RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 TMEM89A2RUT3 159 aa9.53□□□□□ -0.88
SLX4-201ENST00000294008 SNURFQ9Y675 71 aa9.53□□□□□ -0.88
SLX4-201ENST00000294008 IGHV7-81A0A0B4J1V7 117 aa9.53□□□□□ -0.88
SLX4-201ENST00000294008 SPANXCQ9NY87 97 aa9.53□□□□□ -0.88
SLX4-201ENST00000294008 SPRNQ5BIV9 151 aa9.52□□□□□ -0.88
SLX4-201ENST00000294008 C10orf105Q8TEF2 133 aa9.52□□□□□ -0.89
SLX4-201ENST00000294008 PSME4Q14997 1843 aa9.52□□□□□ -0.89
SLX4-201ENST00000294008 ZNF503-AS2A6NEH8 195 aa9.52□□□□□ -0.89
SLX4-201ENST00000294008 C5orf56Q8N8D9 126 aa9.52□□□□□ -0.89
SLX4-201ENST00000294008 TRBV10-1A0A0K0K1A3 114 aa9.52□□□□□ -0.89
SLX4-201ENST00000294008 INSL3P51460 131 aa9.52□□□□□ -0.89
SLX4-201ENST00000294008 FAM215AQ9Y5M1 114 aa9.52□□□□□ -0.89
SLX4-201ENST00000294008 G3V4G9 280 aa9.51□□□□□ -0.89
SLX4-201ENST00000294008 Q6ZTI0 123 aa9.51□□□□□ -0.89
SLX4-201ENST00000294008 C16orf54Q6UWD8 224 aa9.51□□□□□ -0.89
SLX4-201ENST00000294008 PIK3CD-AS1Q5SR53 167 aa9.51□□□□□ -0.89
SLX4-201ENST00000294008 MAP6D1Q9H9H5 199 aa9.51□□□□□ -0.89
SLX4-201ENST00000294008 NDUFV3P56181 108 aaKnown RBP9.51□□□□□ -0.89
SLX4-201ENST00000294008 TRBV6-1A0A0K0K1D8 114 aa9.51□□□□□ -0.89
SLX4-201ENST00000294008 ZFAND2AQ8N6M9 145 aa9.51□□□□□ -0.89
SLX4-201ENST00000294008 PRAC2D3DTV9 90 aa9.5□□□□□ -0.89
SLX4-201ENST00000294008 CCKP06307 115 aa9.5□□□□□ -0.89
SLX4-201ENST00000294008 DSCAML1Q8TD84 2053 aa9.5□□□□□ -0.89
SLX4-201ENST00000294008 LINC00322Q6ZN03 302 aaPredicted RBP9.5□□□□□ -0.89
SLX4-201ENST00000294008 LINC00311Q8N616 119 aa9.5□□□□□ -0.89
SLX4-201ENST00000294008 TCL1BO95988 128 aa9.5□□□□□ -0.89
SLX4-201ENST00000294008 LINC00337Q8N6G1 96 aa9.5□□□□□ -0.89
SLX4-201ENST00000294008 ESRGQ1W209 222 aa9.49□□□□□ -0.89
SLX4-201ENST00000294008 SHISA2Q6UWI4 295 aa9.49□□□□□ -0.89
SLX4-201ENST00000294008 TP53TG3Q9ULZ0 132 aa9.49□□□□□ -0.89
SLX4-201ENST00000294008 GREB1Q4ZG55 1949 aa9.49□□□□□ -0.89
SLX4-201ENST00000294008 IGFL3Q6UXB1 125 aa9.49□□□□□ -0.89
SLX4-201ENST00000294008 TTTY13Q9BZ97 58 aa9.49□□□□□ -0.89
SLX4-201ENST00000294008 COL5A3P25940 1745 aaPredicted RBP9.49□□□□□ -0.89
SLX4-201ENST00000294008 K7EN84 100 aa9.49□□□□□ -0.89
SLX4-201ENST00000294008 ZNF726P1Q15940 193 aa9.49□□□□□ -0.89
SLX4-201ENST00000294008 TRAV10A0A0B4J240 114 aa9.48□□□□□ -0.89
SLX4-201ENST00000294008 PLXNA1Q9UIW2 1896 aa9.48□□□□□ -0.89
SLX4-201ENST00000294008 IGLV5-52A0A0A0MRZ9 124 aa9.48□□□□□ -0.89
SLX4-201ENST00000294008 NANOS2P60321 138 aaKnown RBP9.48□□□□□ -0.89
SLX4-201ENST00000294008 PLA2G2EQ9NZK7 142 aa9.48□□□□□ -0.89
SLX4-201ENST00000294008 NDUFC2-KCTD14E9PQ53 114 aa9.48□□□□□ -0.89
SLX4-201ENST00000294008 C15orf65H3BRN8 121 aa9.48□□□□□ -0.89
SLX4-201ENST00000294008 J3QRE1 110 aa9.47□□□□□ -0.89
SLX4-201ENST00000294008 SYCNQ0VAF6 134 aa9.47□□□□□ -0.89
SLX4-201ENST00000294008 SCN4AP35499 1836 aa9.47□□□□□ -0.89
SLX4-201ENST00000294008 COL24A1Q17RW2 1714 aa9.47□□□□□ -0.89
SLX4-201ENST00000294008 ZNF747Q9BV97 191 aa9.47□□□□□ -0.89
SLX4-201ENST00000294008 SBF2Q86WG5 1849 aa9.47□□□□□ -0.89
SLX4-201ENST00000294008 RBBP6Q7Z6E9 1792 aaKnown RBP9.47□□□□□ -0.89
SLX4-201ENST00000294008 TSC2P49815 1807 aa9.47□□□□□ -0.89
SLX4-201ENST00000294008 QRFPP83859 136 aa9.46□□□□□ -0.89
SLX4-201ENST00000294008 WFDC2Q14508 124 aa9.46□□□□□ -0.89
SLX4-201ENST00000294008 LINC00173Q6ZV60 143 aa9.46□□□□□ -0.9
SLX4-201ENST00000294008 PKDREJQ9NTG1 2253 aa9.46□□□□□ -0.9
SLX4-201ENST00000294008 GVINP1Q7Z2Y8 2422 aa9.46□□□□□ -0.9
SLX4-201ENST00000294008 IGHV6-1A0A0B4J1U7 121 aa9.46□□□□□ -0.9
SLX4-201ENST00000294008 ACACAQ13085 2346 aa9.46□□□□□ -0.9
SLX4-201ENST00000294008 PTPRDP23468 1912 aa9.46□□□□□ -0.9
SLX4-201ENST00000294008 ZNF843Q8N446 348 aa9.46□□□□□ -0.9
SLX4-201ENST00000294008 PDE6GP18545 87 aa9.45□□□□□ -0.9
SLX4-201ENST00000294008 ADORA2A-AS1P86434 159 aa9.45□□□□□ -0.9
SLX4-201ENST00000294008 ARID2Q68CP9 1835 aa9.45□□□□□ -0.9
SLX4-201ENST00000294008 COL11A2P13942 1736 aaPredicted RBP9.45□□□□□ -0.9
SLX4-201ENST00000294008 PTH2Q96A98 100 aa9.45□□□□□ -0.9
SLX4-201ENST00000294008 DENND4AQ7Z401 1863 aa9.45□□□□□ -0.9
SLX4-201ENST00000294008 LY6G6DO95868 133 aa9.45□□□□□ -0.9
SLX4-201ENST00000294008 C20orf144Q9BQM9 153 aa9.45□□□□□ -0.9
SLX4-201ENST00000294008 TMEM223A0PJW6 202 aa9.44□□□□□ -0.9
SLX4-201ENST00000294008 LOC100131303A0A0U1RQF7 123 aa9.44□□□□□ -0.9
SLX4-201ENST00000294008 DAZAP2Q15038 168 aaPredicted RBP9.44□□□□□ -0.9
SLX4-201ENST00000294008 UNQ9165/PRO28630Q6UXU0 137 aa9.44□□□□□ -0.9
SLX4-201ENST00000294008 TRBV27A0A0K0K1C4 114 aa9.44□□□□□ -0.9
SLX4-201ENST00000294008 LINC01545Q5VT33 79 aa9.44□□□□□ -0.9
SLX4-201ENST00000294008 TOMM6Q96B49 74 aa9.43□□□□□ -0.9
SLX4-201ENST00000294008 C11orf86A6NJI1 115 aa9.43□□□□□ -0.9
SLX4-201ENST00000294008 LENEPQ9Y5L5 61 aa9.43□□□□□ -0.9
SLX4-201ENST00000294008 V9GYY9 64 aa9.43□□□□□ -0.9
SLX4-201ENST00000294008 CNOT1A5YKK6 2376 aaKnown RBP9.43□□□□□ -0.9
SLX4-201ENST00000294008 C22orf34Q6ZV56 151 aa9.43□□□□□ -0.9
SLX4-201ENST00000294008 TET1Q8NFU7 2136 aa9.43□□□□□ -0.9
SLX4-201ENST00000294008 MIFP14174 115 aa9.42□□□□□ -0.9
SLX4-201ENST00000294008 C10orf25Q5T742 122 aa9.42□□□□□ -0.9
SLX4-201ENST00000294008 CLUHP3Q96NS8 147 aa9.42□□□□□ -0.9
SLX4-201ENST00000294008 TIMM17BO60830 172 aa9.42□□□□□ -0.9
SLX4-201ENST00000294008 CTRLP40313 264 aa9.42□□□□□ -0.9
SLX4-201ENST00000294008 SPTAN1Q13813 2472 aaKnown RBP9.42□□□□□ -0.9
SLX4-201ENST00000294008 TRBV7-6A0A0J9YX20 115 aa9.42□□□□□ -0.9
SLX4-201ENST00000294008 FXYD2P54710 66 aa9.42□□□□□ -0.9
SLX4-201ENST00000294008 PLXND1Q9Y4D7 1925 aa9.42□□□□□ -0.9
SLX4-201ENST00000294008 LYRM9A8MSI8 78 aa9.42□□□□□ -0.9
SLX4-201ENST00000294008 ADCYAP1P18509 176 aa9.41□□□□□ -0.9
SLX4-201ENST00000294008 PRLHP81277 87 aa9.41□□□□□ -0.9
SLX4-201ENST00000294008 ROS1P08922 2347 aa9.41□□□□□ -0.9
SLX4-201ENST00000294008 BBC3Q96PG8 261 aaPredicted RBP9.41□□□□□ -0.9
SLX4-201ENST00000294008 TNS1Q9HBL0 1735 aaKnown RBP9.41□□□□□ -0.9
SLX4-201ENST00000294008 KPRPQ5T749 579 aaPredicted RBP9.41□□□□□ -0.9
SLX4-201ENST00000294008 Q6ZS49 121 aa9.41□□□□□ -0.9
SLX4-201ENST00000294008 LINC00467Q9BRT7 94 aa9.41□□□□□ -0.9
SLX4-201ENST00000294008 IGLV1-44P01699 117 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms