RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 NDUFV3P56181 108 aaKnown RBP7.61□□□□□ -1.19
FOXN4-201ENST00000299162 KLHL30-AS1Q8NEE0 82 aa7.61□□□□□ -1.19
FOXN4-201ENST00000299162 TMEM190Q8WZ59 177 aa7.61□□□□□ -1.19
FOXN4-201ENST00000299162 IGHV7-4-1A0A0J9YVY3 117 aa7.61□□□□□ -1.19
FOXN4-201ENST00000299162 F5H697 171 aa7.61□□□□□ -1.19
FOXN4-201ENST00000299162 RRN3P1Q2M238 152 aa7.61□□□□□ -1.19
FOXN4-201ENST00000299162 USMG5Q96IX5 58 aa7.61□□□□□ -1.19
FOXN4-201ENST00000299162 IGHV3-64A0A075B6Q5 118 aa7.6□□□□□ -1.19
FOXN4-201ENST00000299162 A0A087WWL8 130 aa7.6□□□□□ -1.19
FOXN4-201ENST00000299162 PRM2P04554 102 aa7.6□□□□□ -1.19
FOXN4-201ENST00000299162 ZNF493Q6ZR52 646 aa7.6□□□□□ -1.19
FOXN4-201ENST00000299162 KLK9Q9UKQ9 250 aa7.6□□□□□ -1.19
FOXN4-201ENST00000299162 LINC01559Q495D7 138 aa7.6□□□□□ -1.19
FOXN4-201ENST00000299162 RPL39LQ96EH5 51 aaKnown RBP7.6□□□□□ -1.19
FOXN4-201ENST00000299162 LINC00477Q96M19 166 aa7.6□□□□□ -1.19
FOXN4-201ENST00000299162 ZNF815PA8K554 130 aa7.6□□□□□ -1.19
FOXN4-201ENST00000299162 C19orf54Q5BKX5 351 aa7.6□□□□□ -1.19
FOXN4-201ENST00000299162 U3KQE9 123 aa7.6□□□□□ -1.19
FOXN4-201ENST00000299162 CD7P09564 240 aa7.59□□□□□ -1.19
FOXN4-201ENST00000299162 SPINK13Q1W4C9 94 aa7.59□□□□□ -1.19
FOXN4-201ENST00000299162 CARD19Q96LW7 228 aa7.59□□□□□ -1.19
FOXN4-201ENST00000299162 IGHV4OR15-8A0A075B7B6 117 aa7.59□□□□□ -1.19
FOXN4-201ENST00000299162 A0A087WW49 117 aa7.59□□□□□ -1.19
FOXN4-201ENST00000299162 SLC25A16P16260 332 aa7.59□□□□□ -1.19
FOXN4-201ENST00000299162 Q1RN00 199 aa7.59□□□□□ -1.19
FOXN4-201ENST00000299162 C9orf47Q6ZRZ4 202 aa7.59□□□□□ -1.19
FOXN4-201ENST00000299162 ZFAND2AQ8N6M9 145 aa7.59□□□□□ -1.19
FOXN4-201ENST00000299162 SLURP1P55000 103 aa7.59□□□□□ -1.2
FOXN4-201ENST00000299162 MEIG1Q5JSS6 88 aa7.59□□□□□ -1.2
FOXN4-201ENST00000299162 SMIM9A6NGZ8 99 aa7.58□□□□□ -1.2
FOXN4-201ENST00000299162 CRLF1O75462 422 aa7.58□□□□□ -1.2
FOXN4-201ENST00000299162 ASIPP42127 132 aa7.58□□□□□ -1.2
FOXN4-201ENST00000299162 SCGB3A1Q96QR1 104 aa7.58□□□□□ -1.2
FOXN4-201ENST00000299162 TRAV21A0A0B4J279 112 aa7.58□□□□□ -1.2
FOXN4-201ENST00000299162 DLX4Q92988 240 aaPredicted RBP7.58□□□□□ -1.2
FOXN4-201ENST00000299162 TRAV4A0A0B4J268 109 aa7.57□□□□□ -1.2
FOXN4-201ENST00000299162 RBAKDNA6NC62 111 aa7.57□□□□□ -1.2
FOXN4-201ENST00000299162 IGLV1-40P01703 118 aa7.57□□□□□ -1.2
FOXN4-201ENST00000299162 IGHV4-31P0DP07 118 aa7.57□□□□□ -1.2
FOXN4-201ENST00000299162 WFDC11Q8NEX6 87 aa7.57□□□□□ -1.2
FOXN4-201ENST00000299162 RHODO00212 210 aa7.57□□□□□ -1.2
FOXN4-201ENST00000299162 NXT2Q9NPJ8 142 aaKnown RBP7.57□□□□□ -1.2
FOXN4-201ENST00000299162 IGHV3-73A0A0B4J1V6 119 aa7.57□□□□□ -1.2
FOXN4-201ENST00000299162 PSMB8P28062 276 aa7.57□□□□□ -1.2
FOXN4-201ENST00000299162 HOXD3P31249 432 aaPredicted RBP7.57□□□□□ -1.2
FOXN4-201ENST00000299162 PLEKHB2Q96CS7 222 aa7.57□□□□□ -1.2
FOXN4-201ENST00000299162 OVOL1O14753 267 aa7.56□□□□□ -1.2
FOXN4-201ENST00000299162 ATP5LO75964 103 aa7.56□□□□□ -1.2
FOXN4-201ENST00000299162 LAGE3Q14657 143 aa7.56□□□□□ -1.2
FOXN4-201ENST00000299162 MUC4Q99102 2169 aa7.56□□□□□ -1.2
FOXN4-201ENST00000299162 KNCNA6PVL3 124 aa7.56□□□□□ -1.2
FOXN4-201ENST00000299162 LINC00694P0DN24 101 aa7.56□□□□□ -1.2
FOXN4-201ENST00000299162 TMEM170BQ5T4T1 132 aa7.56□□□□□ -1.2
FOXN4-201ENST00000299162 PRADC1Q9BSG0 188 aa7.56□□□□□ -1.2
FOXN4-201ENST00000299162 DSCR9P59020 149 aa7.56□□□□□ -1.2
FOXN4-201ENST00000299162 DEFB113Q30KQ7 82 aa7.56□□□□□ -1.2
FOXN4-201ENST00000299162 HIGD1BQ9P298 99 aa7.56□□□□□ -1.2
FOXN4-201ENST00000299162 MYMXA0A1B0GTQ4 84 aa7.55□□□□□ -1.2
FOXN4-201ENST00000299162 SOCS3O14543 225 aa7.55□□□□□ -1.2
FOXN4-201ENST00000299162 U3KQK5 164 aa7.55□□□□□ -1.2
FOXN4-201ENST00000299162 C9JAW5 83 aa7.55□□□□□ -1.2
FOXN4-201ENST00000299162 MORN3Q6PF18 240 aaPredicted RBP7.54□□□□□ -1.2
FOXN4-201ENST00000299162 MDFICQ9P1T7 246 aa7.54□□□□□ -1.2
FOXN4-201ENST00000299162 UNC79Q9P2D8 2635 aa7.54□□□□□ -1.2
FOXN4-201ENST00000299162 IGHV3OR16-12A0A075B7B8 117 aa7.54□□□□□ -1.2
FOXN4-201ENST00000299162 NPC2P61916 151 aa7.54□□□□□ -1.2
FOXN4-201ENST00000299162 SNRPD3P62318 126 aaKnown RBP7.54□□□□□ -1.2
FOXN4-201ENST00000299162 GAGE2BQ13066 116 aa7.54□□□□□ -1.2
FOXN4-201ENST00000299162 GAGE2EQ4V326 116 aa7.54□□□□□ -1.2
FOXN4-201ENST00000299162 TTC32Q5I0X7 151 aa7.54□□□□□ -1.2
FOXN4-201ENST00000299162 COX8CQ7Z4L0 72 aa7.54□□□□□ -1.2
FOXN4-201ENST00000299162 GAGE2DQ9UEU5 116 aa7.54□□□□□ -1.2
FOXN4-201ENST00000299162 ZNF256Q9Y2P7 627 aaPredicted RBP7.54□□□□□ -1.2
FOXN4-201ENST00000299162 TRPT1Q86TN4 253 aaKnown RBP7.54□□□□□ -1.2
FOXN4-201ENST00000299162 A8MWV9 139 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 IFITM1P13164 125 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 CRIP2P52943 208 aaPredicted RBP7.53□□□□□ -1.2
FOXN4-201ENST00000299162 CFAP126Q5VTH2 177 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 ANKRD29Q8N6D5 301 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 DCANP1Q8TF63 244 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 A0A096LNT2 108 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 TCL1BO95988 128 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 LGALS1P09382 135 aaKnown RBP7.53□□□□□ -1.2
FOXN4-201ENST00000299162 DEFB131AP59861 70 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 CFHR3Q02985 330 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 MRPL53Q96EL3 112 aaKnown RBP7.53□□□□□ -1.2
FOXN4-201ENST00000299162 SETXQ7Z333 2677 aaKnown RBP7.53□□□□□ -1.2
FOXN4-201ENST00000299162 WIPF1O43516 503 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 SNCGO76070 127 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 PRSS2P07478 247 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 RNASE3P12724 160 aaKnown RBP7.53□□□□□ -1.2
FOXN4-201ENST00000299162 ZNF56Q15929 161 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 APRG1Q8IVJ8 170 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 Q8N8P6 123 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 NRACQ8N912 160 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 GATD1Q8NB37 220 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 RASL10AQ92737 203 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 ZNF702PQ9H963 129 aa7.53□□□□□ -1.2
FOXN4-201ENST00000299162 CR1P17927 2039 aa7.52□□□□□ -1.21
FOXN4-201ENST00000299162 H3BUA1 57 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms