RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 H2AFB1P0C5Y9 115 aa9.19□□□□□ -0.94
TPM1-202ENST00000288398 ZNF345Q14585 488 aa9.19□□□□□ -0.94
TPM1-202ENST00000288398 MIAQ16674 131 aa9.19□□□□□ -0.94
TPM1-202ENST00000288398 MPV17L2Q567V2 206 aa9.19□□□□□ -0.94
TPM1-202ENST00000288398 KRTAP29-1A8MX34 341 aaPredicted RBP9.18□□□□□ -0.94
TPM1-202ENST00000288398 G3V3Q6 166 aa9.18□□□□□ -0.94
TPM1-202ENST00000288398 SMLR1H3BR10 107 aa9.18□□□□□ -0.94
TPM1-202ENST00000288398 OR5AL1P0C617 328 aa9.18□□□□□ -0.94
TPM1-202ENST00000288398 MBD3L1Q8WWY6 194 aa9.18□□□□□ -0.94
TPM1-202ENST00000288398 DAZAP1Q96EP5 407 aaKnown RBP9.18□□□□□ -0.94
TPM1-202ENST00000288398 DERL1Q9BUN8 251 aa9.18□□□□□ -0.94
TPM1-202ENST00000288398 TPPP3Q9BW30 176 aa9.18□□□□□ -0.94
TPM1-202ENST00000288398 hCG_2014768A0A024R1R8 64 aa9.17□□□□□ -0.94
TPM1-202ENST00000288398 TRBV25-1A0A075B6N4 114 aa9.17□□□□□ -0.94
TPM1-202ENST00000288398 A0A0D9SG52 128 aa9.17□□□□□ -0.94
TPM1-202ENST00000288398 H7C1H1 209 aa9.17□□□□□ -0.94
TPM1-202ENST00000288398 SNAI2O43623 268 aa9.17□□□□□ -0.94
TPM1-202ENST00000288398 MGPP08493 103 aa9.17□□□□□ -0.94
TPM1-202ENST00000288398 ENHOQ6UWT2 76 aa9.17□□□□□ -0.94
TPM1-202ENST00000288398 TMUB2Q71RG4 321 aa9.17□□□□□ -0.94
TPM1-202ENST00000288398 CIRBP-AS1Q8TBR5 109 aa9.17□□□□□ -0.94
TPM1-202ENST00000288398 USP17L23D6RBM5 183 aa9.16□□□□□ -0.94
TPM1-202ENST00000288398 TEX46H3BTG2 121 aa9.16□□□□□ -0.94
TPM1-202ENST00000288398 BCL2L11O43521 198 aa9.16□□□□□ -0.94
TPM1-202ENST00000288398 IGLV2-8P01709 118 aa9.16□□□□□ -0.94
TPM1-202ENST00000288398 SSBP4Q9BWG4 385 aaPredicted RBP9.16□□□□□ -0.94
TPM1-202ENST00000288398 MANBALQ9NQG1 85 aa9.16□□□□□ -0.94
TPM1-202ENST00000288398 XKRY2A2RUG3 117 aa9.15□□□□□ -0.94
TPM1-202ENST00000288398 RPL35P42766 123 aaKnown RBP9.15□□□□□ -0.94
TPM1-202ENST00000288398 RPS20P60866 119 aaKnown RBP9.15□□□□□ -0.94
TPM1-202ENST00000288398 GAGE6Q13070 117 aa9.15□□□□□ -0.94
TPM1-202ENST00000288398 CLPSL2Q6UWE3 100 aa9.15□□□□□ -0.94
TPM1-202ENST00000288398 AKAP14Q86UN6 197 aa9.15□□□□□ -0.94
TPM1-202ENST00000288398 TCTE3Q8IZS6 198 aa9.15□□□□□ -0.94
TPM1-202ENST00000288398 MLST8Q9BVC4 326 aa9.15□□□□□ -0.94
TPM1-202ENST00000288398 GNG13Q9P2W3 67 aa9.15□□□□□ -0.94
TPM1-202ENST00000288398 IGHV1-24A0A0C4DH33 117 aa9.14□□□□□ -0.95
TPM1-202ENST00000288398 HMSDA8MTL9 139 aa9.14□□□□□ -0.95
TPM1-202ENST00000288398 RBX1P62877 108 aa9.14□□□□□ -0.95
TPM1-202ENST00000288398 LINC00269Q8N2A0 174 aa9.14□□□□□ -0.95
TPM1-202ENST00000288398 FER1L6-AS1Q8NA97 138 aa9.14□□□□□ -0.95
TPM1-202ENST00000288398 VAX2Q9UIW0 290 aa9.14□□□□□ -0.95
TPM1-202ENST00000288398 RPL37AP61513 92 aaKnown RBP9.13□□□□□ -0.95
TPM1-202ENST00000288398 CACNG7P62955 275 aa9.13□□□□□ -0.95
TPM1-202ENST00000288398 DGAT2L7PQ6IED9 249 aa9.13□□□□□ -0.95
TPM1-202ENST00000288398 OR2D3Q8NGH3 330 aa9.13□□□□□ -0.95
TPM1-202ENST00000288398 DNAH8Q96JB1 4490 aa9.12□□□□□ -0.95
TPM1-202ENST00000288398 CENPWQ5EE01 88 aa9.12□□□□□ -0.95
TPM1-202ENST00000288398 SERTAD4-AS1Q5TG53 156 aa9.12□□□□□ -0.95
TPM1-202ENST00000288398 EIF5AL1Q6IS14 154 aaKnown RBP9.12□□□□□ -0.95
TPM1-202ENST00000288398 UBE2L6O14933 153 aa9.11□□□□□ -0.95
TPM1-202ENST00000288398 OXTP01178 125 aa9.11□□□□□ -0.95
TPM1-202ENST00000288398 IFNA1P01562 189 aa9.11□□□□□ -0.95
TPM1-202ENST00000288398 PRSS1P07477 247 aa9.11□□□□□ -0.95
TPM1-202ENST00000288398 GNG4P50150 75 aa9.11□□□□□ -0.95
TPM1-202ENST00000288398 IQCJQ1A5X6 159 aa9.11□□□□□ -0.95
TPM1-202ENST00000288398 NTM-AS1Q6ZSK4 140 aa9.11□□□□□ -0.95
TPM1-202ENST00000288398 CLRN3Q8NCR9 226 aa9.11□□□□□ -0.95
TPM1-202ENST00000288398 BIN3Q9NQY0 253 aa9.11□□□□□ -0.95
TPM1-202ENST00000288398 AP5S1Q9NUS5 200 aa9.11□□□□□ -0.95
TPM1-202ENST00000288398 F2Z2F3 143 aa9.1□□□□□ -0.95
TPM1-202ENST00000288398 P01737 135 aa9.1□□□□□ -0.95
TPM1-202ENST00000288398 TRGC1P0CF51 173 aa9.1□□□□□ -0.95
TPM1-202ENST00000288398 GZMBP10144 247 aa9.1□□□□□ -0.95
TPM1-202ENST00000288398 RAB5CP51148 216 aa9.1□□□□□ -0.95
TPM1-202ENST00000288398 REG3AQ06141 175 aa9.1□□□□□ -0.95
TPM1-202ENST00000288398 C11orf52Q96A22 123 aa9.1□□□□□ -0.95
TPM1-202ENST00000288398 DPH3Q96FX2 82 aa9.1□□□□□ -0.95
TPM1-202ENST00000288398 TMEM243Q9BU79 118 aa9.1□□□□□ -0.95
TPM1-202ENST00000288398 PRR34Q9NV39 138 aa9.1□□□□□ -0.95
TPM1-202ENST00000288398 KIF25-AS1Q9Y6Z4 181 aa9.1□□□□□ -0.95
TPM1-202ENST00000288398 IGLV10-54A0A075B6I4 117 aa9.09□□□□□ -0.95
TPM1-202ENST00000288398 TRAV8-4A0A0B4J246 113 aa9.09□□□□□ -0.95
TPM1-202ENST00000288398 hDV102S1A0JD36 115 aa9.09□□□□□ -0.95
TPM1-202ENST00000288398 M0QY20 66 aa9.09□□□□□ -0.95
TPM1-202ENST00000288398 NKX2-5P52952 324 aaPredicted RBP9.09□□□□□ -0.95
TPM1-202ENST00000288398 SUMO4Q6EEV6 95 aa9.09□□□□□ -0.95
TPM1-202ENST00000288398 WDR73Q6P4I2 378 aa9.09□□□□□ -0.95
TPM1-202ENST00000288398 RASL11AQ6T310 242 aa9.09□□□□□ -0.95
TPM1-202ENST00000288398 C9orf163Q8N9P6 203 aa9.09□□□□□ -0.95
TPM1-202ENST00000288398 SMIM12Q96EX1 92 aa9.09□□□□□ -0.95
TPM1-202ENST00000288398 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.08□□□□□ -0.96
TPM1-202ENST00000288398 PDE6DO43924 150 aa9.08□□□□□ -0.96
TPM1-202ENST00000288398 DPH3P1Q9H4G8 78 aa9.08□□□□□ -0.96
TPM1-202ENST00000288398 MED9Q9NWA0 146 aa9.08□□□□□ -0.96
TPM1-202ENST00000288398 TRAV1-1A0A0B4J248 108 aa9.07□□□□□ -0.96
TPM1-202ENST00000288398 IGLC6P0CF74 106 aa9.07□□□□□ -0.96
TPM1-202ENST00000288398 SULT1A2P50226 295 aa9.07□□□□□ -0.96
TPM1-202ENST00000288398 CCL20P78556 96 aa9.07□□□□□ -0.96
TPM1-202ENST00000288398 MEF2BQ02080 365 aaPredicted RBP9.07□□□□□ -0.96
TPM1-202ENST00000288398 COTL1Q14019 142 aa9.07□□□□□ -0.96
TPM1-202ENST00000288398 RAB19A4D1S5 217 aa9.06□□□□□ -0.96
TPM1-202ENST00000288398 AMTP48728 403 aa9.06□□□□□ -0.96
TPM1-202ENST00000288398 NIT2Q9NQR4 276 aa9.06□□□□□ -0.96
TPM1-202ENST00000288398 IGHV3-64A0A075B6Q5 118 aa9.05□□□□□ -0.96
TPM1-202ENST00000288398 A0A1B0GUV1 79 aa9.05□□□□□ -0.96
TPM1-202ENST00000288398 C19orf71A6NCJ1 209 aa9.05□□□□□ -0.96
TPM1-202ENST00000288398 KRTAP10-4P60372 401 aaPredicted RBP9.05□□□□□ -0.96
TPM1-202ENST00000288398 TWIST1Q15672 202 aa9.05□□□□□ -0.96
TPM1-202ENST00000288398 LYZL1Q6UWQ5 148 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms