RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 PRO1854Q9UHT4 67 aa9.8□□□□□ -0.84
SLC28A1-201ENST00000286749 IGHV1OR15-1A0A075B7D0 117 aa9.8□□□□□ -0.84
SLC28A1-201ENST00000286749 RHOHQ15669 191 aa9.8□□□□□ -0.84
SLC28A1-201ENST00000286749 ODF3Q96PU9 254 aa9.8□□□□□ -0.84
SLC28A1-201ENST00000286749 CDIP1Q9H305 208 aa9.8□□□□□ -0.84
SLC28A1-201ENST00000286749 CELSR2Q9HCU4 2923 aa9.8□□□□□ -0.84
SLC28A1-201ENST00000286749 TMEM223A0PJW6 202 aa9.79□□□□□ -0.84
SLC28A1-201ENST00000286749 PSMB8P28062 276 aa9.79□□□□□ -0.84
SLC28A1-201ENST00000286749 ATP5J2P56134 94 aa9.79□□□□□ -0.84
SLC28A1-201ENST00000286749 SNRPD3P62318 126 aaKnown RBP9.79□□□□□ -0.84
SLC28A1-201ENST00000286749 FHL3Q13643 280 aa9.79□□□□□ -0.84
SLC28A1-201ENST00000286749 CARD19Q96LW7 228 aa9.79□□□□□ -0.84
SLC28A1-201ENST00000286749 LEPROTO15243 131 aa9.79□□□□□ -0.84
SLC28A1-201ENST00000286749 SCGB1C2P0DMR2 95 aa9.79□□□□□ -0.84
SLC28A1-201ENST00000286749 DOPEY2Q9Y3R5 2298 aa9.79□□□□□ -0.84
SLC28A1-201ENST00000286749 TRBV20-1A0A075B6N2 111 aa9.78□□□□□ -0.84
SLC28A1-201ENST00000286749 A4D1N5 150 aa9.78□□□□□ -0.84
SLC28A1-201ENST00000286749 K7EQG2 157 aa9.78□□□□□ -0.84
SLC28A1-201ENST00000286749 TEN1Q86WV5 123 aa9.78□□□□□ -0.84
SLC28A1-201ENST00000286749 C20orf203Q8NBC4 194 aa9.78□□□□□ -0.84
SLC28A1-201ENST00000286749 A0A0J9YXV3 536 aa9.78□□□□□ -0.84
SLC28A1-201ENST00000286749 ZNF22P17026 224 aaPredicted RBP9.78□□□□□ -0.84
SLC28A1-201ENST00000286749 PPDPFLQ8WWR9 84 aa9.78□□□□□ -0.84
SLC28A1-201ENST00000286749 RAX2Q96IS3 184 aa9.78□□□□□ -0.84
SLC28A1-201ENST00000286749 ZFYVE26Q68DK2 2539 aa9.77□□□□□ -0.84
SLC28A1-201ENST00000286749 A0A1B0GV72 72 aa9.77□□□□□ -0.85
SLC28A1-201ENST00000286749 EIF4EBP3O60516 100 aaPredicted RBP9.77□□□□□ -0.85
SLC28A1-201ENST00000286749 TRAV2A0A0B4J234 112 aa9.77□□□□□ -0.85
SLC28A1-201ENST00000286749 I3L3M4 83 aa9.77□□□□□ -0.85
SLC28A1-201ENST00000286749 RHODO00212 210 aa9.77□□□□□ -0.85
SLC28A1-201ENST00000286749 IGHV4-59P01825 116 aa9.77□□□□□ -0.85
SLC28A1-201ENST00000286749 ZNF580Q9UK33 172 aa9.77□□□□□ -0.85
SLC28A1-201ENST00000286749 IGLV4-3A0A075B6K6 122 aa9.76□□□□□ -0.85
SLC28A1-201ENST00000286749 A8MWV9 139 aa9.76□□□□□ -0.85
SLC28A1-201ENST00000286749 H7C2G1 150 aa9.76□□□□□ -0.85
SLC28A1-201ENST00000286749 SYNJ2BPP57105 145 aa9.76□□□□□ -0.85
SLC28A1-201ENST00000286749 SBSPONQ8IVN8 264 aa9.76□□□□□ -0.85
SLC28A1-201ENST00000286749 MUSTN1Q8IVN3 82 aa9.75□□□□□ -0.85
SLC28A1-201ENST00000286749 ANKRD29Q8N6D5 301 aa9.75□□□□□ -0.85
SLC28A1-201ENST00000286749 DUX5Q96PT3 197 aa9.75□□□□□ -0.85
SLC28A1-201ENST00000286749 VCX2Q9H322 139 aa9.75□□□□□ -0.85
SLC28A1-201ENST00000286749 IGSF10Q6WRI0 2623 aa9.75□□□□□ -0.85
SLC28A1-201ENST00000286749 IGHV3-33P01772 117 aa9.75□□□□□ -0.85
SLC28A1-201ENST00000286749 MT-ATP8P03928 68 aa9.75□□□□□ -0.85
SLC28A1-201ENST00000286749 CKS1BP61024 79 aa9.75□□□□□ -0.85
SLC28A1-201ENST00000286749 TMEM263Q8WUH6 116 aaKnown RBP9.75□□□□□ -0.85
SLC28A1-201ENST00000286749 IGHV3-73A0A0B4J1V6 119 aa9.74□□□□□ -0.85
SLC28A1-201ENST00000286749 SPINK8P0C7L1 97 aa9.74□□□□□ -0.85
SLC28A1-201ENST00000286749 TCTEX1D4Q5JR98 221 aa9.74□□□□□ -0.85
SLC28A1-201ENST00000286749 CRYBA4P53673 196 aa9.74□□□□□ -0.85
SLC28A1-201ENST00000286749 XGP55808 180 aa9.74□□□□□ -0.85
SLC28A1-201ENST00000286749 DEFB112Q30KQ8 113 aa9.74□□□□□ -0.85
SLC28A1-201ENST00000286749 PRRC2AP48634 2157 aaKnown RBP9.73□□□□□ -0.85
SLC28A1-201ENST00000286749 HTN1P15515 57 aa9.73□□□□□ -0.85
SLC28A1-201ENST00000286749 Q6ZUT4 128 aa9.73□□□□□ -0.85
SLC28A1-201ENST00000286749 ADARB2-AS1A8MUL3 147 aa9.73□□□□□ -0.85
SLC28A1-201ENST00000286749 B4DSR2 109 aa9.73□□□□□ -0.85
SLC28A1-201ENST00000286749 RBMY1A1P0DJD3 496 aaKnown RBP9.73□□□□□ -0.85
SLC28A1-201ENST00000286749 RBMY1CP0DJD4 496 aa9.73□□□□□ -0.85
SLC28A1-201ENST00000286749 RBMY1FQ15415 496 aaKnown RBP9.73□□□□□ -0.85
SLC28A1-201ENST00000286749 SPXQ9BT56 116 aa9.73□□□□□ -0.85
SLC28A1-201ENST00000286749 PRORYQ9H606 182 aa9.73□□□□□ -0.85
SLC28A1-201ENST00000286749 ERG28Q9UKR5 140 aa9.73□□□□□ -0.85
SLC28A1-201ENST00000286749 TRGV11A0A075B6L2 103 aa9.72□□□□□ -0.85
SLC28A1-201ENST00000286749 C9JAW5 83 aa9.72□□□□□ -0.85
SLC28A1-201ENST00000286749 CD28P10747 220 aa9.72□□□□□ -0.85
SLC28A1-201ENST00000286749 PROK1P58294 105 aa9.72□□□□□ -0.85
SLC28A1-201ENST00000286749 NACAE9PAV3 2078 aa9.72□□□□□ -0.85
SLC28A1-201ENST00000286749 A0A0B4J2C4 111 aa9.72□□□□□ -0.85
SLC28A1-201ENST00000286749 A0A0J9YXY3 114 aa9.72□□□□□ -0.85
SLC28A1-201ENST00000286749 SLC25A20O43772 301 aa9.72□□□□□ -0.85
SLC28A1-201ENST00000286749 CEMP1Q6PRD7 247 aaPredicted RBP9.72□□□□□ -0.85
SLC28A1-201ENST00000286749 M0R2P5 195 aa9.71□□□□□ -0.85
SLC28A1-201ENST00000286749 IGHV3-30-3P0DP02 117 aa9.71□□□□□ -0.85
SLC28A1-201ENST00000286749 RNASE13Q5GAN3 156 aaKnown RBP9.71□□□□□ -0.85
SLC28A1-201ENST00000286749 FAM104AQ969W3 186 aa9.71□□□□□ -0.85
SLC28A1-201ENST00000286749 CFAP46Q8IYW2 2715 aa9.71□□□□□ -0.85
SLC28A1-201ENST00000286749 Q1RN00 199 aa9.71□□□□□ -0.86
SLC28A1-201ENST00000286749 TIMM21Q9BVV7 248 aa9.71□□□□□ -0.86
SLC28A1-201ENST00000286749 KNCNA6PVL3 124 aa9.7□□□□□ -0.86
SLC28A1-201ENST00000286749 ELANEP08246 267 aa9.7□□□□□ -0.86
SLC28A1-201ENST00000286749 TRAV8-3A0A0A6YYJ7 113 aa9.7□□□□□ -0.86
SLC28A1-201ENST00000286749 PRM2P04554 102 aa9.7□□□□□ -0.86
SLC28A1-201ENST00000286749 HOXD3P31249 432 aaPredicted RBP9.7□□□□□ -0.86
SLC28A1-201ENST00000286749 FLNCQ14315 2725 aa9.7□□□□□ -0.86
SLC28A1-201ENST00000286749 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.69□□□□□ -0.86
SLC28A1-201ENST00000286749 TMEM89A2RUT3 159 aa9.69□□□□□ -0.86
SLC28A1-201ENST00000286749 UTP20O75691 2785 aaKnown RBP9.69□□□□□ -0.86
SLC28A1-201ENST00000286749 NRGNQ92686 78 aa9.69□□□□□ -0.86
SLC28A1-201ENST00000286749 Q9UF83 564 aa9.69□□□□□ -0.86
SLC28A1-201ENST00000286749 PYGO1Q9Y3Y4 419 aa9.69□□□□□ -0.86
SLC28A1-201ENST00000286749 CREBBPQ92793 2442 aa9.69□□□□□ -0.86
SLC28A1-201ENST00000286749 CHD6Q8TD26 2715 aa9.69□□□□□ -0.86
SLC28A1-201ENST00000286749 KMT2BQ9UMN6 2715 aaPredicted RBP9.69□□□□□ -0.86
SLC28A1-201ENST00000286749 MRPS36P82909 103 aaKnown RBP9.69□□□□□ -0.86
SLC28A1-201ENST00000286749 LITAFQ99732 161 aa9.69□□□□□ -0.86
SLC28A1-201ENST00000286749 GEMIN7Q9H840 131 aaKnown RBP9.69□□□□□ -0.86
SLC28A1-201ENST00000286749 BEX4Q9NWD9 120 aaPredicted RBP9.69□□□□□ -0.86
SLC28A1-201ENST00000286749 TNFRSF18Q9Y5U5 241 aa9.68□□□□□ -0.86
SLC28A1-201ENST00000286749 PRSS2P07478 247 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms