RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 RNF5Q99942 180 aa11.25□□□□□ -0.61
SPIDR-201ENST00000297423 CCL19Q99731 98 aa11.25□□□□□ -0.61
SPIDR-201ENST00000297423 IGHV3OR16-12A0A075B7B8 117 aa11.24□□□□□ -0.61
SPIDR-201ENST00000297423 CD28P10747 220 aa11.24□□□□□ -0.61
SPIDR-201ENST00000297423 IGHV7-81A0A0B4J1V7 117 aa11.24□□□□□ -0.61
SPIDR-201ENST00000297423 A8MZ25 164 aa11.24□□□□□ -0.61
SPIDR-201ENST00000297423 DGAT2L7PQ6IED9 249 aa11.24□□□□□ -0.61
SPIDR-201ENST00000297423 ASH1LQ9NR48 2969 aaKnown RBP11.24□□□□□ -0.61
SPIDR-201ENST00000297423 PRRC2AP48634 2157 aaKnown RBP11.24□□□□□ -0.61
SPIDR-201ENST00000297423 IGHV3-33P01772 117 aa11.24□□□□□ -0.61
SPIDR-201ENST00000297423 CEMP1Q6PRD7 247 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-201ENST00000297423 KNCNA6PVL3 124 aa11.23□□□□□ -0.61
SPIDR-201ENST00000297423 SLC25A29Q8N8R3 303 aa11.23□□□□□ -0.61
SPIDR-201ENST00000297423 EDA2RQ9HAV5 297 aa11.23□□□□□ -0.61
SPIDR-201ENST00000297423 IGKV3OR2-268A0A0C4DH90 116 aa11.23□□□□□ -0.61
SPIDR-201ENST00000297423 KLK9Q9UKQ9 250 aa11.23□□□□□ -0.61
SPIDR-201ENST00000297423 ZNF462Q96JM2 2506 aa11.23□□□□□ -0.61
SPIDR-201ENST00000297423 ZNRF2Q8NHG8 242 aa11.23□□□□□ -0.61
SPIDR-201ENST00000297423 CNFNQ9BYD5 112 aa11.23□□□□□ -0.61
SPIDR-201ENST00000297423 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-201ENST00000297423 A0A1W2PPR1 153 aa11.22□□□□□ -0.61
SPIDR-201ENST00000297423 UBE2E1P51965 193 aa11.22□□□□□ -0.61
SPIDR-201ENST00000297423 NHLRC4P0CG21 123 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-201ENST00000297423 SUMO4Q6EEV6 95 aa11.22□□□□□ -0.61
SPIDR-201ENST00000297423 ID1P41134 155 aa11.22□□□□□ -0.61
SPIDR-201ENST00000297423 TRIAP1O43715 76 aa11.21□□□□□ -0.61
SPIDR-201ENST00000297423 PPP1R17O96001 155 aa11.21□□□□□ -0.61
SPIDR-201ENST00000297423 COX6B1P14854 86 aa11.21□□□□□ -0.61
SPIDR-201ENST00000297423 ATP5J2P56134 94 aa11.21□□□□□ -0.61
SPIDR-201ENST00000297423 C20orf173Q96LM9 149 aa11.21□□□□□ -0.61
SPIDR-201ENST00000297423 TIMM21Q9BVV7 248 aa11.21□□□□□ -0.61
SPIDR-201ENST00000297423 SVEP1Q4LDE5 3571 aa11.21□□□□□ -0.61
SPIDR-201ENST00000297423 TRGV11A0A075B6L2 103 aa11.21□□□□□ -0.62
SPIDR-201ENST00000297423 BPESC1Q9GZL8 116 aa11.2□□□□□ -0.62
SPIDR-201ENST00000297423 PIMREGQ9BSJ6 248 aa11.19□□□□□ -0.62
SPIDR-201ENST00000297423 TRBV12-3P01733 135 aa11.19□□□□□ -0.62
SPIDR-201ENST00000297423 M0R1W7 72 aa11.19□□□□□ -0.62
SPIDR-201ENST00000297423 CRYGDP07320 174 aa11.19□□□□□ -0.62
SPIDR-201ENST00000297423 ZNF22P17026 224 aaPredicted RBP11.19□□□□□ -0.62
SPIDR-201ENST00000297423 NDUFA12Q9UI09 145 aa11.19□□□□□ -0.62
SPIDR-201ENST00000297423 TRAV41A0A0B4J266 112 aa11.18□□□□□ -0.62
SPIDR-201ENST00000297423 UNQ9165/PRO28630Q6UXU0 137 aa11.18□□□□□ -0.62
SPIDR-201ENST00000297423 PPDPFQ9H3Y8 114 aa11.18□□□□□ -0.62
SPIDR-201ENST00000297423 C9orf139Q6ZV77 190 aa11.18□□□□□ -0.62
SPIDR-201ENST00000297423 TMEM101Q96IK0 257 aa11.18□□□□□ -0.62
SPIDR-201ENST00000297423 IGLV4-69A0A075B6H9 119 aa11.18□□□□□ -0.62
SPIDR-201ENST00000297423 IGHV3-38A0A0C4DH36 116 aa11.18□□□□□ -0.62
SPIDR-201ENST00000297423 TRBV10-2A0A0K0K1G8 114 aa11.18□□□□□ -0.62
SPIDR-201ENST00000297423 CLPSL1A2RUU4 121 aa11.18□□□□□ -0.62
SPIDR-201ENST00000297423 ZNF575Q86XF7 245 aa11.18□□□□□ -0.62
SPIDR-201ENST00000297423 ICOSQ9Y6W8 199 aa11.18□□□□□ -0.62
SPIDR-201ENST00000297423 BRD3OSQ6XYD6 125 aa11.17□□□□□ -0.62
SPIDR-201ENST00000297423 YAE1D1Q9NRH1 226 aa11.17□□□□□ -0.62
SPIDR-201ENST00000297423 GAGE2AQ6NT46 116 aa11.17□□□□□ -0.62
SPIDR-201ENST00000297423 CCDC140Q96MF4 163 aa11.17□□□□□ -0.62
SPIDR-201ENST00000297423 KLK5Q9Y337 293 aaPredicted RBP11.17□□□□□ -0.62
SPIDR-201ENST00000297423 TSHBP01222 138 aa11.16□□□□□ -0.62
SPIDR-201ENST00000297423 SAA4P35542 130 aa11.16□□□□□ -0.62
SPIDR-201ENST00000297423 ZNF843Q8N446 348 aa11.16□□□□□ -0.62
SPIDR-201ENST00000297423 BBC3Q96PG8 261 aaPredicted RBP11.16□□□□□ -0.62
SPIDR-201ENST00000297423 NPBQ8NG41 125 aa11.16□□□□□ -0.62
SPIDR-201ENST00000297423 ZFAND3Q9H8U3 227 aa11.16□□□□□ -0.62
SPIDR-201ENST00000297423 C9orf47Q6ZRZ4 202 aa11.15□□□□□ -0.62
SPIDR-201ENST00000297423 Q8N9W7 124 aa11.15□□□□□ -0.62
SPIDR-201ENST00000297423 FAM110DQ8TAY7 271 aaPredicted RBP11.15□□□□□ -0.62
SPIDR-201ENST00000297423 TMEM141Q96I45 108 aa11.15□□□□□ -0.62
SPIDR-201ENST00000297423 RHPN1-AS1Q9BWJ2 59 aa11.15□□□□□ -0.62
SPIDR-201ENST00000297423 OVOL1O14753 267 aa11.15□□□□□ -0.62
SPIDR-201ENST00000297423 SPINK13Q1W4C9 94 aa11.15□□□□□ -0.62
SPIDR-201ENST00000297423 LOC107984640A0A0U1RRK4 108 aa11.15□□□□□ -0.63
SPIDR-201ENST00000297423 OOSP1A8MZH6 123 aa11.15□□□□□ -0.63
SPIDR-201ENST00000297423 M0QXV9 152 aa11.15□□□□□ -0.63
SPIDR-201ENST00000297423 P0DMU3 169 aa11.15□□□□□ -0.63
SPIDR-201ENST00000297423 FAM231AP0DMU4 169 aa11.15□□□□□ -0.63
SPIDR-201ENST00000297423 FAM231CP0DMU5 169 aa11.15□□□□□ -0.63
SPIDR-201ENST00000297423 HOXD3P31249 432 aaPredicted RBP11.15□□□□□ -0.63
SPIDR-201ENST00000297423 LY6G5BQ8NDX9 201 aa11.15□□□□□ -0.63
SPIDR-201ENST00000297423 TMEM190Q8WZ59 177 aa11.15□□□□□ -0.63
SPIDR-201ENST00000297423 LY6LH3BQJ8 138 aa11.14□□□□□ -0.63
SPIDR-201ENST00000297423 ZFAND2AQ8N6M9 145 aa11.14□□□□□ -0.63
SPIDR-201ENST00000297423 C11orf44Q8N8P7 122 aa11.14□□□□□ -0.63
SPIDR-201ENST00000297423 ODF3Q96PU9 254 aa11.14□□□□□ -0.63
SPIDR-201ENST00000297423 EPG5Q9HCE0 2579 aa11.14□□□□□ -0.63
SPIDR-201ENST00000297423 LEPROTO15243 131 aa11.14□□□□□ -0.63
SPIDR-201ENST00000297423 SRSF2Q01130 221 aaKnown RBP11.14□□□□□ -0.63
SPIDR-201ENST00000297423 TMEM263Q8WUH6 116 aaKnown RBP11.14□□□□□ -0.63
SPIDR-201ENST00000297423 MDFICQ9P1T7 246 aa11.14□□□□□ -0.63
SPIDR-201ENST00000297423 A0A0J9YXY3 114 aa11.13□□□□□ -0.63
SPIDR-201ENST00000297423 LGALS9O00182 355 aa11.13□□□□□ -0.63
SPIDR-201ENST00000297423 SYNJ2BPP57105 145 aa11.13□□□□□ -0.63
SPIDR-201ENST00000297423 TNFRSF18Q9Y5U5 241 aa11.13□□□□□ -0.63
SPIDR-201ENST00000297423 TRAV13-1A0A0B4J241 112 aa11.13□□□□□ -0.63
SPIDR-201ENST00000297423 IGHV3-30-3P0DP02 117 aa11.13□□□□□ -0.63
SPIDR-201ENST00000297423 ZFP36P26651 326 aaKnown RBP11.13□□□□□ -0.63
SPIDR-201ENST00000297423 LINC01619G3V211 115 aa11.12□□□□□ -0.63
SPIDR-201ENST00000297423 RNASE1P07998 156 aaKnown RBP11.12□□□□□ -0.63
SPIDR-201ENST00000297423 LINC00694P0DN24 101 aa11.12□□□□□ -0.63
SPIDR-201ENST00000297423 RNASE3P12724 160 aaKnown RBP11.12□□□□□ -0.63
SPIDR-201ENST00000297423 IGHV3-16A0A0C4DH30 117 aa11.12□□□□□ -0.63
SPIDR-201ENST00000297423 H7C423 109 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms