RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 OBSL1O75147 1896 aa10.32□□□□□ -0.76
CHRFAM7A-201ENST00000299847 CHD3Q12873 2000 aaKnown RBP10.32□□□□□ -0.76
CHRFAM7A-201ENST00000299847 MP68P56378 58 aa10.32□□□□□ -0.76
CHRFAM7A-201ENST00000299847 RNASE8Q8TDE3 154 aaKnown RBP10.32□□□□□ -0.76
CHRFAM7A-201ENST00000299847 ZNF106Q9H2Y7 1883 aaKnown RBP10.32□□□□□ -0.76
CHRFAM7A-201ENST00000299847 E9PLD3 99 aa10.31□□□□□ -0.76
CHRFAM7A-201ENST00000299847 CRYGBP07316 175 aa10.31□□□□□ -0.76
CHRFAM7A-201ENST00000299847 ODF1Q14990 250 aa10.31□□□□□ -0.76
CHRFAM7A-201ENST00000299847 Q6ZTI0 123 aa10.31□□□□□ -0.76
CHRFAM7A-201ENST00000299847 CCDC140Q96MF4 163 aa10.31□□□□□ -0.76
CHRFAM7A-201ENST00000299847 IGF1P05019 195 aa10.31□□□□□ -0.76
CHRFAM7A-201ENST00000299847 COL4A3Q01955 1670 aa10.31□□□□□ -0.76
CHRFAM7A-201ENST00000299847 IGLV1-47P01700 117 aa10.31□□□□□ -0.76
CHRFAM7A-201ENST00000299847 LINC00322Q6ZN03 302 aaPredicted RBP10.31□□□□□ -0.76
CHRFAM7A-201ENST00000299847 SCXQ7RTU7 201 aa10.31□□□□□ -0.76
CHRFAM7A-201ENST00000299847 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.3□□□□□ -0.76
CHRFAM7A-201ENST00000299847 GPHB5Q86YW7 130 aa10.3□□□□□ -0.76
CHRFAM7A-201ENST00000299847 SLPIP03973 132 aa10.3□□□□□ -0.76
CHRFAM7A-201ENST00000299847 MYCNOSP40205 109 aa10.3□□□□□ -0.76
CHRFAM7A-201ENST00000299847 CTRLP40313 264 aa10.3□□□□□ -0.76
CHRFAM7A-201ENST00000299847 IGHV1-58A0A0C4DH39 117 aa10.3□□□□□ -0.76
CHRFAM7A-201ENST00000299847 FOXI1Q12951 378 aa10.3□□□□□ -0.76
CHRFAM7A-201ENST00000299847 MED13Q9UHV7 2174 aa10.29□□□□□ -0.76
CHRFAM7A-201ENST00000299847 TMEM263Q8WUH6 116 aaKnown RBP10.29□□□□□ -0.76
CHRFAM7A-201ENST00000299847 A0A0J9YX75 114 aa10.29□□□□□ -0.76
CHRFAM7A-201ENST00000299847 TRBV6-1A0A0K0K1D8 114 aa10.29□□□□□ -0.76
CHRFAM7A-201ENST00000299847 A6NDX4 124 aa10.29□□□□□ -0.76
CHRFAM7A-201ENST00000299847 C20orf173Q96LM9 149 aa10.29□□□□□ -0.76
CHRFAM7A-201ENST00000299847 DENND4AQ7Z401 1863 aa10.29□□□□□ -0.76
CHRFAM7A-201ENST00000299847 TEN1Q86WV5 123 aa10.29□□□□□ -0.76
CHRFAM7A-201ENST00000299847 IGKV1D-37A0A075B6S9 117 aa10.28□□□□□ -0.76
CHRFAM7A-201ENST00000299847 TRAV23DV6A0A075B6W5 121 aa10.28□□□□□ -0.76
CHRFAM7A-201ENST00000299847 C1orf229Q6ZS94 237 aaPredicted RBP10.28□□□□□ -0.76
CHRFAM7A-201ENST00000299847 K7EMT4 169 aa10.28□□□□□ -0.76
CHRFAM7A-201ENST00000299847 Q8NA96 180 aa10.28□□□□□ -0.76
CHRFAM7A-201ENST00000299847 TRBV10-2A0A0K0K1G8 114 aa10.28□□□□□ -0.76
CHRFAM7A-201ENST00000299847 ZGRF1Q86YA3 2104 aa10.28□□□□□ -0.76
CHRFAM7A-201ENST00000299847 HIGD2AQ9BW72 106 aa10.28□□□□□ -0.76
CHRFAM7A-201ENST00000299847 TCL1BO95988 128 aa10.28□□□□□ -0.76
CHRFAM7A-201ENST00000299847 IGKV4-1P06312 121 aa10.28□□□□□ -0.76
CHRFAM7A-201ENST00000299847 C11orf45Q8TAV5 145 aa10.28□□□□□ -0.76
CHRFAM7A-201ENST00000299847 LINC00482Q8N8I6 264 aa10.27□□□□□ -0.76
CHRFAM7A-201ENST00000299847 KLK5Q9Y337 293 aaPredicted RBP10.27□□□□□ -0.77
CHRFAM7A-201ENST00000299847 TNRC6AQ8NDV7 1962 aaKnown RBP10.27□□□□□ -0.77
CHRFAM7A-201ENST00000299847 SPANXDQ9BXN6 97 aa10.27□□□□□ -0.77
CHRFAM7A-201ENST00000299847 COX7BP24311 80 aa10.27□□□□□ -0.77
CHRFAM7A-201ENST00000299847 LINC00467Q9BRT7 94 aa10.27□□□□□ -0.77
CHRFAM7A-201ENST00000299847 C10orf99Q6UWK7 81 aa10.27□□□□□ -0.77
CHRFAM7A-201ENST00000299847 GDF5OSQ5U4N7 250 aa10.26□□□□□ -0.77
CHRFAM7A-201ENST00000299847 ATOX1O00244 68 aa10.26□□□□□ -0.77
CHRFAM7A-201ENST00000299847 PROK1P58294 105 aa10.26□□□□□ -0.77
CHRFAM7A-201ENST00000299847 DCANP1Q8TF63 244 aa10.26□□□□□ -0.77
CHRFAM7A-201ENST00000299847 SVIPQ8NHG7 77 aa10.26□□□□□ -0.77
CHRFAM7A-201ENST00000299847 MALRD1Q5VYJ5 2156 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 Q6ZSR3 168 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 C20orf203Q8NBC4 194 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 C19orf71A6NCJ1 209 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 REG3AQ06141 175 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 LYPD6Q86Y78 171 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 PRO0255Q9UI72 69 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 INAFM1C9JVW0 142 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 DAZAP2Q15038 168 aaPredicted RBP10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 FAM222AQ5U5X8 452 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 NDUFA11Q86Y39 141 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 B9D2Q9BPU9 175 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 PKIGQ9Y2B9 76 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 COA6Q5JTJ3 125 aaKnown RBP10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 C22orf34Q6ZV56 151 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 ZFAND2AQ8N6M9 145 aa10.25□□□□□ -0.77
CHRFAM7A-201ENST00000299847 A0A0J9YWU9 116 aa10.24□□□□□ -0.77
CHRFAM7A-201ENST00000299847 SDIM1Q6ZPB5 146 aa10.24□□□□□ -0.77
CHRFAM7A-201ENST00000299847 UPK3BQ9BT76 320 aa10.23□□□□□ -0.77
CHRFAM7A-201ENST00000299847 FAM19A5Q7Z5A7 132 aaPredicted RBP10.23□□□□□ -0.77
CHRFAM7A-201ENST00000299847 A0A0J9YXY3 114 aa10.23□□□□□ -0.77
CHRFAM7A-201ENST00000299847 TMEM256-PLSCR3K7ERE1 68 aa10.23□□□□□ -0.77
CHRFAM7A-201ENST00000299847 SPATA12Q7Z6I5 190 aa10.23□□□□□ -0.77
CHRFAM7A-201ENST00000299847 MPLKIPQ8TAP9 179 aa10.23□□□□□ -0.77
CHRFAM7A-201ENST00000299847 MIAQ16674 131 aa10.23□□□□□ -0.77
CHRFAM7A-201ENST00000299847 PCNX1Q96RV3 2341 aa10.23□□□□□ -0.77
CHRFAM7A-201ENST00000299847 CRYGDP07320 174 aa10.23□□□□□ -0.77
CHRFAM7A-201ENST00000299847 MED14OSP0DP75 135 aa10.23□□□□□ -0.77
CHRFAM7A-201ENST00000299847 FAM19A1Q7Z5A9 133 aa10.23□□□□□ -0.77
CHRFAM7A-201ENST00000299847 HIGD1BQ9P298 99 aa10.23□□□□□ -0.77
CHRFAM7A-201ENST00000299847 GPR179Q6PRD1 2367 aa10.22□□□□□ -0.77
CHRFAM7A-201ENST00000299847 CXCL5P42830 114 aa10.22□□□□□ -0.77
CHRFAM7A-201ENST00000299847 C2orf16Q68DN1 1984 aa10.22□□□□□ -0.77
CHRFAM7A-201ENST00000299847 IGHV4-31P0DP07 118 aa10.22□□□□□ -0.77
CHRFAM7A-201ENST00000299847 CHCHD10Q8WYQ3 142 aaPredicted RBP10.22□□□□□ -0.77
CHRFAM7A-201ENST00000299847 JMJD7-PLA2G4BH0Y9G9 81 aa10.22□□□□□ -0.77
CHRFAM7A-201ENST00000299847 PIK3CD-AS1Q5SR53 167 aa10.22□□□□□ -0.77
CHRFAM7A-201ENST00000299847 Q6ZPA2 131 aa10.21□□□□□ -0.77
CHRFAM7A-201ENST00000299847 TEX49A0A1B0GTD5 131 aa10.21□□□□□ -0.77
CHRFAM7A-201ENST00000299847 HRCT1Q6UXD1 115 aa10.21□□□□□ -0.77
CHRFAM7A-201ENST00000299847 BRK1Q8WUW1 75 aa10.21□□□□□ -0.77
CHRFAM7A-201ENST00000299847 A0A087WZ39 114 aa10.21□□□□□ -0.78
CHRFAM7A-201ENST00000299847 G3V4G9 280 aa10.21□□□□□ -0.78
CHRFAM7A-201ENST00000299847 IGLV2-8P01709 118 aa10.21□□□□□ -0.78
CHRFAM7A-201ENST00000299847 IGF2-ASQ6U949 168 aa10.21□□□□□ -0.78
CHRFAM7A-201ENST00000299847 MLST8Q9BVC4 326 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms