RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 ZNF876PQ49A33 203 aa10.79□□□□□ -0.68
CCDC140-201ENST00000295226 AMN1Q8IY45 258 aa10.79□□□□□ -0.68
CCDC140-201ENST00000295226 MIEN1Q9BRT3 115 aa10.79□□□□□ -0.68
CCDC140-201ENST00000295226 SPXQ9BT56 116 aa10.79□□□□□ -0.68
CCDC140-201ENST00000295226 JPT2Q9H910 190 aa10.79□□□□□ -0.68
CCDC140-201ENST00000295226 PET117Q6UWS5 81 aa10.79□□□□□ -0.68
CCDC140-201ENST00000295226 MAP1LC3CQ9BXW4 147 aa10.79□□□□□ -0.68
CCDC140-201ENST00000295226 C11orf68Q9H3H3 251 aaKnown RBP10.79□□□□□ -0.68
CCDC140-201ENST00000295226 SPANXN1Q5VSR9 72 aa10.78□□□□□ -0.68
CCDC140-201ENST00000295226 PAM16Q9Y3D7 125 aa10.78□□□□□ -0.68
CCDC140-201ENST00000295226 SPART-AS1P0CW21 52 aa10.77□□□□□ -0.69
CCDC140-201ENST00000295226 SYS1-DBNDD2H3BUS1 97 aa10.76□□□□□ -0.69
CCDC140-201ENST00000295226 NANOS2P60321 138 aaKnown RBP10.76□□□□□ -0.69
CCDC140-201ENST00000295226 RASL10AQ92737 203 aa10.76□□□□□ -0.69
CCDC140-201ENST00000295226 TRAV9-2A0A087WT02 112 aa10.76□□□□□ -0.69
CCDC140-201ENST00000295226 LYRM9A8MSI8 78 aa10.76□□□□□ -0.69
CCDC140-201ENST00000295226 IGHV3-53P01767 116 aa10.76□□□□□ -0.69
CCDC140-201ENST00000295226 C12orf74Q32Q52 190 aa10.76□□□□□ -0.69
CCDC140-201ENST00000295226 SPATA45Q537H7 98 aa10.76□□□□□ -0.69
CCDC140-201ENST00000295226 POM121L12Q8N7R1 296 aa10.76□□□□□ -0.69
CCDC140-201ENST00000295226 RNF185Q96GF1 192 aa10.76□□□□□ -0.69
CCDC140-201ENST00000295226 MAP1LC3AQ9H492 121 aa10.76□□□□□ -0.69
CCDC140-201ENST00000295226 NACAE9PAV3 2078 aa10.75□□□□□ -0.69
CCDC140-201ENST00000295226 TRGV2A0A075B6R0 118 aa10.75□□□□□ -0.69
CCDC140-201ENST00000295226 IGHV3-73A0A0B4J1V6 119 aa10.75□□□□□ -0.69
CCDC140-201ENST00000295226 DAD1P61803 113 aa10.75□□□□□ -0.69
CCDC140-201ENST00000295226 LGALS9BQ3B8N2 356 aa10.75□□□□□ -0.69
CCDC140-201ENST00000295226 SPATA12Q7Z6I5 190 aa10.75□□□□□ -0.69
CCDC140-201ENST00000295226 SYT8Q8NBV8 401 aa10.75□□□□□ -0.69
CCDC140-201ENST00000295226 NXT2Q9NPJ8 142 aaKnown RBP10.75□□□□□ -0.69
CCDC140-201ENST00000295226 UQCR10Q9UDW1 63 aa10.75□□□□□ -0.69
CCDC140-201ENST00000295226 A0A087WWL8 130 aa10.74□□□□□ -0.69
CCDC140-201ENST00000295226 LINC01546A6NGU7 62 aa10.74□□□□□ -0.69
CCDC140-201ENST00000295226 NXPH4O95158 308 aa10.74□□□□□ -0.69
CCDC140-201ENST00000295226 IFI27P40305 119 aaPredicted RBP10.74□□□□□ -0.69
CCDC140-201ENST00000295226 LINC00612Q8N6U2 182 aa10.74□□□□□ -0.69
CCDC140-201ENST00000295226 C11orf45Q8TAV5 145 aa10.74□□□□□ -0.69
CCDC140-201ENST00000295226 C2orf88Q9BSF0 95 aa10.74□□□□□ -0.69
CCDC140-201ENST00000295226 EDA2RQ9HAV5 297 aa10.74□□□□□ -0.69
CCDC140-201ENST00000295226 M0R143 59 aa10.73□□□□□ -0.69
CCDC140-201ENST00000295226 C14orf178Q8N769 122 aaPredicted RBP10.73□□□□□ -0.69
CCDC140-201ENST00000295226 PRSS47A8MTI9 375 aa10.73□□□□□ -0.69
CCDC140-201ENST00000295226 NPYP01303 97 aa10.73□□□□□ -0.69
CCDC140-201ENST00000295226 HBDP02042 147 aa10.73□□□□□ -0.69
CCDC140-201ENST00000295226 EVI2AP22794 236 aa10.73□□□□□ -0.69
CCDC140-201ENST00000295226 CFAP126Q5VTH2 177 aa10.73□□□□□ -0.69
CCDC140-201ENST00000295226 Q6ZTC4 211 aa10.73□□□□□ -0.69
CCDC140-201ENST00000295226 PTH2Q96A98 100 aa10.73□□□□□ -0.69
CCDC140-201ENST00000295226 ZNF479Q96JC4 524 aa10.73□□□□□ -0.69
CCDC140-201ENST00000295226 HTN3P15516 51 aa10.72□□□□□ -0.69
CCDC140-201ENST00000295226 FAM74A4Q5TZK3 123 aa10.72□□□□□ -0.69
CCDC140-201ENST00000295226 OR4C5Q8NGB2 326 aa10.72□□□□□ -0.69
CCDC140-201ENST00000295226 MRAP2Q96G30 205 aa10.72□□□□□ -0.69
CCDC140-201ENST00000295226 LOC389332A0A1B0GUA5 103 aa10.71□□□□□ -0.69
CCDC140-201ENST00000295226 HSBP1L1C9JCN9 74 aa10.71□□□□□ -0.69
CCDC140-201ENST00000295226 RS1O15537 224 aa10.71□□□□□ -0.69
CCDC140-201ENST00000295226 TNFRSF6BO95407 300 aa10.71□□□□□ -0.69
CCDC140-201ENST00000295226 CRYGDP07320 174 aa10.71□□□□□ -0.69
CCDC140-201ENST00000295226 IGLC3P0DOY3 106 aa10.71□□□□□ -0.69
CCDC140-201ENST00000295226 ST20Q9HBF5 79 aa10.71□□□□□ -0.69
CCDC140-201ENST00000295226 LINC01545Q5VT33 79 aa10.7□□□□□ -0.7
CCDC140-201ENST00000295226 TRAV4A0A0B4J268 109 aa10.69□□□□□ -0.7
CCDC140-201ENST00000295226 PPP1R17O96001 155 aa10.69□□□□□ -0.7
CCDC140-201ENST00000295226 Q6ZSN1 163 aa10.69□□□□□ -0.7
CCDC140-201ENST00000295226 KIF25-AS1Q9Y6Z4 181 aa10.69□□□□□ -0.7
CCDC140-201ENST00000295226 TEX48A0A1B0GUV7 120 aa10.69□□□□□ -0.7
CCDC140-201ENST00000295226 A8MWV9 139 aa10.69□□□□□ -0.7
CCDC140-201ENST00000295226 PIK3CD-AS1Q5SR53 167 aa10.69□□□□□ -0.7
CCDC140-201ENST00000295226 Q8N8P6 123 aa10.69□□□□□ -0.7
CCDC140-201ENST00000295226 AP1S3Q96PC3 154 aa10.69□□□□□ -0.7
CCDC140-201ENST00000295226 SMKR1H3BMG3 65 aa10.68□□□□□ -0.7
CCDC140-201ENST00000295226 NCR2O95944 276 aa10.68□□□□□ -0.7
CCDC140-201ENST00000295226 MGPP08493 103 aa10.68□□□□□ -0.7
CCDC140-201ENST00000295226 UFSP1Q6NVU6 142 aa10.68□□□□□ -0.7
CCDC140-201ENST00000295226 LINC00173Q6ZV60 143 aa10.68□□□□□ -0.7
CCDC140-201ENST00000295226 DPH3P1Q9H4G8 78 aa10.68□□□□□ -0.7
CCDC140-201ENST00000295226 A0A096LNJ9 63 aa10.67□□□□□ -0.7
CCDC140-201ENST00000295226 F5H768 121 aa10.67□□□□□ -0.7
CCDC140-201ENST00000295226 K7EMI3 77 aa10.67□□□□□ -0.7
CCDC140-201ENST00000295226 FCER1GP30273 86 aa10.67□□□□□ -0.7
CCDC140-201ENST00000295226 LINC00315P59091 139 aa10.67□□□□□ -0.7
CCDC140-201ENST00000295226 FHL2Q14192 279 aa10.67□□□□□ -0.7
CCDC140-201ENST00000295226 C18orf15Q96N68 181 aa10.67□□□□□ -0.7
CCDC140-201ENST00000295226 DNAH7Q8WXX0 4024 aa10.66□□□□□ -0.7
CCDC140-201ENST00000295226 ATP5G1P05496 136 aa10.66□□□□□ -0.7
CCDC140-201ENST00000295226 SMIM17P0DL12 118 aa10.66□□□□□ -0.7
CCDC140-201ENST00000295226 LGALS9CQ6DKI2 356 aa10.66□□□□□ -0.7
CCDC140-201ENST00000295226 ATOH7Q8N100 152 aa10.66□□□□□ -0.7
CCDC140-201ENST00000295226 TRGV4A0A0C4DH28 118 aa10.66□□□□□ -0.7
CCDC140-201ENST00000295226 F5H697 171 aa10.66□□□□□ -0.7
CCDC140-201ENST00000295226 HNRNPA3P51991 378 aaKnown RBP10.66□□□□□ -0.7
CCDC140-201ENST00000295226 SNHG12Q9BXW3 62 aa10.66□□□□□ -0.7
CCDC140-201ENST00000295226 Q9UF83 564 aa10.66□□□□□ -0.7
CCDC140-201ENST00000295226 MRPS16Q9Y3D3 137 aaKnown RBP10.66□□□□□ -0.7
CCDC140-201ENST00000295226 DEFB131BA0A096LNP1 70 aa10.65□□□□□ -0.7
CCDC140-201ENST00000295226 TRAV26-2A0A0B4J265 109 aa10.65□□□□□ -0.7
CCDC140-201ENST00000295226 ZNF56Q15929 161 aa10.65□□□□□ -0.7
CCDC140-201ENST00000295226 Q6ZN92 141 aa10.65□□□□□ -0.7
CCDC140-201ENST00000295226 NRACQ8N912 160 aa10.65□□□□□ -0.7
CCDC140-201ENST00000295226 IFI27L1Q96BM0 104 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms