RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 CRIP3Q6Q6R5 217 aa8.72□□□□□ -1.01
NPC1L1-201ENST00000289547 Q8N976 141 aa8.72□□□□□ -1.01
NPC1L1-201ENST00000289547 SPTBN4Q9H254 2564 aa8.71□□□□□ -1.01
NPC1L1-201ENST00000289547 CRYGBP07316 175 aa8.71□□□□□ -1.01
NPC1L1-201ENST00000289547 SPG11Q96JI7 2443 aa8.71□□□□□ -1.01
NPC1L1-201ENST00000289547 F6UB75 175 aa8.71□□□□□ -1.02
NPC1L1-201ENST00000289547 XGP55808 180 aa8.71□□□□□ -1.02
NPC1L1-201ENST00000289547 LINC00643Q86TS7 51 aa8.71□□□□□ -1.02
NPC1L1-201ENST00000289547 LINC00574Q9H8X3 128 aa8.71□□□□□ -1.02
NPC1L1-201ENST00000289547 RPL32P62910 135 aaKnown RBP8.71□□□□□ -1.02
NPC1L1-201ENST00000289547 NCKAP5O14513 1909 aa8.71□□□□□ -1.02
NPC1L1-201ENST00000289547 LGALS9O00182 355 aa8.7□□□□□ -1.02
NPC1L1-201ENST00000289547 DAND5Q8N907 189 aa8.7□□□□□ -1.02
NPC1L1-201ENST00000289547 ZNRF2Q8NHG8 242 aa8.7□□□□□ -1.02
NPC1L1-201ENST00000289547 BRWD1-AS2P59051 145 aa8.7□□□□□ -1.02
NPC1L1-201ENST00000289547 MAPKAPK5-AS1Q8N8E1 139 aa8.7□□□□□ -1.02
NPC1L1-201ENST00000289547 E7EUB6 86 aa8.7□□□□□ -1.02
NPC1L1-201ENST00000289547 UQCRQO14949 82 aa8.7□□□□□ -1.02
NPC1L1-201ENST00000289547 HERVK_113P63121 156 aa8.7□□□□□ -1.02
NPC1L1-201ENST00000289547 MLST8Q9BVC4 326 aa8.7□□□□□ -1.02
NPC1L1-201ENST00000289547 I3L2K1 104 aa8.7□□□□□ -1.02
NPC1L1-201ENST00000289547 K7EIM0 57 aa8.7□□□□□ -1.02
NPC1L1-201ENST00000289547 TOMM6Q96B49 74 aa8.7□□□□□ -1.02
NPC1L1-201ENST00000289547 CCDC179H3BU77 68 aa8.69□□□□□ -1.02
NPC1L1-201ENST00000289547 DEFB136Q30KP8 78 aa8.69□□□□□ -1.02
NPC1L1-201ENST00000289547 NDUFC2O95298 119 aa8.69□□□□□ -1.02
NPC1L1-201ENST00000289547 DSCR8Q96T75 97 aa8.69□□□□□ -1.02
NPC1L1-201ENST00000289547 TLN1Q9Y490 2541 aaKnown RBP8.69□□□□□ -1.02
NPC1L1-201ENST00000289547 NAV2Q8IVL1 2488 aa8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 PRAC2D3DTV9 90 aa8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 PROP1O75360 226 aa8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 SLURP1P55000 103 aa8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 UFSP1Q6NVU6 142 aa8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 ORMDL1Q9P0S3 153 aa8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 CEP295Q9C0D2 2601 aa8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 SS18Q15532 418 aa8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 SUMO4Q6EEV6 95 aa8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 LENEPQ9Y5L5 61 aa8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 IGKV2-29A2NJV5 120 aaPredicted RBP8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 RITA1Q96K30 269 aa8.68□□□□□ -1.02
NPC1L1-201ENST00000289547 ATP5G1P05496 136 aa8.67□□□□□ -1.02
NPC1L1-201ENST00000289547 ADAMTS20P59510 1910 aa8.67□□□□□ -1.02
NPC1L1-201ENST00000289547 TRAV25A0A0B4J276 109 aa8.67□□□□□ -1.02
NPC1L1-201ENST00000289547 DPH3Q96FX2 82 aa8.67□□□□□ -1.02
NPC1L1-201ENST00000289547 ANKRD11Q6UB99 2663 aaPredicted RBP8.67□□□□□ -1.02
NPC1L1-201ENST00000289547 PIEZO2Q9H5I5 2752 aa8.67□□□□□ -1.02
NPC1L1-201ENST00000289547 PSMB8P28062 276 aa8.67□□□□□ -1.02
NPC1L1-201ENST00000289547 PRR14LQ5THK1 2151 aa8.67□□□□□ -1.02
NPC1L1-201ENST00000289547 BRK1Q8WUW1 75 aa8.66□□□□□ -1.02
NPC1L1-201ENST00000289547 IGFBPL1Q8WX77 278 aa8.66□□□□□ -1.02
NPC1L1-201ENST00000289547 TRAV4A0A0B4J268 109 aa8.66□□□□□ -1.02
NPC1L1-201ENST00000289547 PCNX3Q9H6A9 2034 aa8.66□□□□□ -1.02
NPC1L1-201ENST00000289547 TRBV6-1A0A0K0K1D8 114 aa8.66□□□□□ -1.02
NPC1L1-201ENST00000289547 KIAA1549Q9HCM3 1950 aa8.66□□□□□ -1.02
NPC1L1-201ENST00000289547 IGKV1D-37A0A075B6S9 117 aa8.66□□□□□ -1.02
NPC1L1-201ENST00000289547 CRYGCP07315 174 aa8.66□□□□□ -1.02
NPC1L1-201ENST00000289547 DAD1P61803 113 aa8.65□□□□□ -1.02
NPC1L1-201ENST00000289547 IGLV11-55A0A075B6I3 123 aa8.65□□□□□ -1.02
NPC1L1-201ENST00000289547 Q6ZSV7 163 aa8.65□□□□□ -1.02
NPC1L1-201ENST00000289547 MRPL53Q96EL3 112 aaKnown RBP8.65□□□□□ -1.02
NPC1L1-201ENST00000289547 XCL2Q9UBD3 114 aa8.65□□□□□ -1.02
NPC1L1-201ENST00000289547 SMAD5-AS1Q9Y6J3 95 aa8.65□□□□□ -1.02
NPC1L1-201ENST00000289547 IGHV4OR15-8A0A075B7B6 117 aa8.65□□□□□ -1.02
NPC1L1-201ENST00000289547 A0A087WW49 117 aa8.65□□□□□ -1.02
NPC1L1-201ENST00000289547 SRSF2Q01130 221 aaKnown RBP8.65□□□□□ -1.02
NPC1L1-201ENST00000289547 CFAP126Q5VTH2 177 aa8.65□□□□□ -1.02
NPC1L1-201ENST00000289547 C3orf22Q8N5N4 141 aa8.65□□□□□ -1.02
NPC1L1-201ENST00000289547 TIMM17AQ99595 171 aa8.65□□□□□ -1.02
NPC1L1-201ENST00000289547 CGB3P0DN86 165 aa8.65□□□□□ -1.03
NPC1L1-201ENST00000289547 CGB7P0DN87 165 aa8.65□□□□□ -1.03
NPC1L1-201ENST00000289547 H0YGX0 51 aa8.64□□□□□ -1.03
NPC1L1-201ENST00000289547 A0A1W2PPR1 153 aa8.64□□□□□ -1.03
NPC1L1-201ENST00000289547 hADV29S1A0JD25 119 aa8.64□□□□□ -1.03
NPC1L1-201ENST00000289547 GPHB5Q86YW7 130 aa8.64□□□□□ -1.03
NPC1L1-201ENST00000289547 SND1-IT1Q9HBX3 110 aa8.64□□□□□ -1.03
NPC1L1-201ENST00000289547 IGLV2-23P01705 113 aa8.63□□□□□ -1.03
NPC1L1-201ENST00000289547 ZNF80P51504 273 aaPredicted RBP8.63□□□□□ -1.03
NPC1L1-201ENST00000289547 PKIGQ9Y2B9 76 aa8.63□□□□□ -1.03
NPC1L1-201ENST00000289547 K7EMT4 169 aa8.63□□□□□ -1.03
NPC1L1-201ENST00000289547 CTSGP08311 255 aa8.63□□□□□ -1.03
NPC1L1-201ENST00000289547 SMR3AQ99954 134 aa8.63□□□□□ -1.03
NPC1L1-201ENST00000289547 NDUFA7O95182 113 aa8.63□□□□□ -1.03
NPC1L1-201ENST00000289547 IGF1P05019 195 aa8.63□□□□□ -1.03
NPC1L1-201ENST00000289547 IL17DQ8TAD2 202 aa8.63□□□□□ -1.03
NPC1L1-201ENST00000289547 OPRPNQ99935 248 aaPredicted RBP8.63□□□□□ -1.03
NPC1L1-201ENST00000289547 M0QXV9 152 aa8.62□□□□□ -1.03
NPC1L1-201ENST00000289547 BUB3O43684 328 aa8.62□□□□□ -1.03
NPC1L1-201ENST00000289547 CFHR3Q02985 330 aa8.62□□□□□ -1.03
NPC1L1-201ENST00000289547 EBI3Q14213 229 aa8.62□□□□□ -1.03
NPC1L1-201ENST00000289547 C20orf197Q8N268 126 aa8.62□□□□□ -1.03
NPC1L1-201ENST00000289547 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.62□□□□□ -1.03
NPC1L1-201ENST00000289547 SLC25A29Q8N8R3 303 aa8.62□□□□□ -1.03
NPC1L1-201ENST00000289547 A0A0J9YY99 117 aa8.62□□□□□ -1.03
NPC1L1-201ENST00000289547 LECT2O14960 151 aa8.62□□□□□ -1.03
NPC1L1-201ENST00000289547 MRPS12O15235 138 aaKnown RBP8.62□□□□□ -1.03
NPC1L1-201ENST00000289547 DEFB130BP0DP73 79 aa8.62□□□□□ -1.03
NPC1L1-201ENST00000289547 DEFB130AP0DP74 79 aa8.62□□□□□ -1.03
NPC1L1-201ENST00000289547 Q9HAA7 133 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms