RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 RNASE13Q5GAN3 156 aaKnown RBP12.97□□□□□ -0.33
SYVN1-201ENST00000294256 J3QLI3 93 aa12.97□□□□□ -0.33
SYVN1-201ENST00000294256 PPP1R17O96001 155 aa12.97□□□□□ -0.33
SYVN1-201ENST00000294256 ELANEP08246 267 aa12.97□□□□□ -0.33
SYVN1-201ENST00000294256 RPL24P83731 157 aaKnown RBP12.97□□□□□ -0.33
SYVN1-201ENST00000294256 TMEM61Q8N0U2 210 aa12.97□□□□□ -0.33
SYVN1-201ENST00000294256 UBE2E2Q96LR5 201 aa12.97□□□□□ -0.33
SYVN1-201ENST00000294256 Q9UF83 564 aa12.97□□□□□ -0.33
SYVN1-201ENST00000294256 TRBV7-9A0A0J9YWB2 115 aa12.97□□□□□ -0.33
SYVN1-201ENST00000294256 UFSP1Q6NVU6 142 aa12.97□□□□□ -0.33
SYVN1-201ENST00000294256 MORN3Q6PF18 240 aaPredicted RBP12.97□□□□□ -0.33
SYVN1-201ENST00000294256 NOTCH2Q04721 2471 aa12.95□□□□□ -0.34
SYVN1-201ENST00000294256 NXPH4O95158 308 aa12.95□□□□□ -0.34
SYVN1-201ENST00000294256 DEFB113Q30KQ7 82 aa12.95□□□□□ -0.34
SYVN1-201ENST00000294256 C12orf74Q32Q52 190 aa12.95□□□□□ -0.34
SYVN1-201ENST00000294256 DYNLRB2Q8TF09 96 aa12.95□□□□□ -0.34
SYVN1-201ENST00000294256 C9orf85Q96MD7 179 aa12.95□□□□□ -0.34
SYVN1-201ENST00000294256 TENM4Q6N022 2769 aa12.95□□□□□ -0.34
SYVN1-201ENST00000294256 AKAP9Q99996 3911 aa12.95□□□□□ -0.34
SYVN1-201ENST00000294256 M0QY20 66 aa12.95□□□□□ -0.34
SYVN1-201ENST00000294256 RIPPLY3P57055 190 aa12.95□□□□□ -0.34
SYVN1-201ENST00000294256 DLX4Q92988 240 aaPredicted RBP12.95□□□□□ -0.34
SYVN1-201ENST00000294256 CEMP1Q6PRD7 247 aaPredicted RBP12.94□□□□□ -0.34
SYVN1-201ENST00000294256 ZNF479Q96JC4 524 aa12.94□□□□□ -0.34
SYVN1-201ENST00000294256 ZNF580Q9UK33 172 aa12.94□□□□□ -0.34
SYVN1-201ENST00000294256 ITPR2Q14571 2701 aa12.94□□□□□ -0.34
SYVN1-201ENST00000294256 APOMO95445 188 aa12.94□□□□□ -0.34
SYVN1-201ENST00000294256 PMVKQ15126 192 aa12.94□□□□□ -0.34
SYVN1-201ENST00000294256 IGIPA6NJ69 53 aa12.93□□□□□ -0.34
SYVN1-201ENST00000294256 SAMD13Q5VXD3 122 aa12.93□□□□□ -0.34
SYVN1-201ENST00000294256 FOXI2Q6ZQN5 318 aa12.93□□□□□ -0.34
SYVN1-201ENST00000294256 TM2D2Q9BX73 214 aa12.93□□□□□ -0.34
SYVN1-201ENST00000294256 IGLV4-69A0A075B6H9 119 aa12.93□□□□□ -0.34
SYVN1-201ENST00000294256 ZNRF2Q8NHG8 242 aa12.93□□□□□ -0.34
SYVN1-201ENST00000294256 IGLL5B9A064 214 aa12.92□□□□□ -0.34
SYVN1-201ENST00000294256 H3BMG7 143 aa12.92□□□□□ -0.34
SYVN1-201ENST00000294256 RBMY1BA6NDE4 496 aaKnown RBP12.92□□□□□ -0.34
SYVN1-201ENST00000294256 RBMY1EA6NEQ0 496 aaKnown RBP12.92□□□□□ -0.34
SYVN1-201ENST00000294256 E9PLD3 99 aa12.92□□□□□ -0.34
SYVN1-201ENST00000294256 RBMY1DP0C7P1 496 aaKnown RBP12.92□□□□□ -0.34
SYVN1-201ENST00000294256 WFDC11Q8NEX6 87 aa12.92□□□□□ -0.34
SYVN1-201ENST00000294256 PHLDA1Q8WV24 401 aaPredicted RBP12.92□□□□□ -0.34
SYVN1-201ENST00000294256 IGHV3-38A0A0C4DH36 116 aa12.91□□□□□ -0.34
SYVN1-201ENST00000294256 LINC01619G3V211 115 aa12.91□□□□□ -0.34
SYVN1-201ENST00000294256 LGALS9O00182 355 aa12.91□□□□□ -0.34
SYVN1-201ENST00000294256 K7ERU9 68 aa12.91□□□□□ -0.34
SYVN1-201ENST00000294256 LINC01587Q99440 93 aa12.91□□□□□ -0.34
SYVN1-201ENST00000294256 TSPEAR-AS2P59090 65 aa12.91□□□□□ -0.34
SYVN1-201ENST00000294256 XCL2Q9UBD3 114 aa12.9□□□□□ -0.34
SYVN1-201ENST00000294256 TRBV7-3A0A075B6L6 115 aa12.9□□□□□ -0.34
SYVN1-201ENST00000294256 TRBV27A0A0K0K1C4 114 aa12.89□□□□□ -0.35
SYVN1-201ENST00000294256 TRPT1Q86TN4 253 aaKnown RBP12.89□□□□□ -0.35
SYVN1-201ENST00000294256 MRPL16Q9NX20 251 aaKnown RBP12.89□□□□□ -0.35
SYVN1-201ENST00000294256 TMEM89A2RUT3 159 aa12.89□□□□□ -0.35
SYVN1-201ENST00000294256 POM121L12Q8N7R1 296 aa12.89□□□□□ -0.35
SYVN1-201ENST00000294256 SPAG8Q99932 426 aaPredicted RBP12.89□□□□□ -0.35
SYVN1-201ENST00000294256 ADARB2-AS1A8MUL3 147 aa12.88□□□□□ -0.35
SYVN1-201ENST00000294256 H3BMM0 161 aa12.88□□□□□ -0.35
SYVN1-201ENST00000294256 HERVK_113P61574 105 aa12.88□□□□□ -0.35
SYVN1-201ENST00000294256 TRGV11A0A075B6L2 103 aa12.88□□□□□ -0.35
SYVN1-201ENST00000294256 A0A0J9YXV3 536 aa12.88□□□□□ -0.35
SYVN1-201ENST00000294256 PGPEP1Q9NXJ5 209 aa12.88□□□□□ -0.35
SYVN1-201ENST00000294256 LOC107984156A0A0G2JMH3 177 aa12.88□□□□□ -0.35
SYVN1-201ENST00000294256 FSHBP01225 129 aa12.88□□□□□ -0.35
SYVN1-201ENST00000294256 ARL17AQ8IVW1 177 aa12.88□□□□□ -0.35
SYVN1-201ENST00000294256 LINC01549A6NIU2 74 aa12.87□□□□□ -0.35
SYVN1-201ENST00000294256 Q6ZSN1 163 aa12.87□□□□□ -0.35
SYVN1-201ENST00000294256 SETXQ7Z333 2677 aaKnown RBP12.87□□□□□ -0.35
SYVN1-201ENST00000294256 WFDC2Q14508 124 aa12.87□□□□□ -0.35
SYVN1-201ENST00000294256 OR5A1Q8NGJ0 315 aa12.86□□□□□ -0.35
SYVN1-201ENST00000294256 ODF3Q96PU9 254 aa12.86□□□□□ -0.35
SYVN1-201ENST00000294256 I3L3M4 83 aa12.86□□□□□ -0.35
SYVN1-201ENST00000294256 MAP6D1Q9H9H5 199 aa12.86□□□□□ -0.35
SYVN1-201ENST00000294256 CD28P10747 220 aa12.86□□□□□ -0.35
SYVN1-201ENST00000294256 SPXQ9BT56 116 aa12.86□□□□□ -0.35
SYVN1-201ENST00000294256 TNFRSF18Q9Y5U5 241 aa12.86□□□□□ -0.35
SYVN1-201ENST00000294256 SH2D6Q7Z4S9 175 aa12.85□□□□□ -0.35
SYVN1-201ENST00000294256 TMEM141Q96I45 108 aa12.85□□□□□ -0.35
SYVN1-201ENST00000294256 VCX2Q9H322 139 aa12.85□□□□□ -0.35
SYVN1-201ENST00000294256 PEMTQ9UBM1 199 aa12.85□□□□□ -0.35
SYVN1-201ENST00000294256 TEX48A0A1B0GUV7 120 aa12.85□□□□□ -0.35
SYVN1-201ENST00000294256 H7C2G1 150 aa12.85□□□□□ -0.35
SYVN1-201ENST00000294256 LGALS3P17931 250 aaKnown RBP12.85□□□□□ -0.35
SYVN1-201ENST00000294256 HELZ2Q9BYK8 2649 aaKnown RBP12.84□□□□□ -0.35
SYVN1-201ENST00000294256 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.84□□□□□ -0.35
SYVN1-201ENST00000294256 IGKV2-29A2NJV5 120 aaPredicted RBP12.84□□□□□ -0.35
SYVN1-201ENST00000294256 TIMM17AQ99595 171 aa12.84□□□□□ -0.35
SYVN1-201ENST00000294256 IGHV3-53P01767 116 aa12.84□□□□□ -0.35
SYVN1-201ENST00000294256 Q6ZSV7 163 aa12.84□□□□□ -0.35
SYVN1-201ENST00000294256 C20orf203Q8NBC4 194 aa12.84□□□□□ -0.35
SYVN1-201ENST00000294256 TAL2Q16559 108 aa12.83□□□□□ -0.35
SYVN1-201ENST00000294256 TRBV6-5A0A0K0K1A5 114 aa12.83□□□□□ -0.36
SYVN1-201ENST00000294256 J3QQQ9 107 aa12.83□□□□□ -0.36
SYVN1-201ENST00000294256 AZU1P20160 251 aa12.83□□□□□ -0.36
SYVN1-201ENST00000294256 FN1P02751 2386 aaKnown RBP12.83□□□□□ -0.36
SYVN1-201ENST00000294256 RRN3P1Q2M238 152 aa12.83□□□□□ -0.36
SYVN1-201ENST00000294256 RAX2Q96IS3 184 aa12.83□□□□□ -0.36
SYVN1-201ENST00000294256 ETDBQ3ZM63 59 aa12.82□□□□□ -0.36
SYVN1-201ENST00000294256 DEFB114Q30KQ6 69 aa12.82□□□□□ -0.36
SYVN1-201ENST00000294256 A0A0J9YY99 117 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms