC4-201ENST00000299957 DEFB130BP0DP73 79 aa10.1□□□□□ -0.79
CASC4-201ENST00000299957 DEFB130AP0DP74 79 aa10.1□□□□□ -0.79
CASC4-201ENST00000299957 ASH1LQ9NR48 2969 aaKnown RBP10.1□□□□□ -0.79
CASC4-201ENST00000299957 TRGV4A0A0C4DH28 118 aa10.1□□□□□ -0.79
CASC4-201ENST00000299957 ZFAND3Q9H8U3 227 aa10.1□□□□□ -0.79
CASC4-201ENST00000299957 ODF3BA8MYP8 253 aa10.09□□□□□ -0.79
CASC4-201ENST00000299957 LINC00158P58513 81 aa10.09□□□□□ -0.79
CASC4-201ENST00000299957 TNRC6BQ9UPQ9 1833 aaKnown RBP10.09□□□□□ -0.79
CASC4-201ENST00000299957 TRAV8-4A0A0B4J246 113 aa10.09□□□□□ -0.79
CASC4-201ENST00000299957 TRPT1Q86TN4 253 aaKnown RBP10.09□□□□□ -0.79
CASC4-201ENST00000299957 SPAG8Q99932 426 aaPredicted RBP10.09□□□□□ -0.79
CASC4-201ENST00000299957 A0A096LPF7 62 aa10.09□□□□□ -0.79
CASC4-201ENST00000299957 G3V4G9 280 aa10.09□□□□□ -0.79
CASC4-201ENST00000299957 HOXD3P31249 432 aaPredicted RBP10.09□□□□□ -0.79
CASC4-201ENST00000299957 HECTD1Q9ULT8 2610 aa10.09□□□□□ -0.79
CASC4-201ENST00000299957 CHD6Q8TD26 2715 aa10.09□□□□□ -0.79
CASC4-201ENST00000299957 NBL1P41271 181 aa10.08□□□□□ -0.8
CASC4-201ENST00000299957 TMEM190Q8WZ59 177 aa10.08□□□□□ -0.8
CASC4-201ENST00000299957 MUC4Q99102 2169 aa10.08□□□□□ -0.8
CASC4-201ENST00000299957 F8W735 103 aaPredicted RBP10.08□□□□□ -0.8
CASC4-201ENST00000299957 SLC25A20O43772 301 aa10.08□□□□□ -0.8
CASC4-201ENST00000299957 C9orf47Q6ZRZ4 202 aa10.08□□□□□ -0.8
CASC4-201ENST00000299957 C3orf56Q8N813 242 aa10.08□□□□□ -0.8
CASC4-201ENST00000299957 I3L3M4 83 aa10.08□□□□□ -0.8
CASC4-201ENST00000299957 TNFRSF13BO14836 293 aaPredicted RBP10.08□□□□□ -0.8
CASC4-201ENST00000299957 ZFAND6Q6FIF0 208 aa10.08□□□□□ -0.8
CASC4-201ENST00000299957 IGF2-ASQ6U949 168 aa10.08□□□□□ -0.8
CASC4-201ENST00000299957 MUSTN1Q8IVN3 82 aa10.07□□□□□ -0.8
CASC4-201ENST00000299957 PFN2P35080 140 aa10.07□□□□□ -0.8
CASC4-201ENST00000299957 TMEM101Q96IK0 257 aa10.07□□□□□ -0.8
CASC4-201ENST00000299957 A8MZ25 164 aa10.07□□□□□ -0.8
CASC4-201ENST00000299957 PROK1P58294 105 aa10.07□□□□□ -0.8
CASC4-201ENST00000299957 C10orf126Q8N4M7 172 aa10.07□□□□□ -0.8
CASC4-201ENST00000299957 MRPS12O15235 138 aaKnown RBP10.06□□□□□ -0.8
CASC4-201ENST00000299957 COL4A2P08572 1712 aa10.06□□□□□ -0.8
CASC4-201ENST00000299957 CLPSL2Q6UWE3 100 aa10.06□□□□□ -0.8
CASC4-201ENST00000299957 ZFAND2AQ8N6M9 145 aa10.06□□□□□ -0.8
CASC4-201ENST00000299957 PEMTQ9UBM1 199 aa10.06□□□□□ -0.8
CASC4-201ENST00000299957 GAGE7O76087 117 aa10.05□□□□□ -0.8
CASC4-201ENST00000299957 GAGE12FP0CL80 117 aa10.05□□□□□ -0.8
CASC4-201ENST00000299957 GAGE12GP0CL81 117 aa10.05□□□□□ -0.8
CASC4-201ENST00000299957 GAGE12IP0CL82 117 aa10.05□□□□□ -0.8
CASC4-201ENST00000299957 SCGB1A1P11684 91 aa10.05□□□□□ -0.8
CASC4-201ENST00000299957 YAE1D1Q9NRH1 226 aa10.05□□□□□ -0.8
CASC4-201ENST00000299957 ZNF415Q09FC8 603 aa10.05□□□□□ -0.8
CASC4-201ENST00000299957 IGHV4OR15-8A0A075B7B6 117 aa10.05□□□□□ -0.8
CASC4-201ENST00000299957 A0A087WW49 117 aa10.05□□□□□ -0.8
CASC4-201ENST00000299957 TRBV6-1A0A0K0K1D8 114 aa10.05□□□□□ -0.8
CASC4-201ENST00000299957 PAX4O43316 350 aa10.05□□□□□ -0.8
CASC4-201ENST00000299957 PPDPFLQ8WWR9 84 aa10.05□□□□□ -0.8
CASC4-201ENST00000299957 RELNP78509 3460 aa10.04□□□□□ -0.8
CASC4-201ENST00000299957 HHLA3Q9XRX5 114 aa10.04□□□□□ -0.8
CASC4-201ENST00000299957 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.04□□□□□ -0.8
CASC4-201ENST00000299957 PF4P02776 101 aa10.04□□□□□ -0.8
CASC4-201ENST00000299957 CFC1BP0CG36 223 aa10.04□□□□□ -0.8
CASC4-201ENST00000299957 CFC1P0CG37 223 aa10.04□□□□□ -0.8
CASC4-201ENST00000299957 RPL36AP83881 106 aaKnown RBP10.04□□□□□ -0.8
CASC4-201ENST00000299957 RPL36ALQ969Q0 106 aaKnown RBP10.04□□□□□ -0.8
CASC4-201ENST00000299957 TOMM6Q96B49 74 aa10.04□□□□□ -0.8
CASC4-201ENST00000299957 F8P00451 2351 aa10.04□□□□□ -0.8
CASC4-201ENST00000299957 CLPSL1A2RUU4 121 aa10.03□□□□□ -0.8
CASC4-201ENST00000299957 ATXN8Q156A1 80 aa10.03□□□□□ -0.8
CASC4-201ENST00000299957 NRACQ8N912 160 aa10.03□□□□□ -0.8
CASC4-201ENST00000299957 E9PLD3 99 aa10.03□□□□□ -0.8
CASC4-201ENST00000299957 MRPL53Q96EL3 112 aaKnown RBP10.03□□□□□ -0.8
CASC4-201ENST00000299957 TMEM141Q96I45 108 aa10.03□□□□□ -0.8
CASC4-201ENST00000299957 NXPH4O95158 308 aa10.02□□□□□ -0.8
CASC4-201ENST00000299957 ATP6V0BQ99437 205 aa10.02□□□□□ -0.8
CASC4-201ENST00000299957 HIGD1BQ9P298 99 aa10.02□□□□□ -0.8
CASC4-201ENST00000299957 GAGE6Q13070 117 aa10.02□□□□□ -0.81
CASC4-201ENST00000299957 TAL2Q16559 108 aa10.02□□□□□ -0.81
CASC4-201ENST00000299957 LINC01356Q8N9X3 169 aa10.02□□□□□ -0.81
CASC4-201ENST00000299957 U3KQE9 123 aa10.02□□□□□ -0.81
CASC4-201ENST00000299957 ANKRD29Q8N6D5 301 aa10.01□□□□□ -0.81
CASC4-201ENST00000299957 U3KQK5 164 aa10.01□□□□□ -0.81
CASC4-201ENST00000299957 IGHG4P01861 327 aa10.01□□□□□ -0.81
CASC4-201ENST00000299957 CLEC2BQ92478 149 aa10.01□□□□□ -0.81
CASC4-201ENST00000299957 B5MCH6 92 aa10.01□□□□□ -0.81
CASC4-201ENST00000299957 TCL1BO95988 128 aa10.01□□□□□ -0.81
CASC4-201ENST00000299957 ESM1Q9NQ30 184 aa10.01□□□□□ -0.81
CASC4-201ENST00000299957 Q9H8V8 135 aa10□□□□□ -0.81
CASC4-201ENST00000299957 INSP01308 110 aa10□□□□□ -0.81
CASC4-201ENST00000299957 LENEPQ9Y5L5 61 aa10□□□□□ -0.81
CASC4-201ENST00000299957 FOXI1Q12951 378 aa10□□□□□ -0.81
CASC4-201ENST00000299957 CARD19Q96LW7 228 aa10□□□□□ -0.81
CASC4-201ENST00000299957 ITPR1Q14643 2758 aa9.99□□□□□ -0.81
CASC4-201ENST00000299957 MT-ATP8P03928 68 aa9.99□□□□□ -0.81
CASC4-201ENST00000299957 TMEM61Q8N0U2 210 aa9.99□□□□□ -0.81
CASC4-201ENST00000299957 Q96MF0 132 aa9.99□□□□□ -0.81
CASC4-201ENST00000299957 ZNF48Q96MX3 618 aaPredicted RBP9.99□□□□□ -0.81
CASC4-201ENST00000299957 IGHG2P01859 326 aa9.99□□□□□ -0.81
CASC4-201ENST00000299957 RNASE3P12724 160 aaKnown RBP9.99□□□□□ -0.81
CASC4-201ENST00000299957 NOP10Q9NPE3 64 aaKnown RBP9.99□□□□□ -0.81
CASC4-201ENST00000299957 FLNCQ14315 2725 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms