RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 TEN1Q86WV5 123 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 CIRBP-AS1Q8TBR5 109 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 R4GMQ9 66 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 SETD2Q9BYW2 2564 aaPredicted RBP3.07□□□□□ -1.92
CD44-202ENST00000278385 SVEP1Q4LDE5 3571 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 PNMA8CA0A1B0GUJ8 204 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 M0R1W7 72 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 PHOX2AO14813 284 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 CUBNO60494 3623 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 IGHV1-69P01742 117 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 PYYP10082 97 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 HLA-DMBP28068 263 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 CAV3P56539 151 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 DEFB112Q30KQ8 113 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 BRD3OSQ6XYD6 125 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 ADM2Q7Z4H4 148 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 HIST3H2BBQ8N257 126 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 OR10P1Q8NGE3 313 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 AQP3Q92482 292 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 PRELID3AQ96N28 172 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 HIST1H2BLQ99880 126 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 UPK3BQ9BT76 320 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 NPCDR1Q9BY65 106 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 GFRA4Q9GZZ7 299 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 OSTCQ9NRP0 149 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 COMMD3Q9UBI1 195 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 HSPE1-MOB4S4R3N1 261 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 NF1P21359 2839 aa3.06□□□□□ -1.92
CD44-202ENST00000278385 JMJD1CQ15652 2540 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 TRGV10A0A0A0MS01 117 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 IGHV1-3A0A0C4DH29 117 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 A8MWP4 228 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 SNRPGP62308 76 aaKnown RBP3.05□□□□□ -1.92
CD44-202ENST00000278385 SYCNQ0VAF6 134 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 PYY3Q5JQD4 70 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 C7orf65Q6ZTY9 151 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 MIR17HGQ75NE6 70 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 VMO1Q7Z5L0 202 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 TTC9CQ8N5M4 171 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 FAM216BQ8N7L0 139 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 GAFA1Q96PS6 74 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 TTTY13Q9BZ97 58 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 TXNL4BQ9NX01 149 aaKnown RBP3.05□□□□□ -1.92
CD44-202ENST00000278385 EPDR1Q9UM22 224 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 MALRD1Q5VYJ5 2156 aa3.05□□□□□ -1.92
CD44-202ENST00000278385 SONP18583 2426 aaKnown RBP3.04□□□□□ -1.92
CD44-202ENST00000278385 IGKV1D-17A0A075B6S4 117 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 TRAV12-2A0A075B6T6 113 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 MDFIC2A0A1B0GVS7 189 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 TMEM223A0PJW6 202 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 CLPSL1A2RUU4 121 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 A6NIN4 97 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 J3QRE1 110 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 M0R129 80 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 CYB5AP00167 134 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 IGKV1D-33P01593 117 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 IGKV1-33P01594 117 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 IGHV3-7P01780 117 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 CD2P06729 351 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 SPINK8P0C7L1 97 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 TRGC1P0CF51 173 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 SNRPD3P62318 126 aaKnown RBP3.04□□□□□ -1.92
CD44-202ENST00000278385 AKR1C1Q04828 323 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 KISS1Q15726 138 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 C10orf91Q5T1B1 145 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 ZFP2Q6ZN57 461 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 GTSCR1Q86UQ5 136 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 BPIFA4PQ86YQ2 179 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 Q8IYB0 196 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 ATOH7Q8N100 152 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 OR4B1Q8NGF8 309 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 RBPMSQ93062 196 aaKnown RBP3.04□□□□□ -1.92
CD44-202ENST00000278385 DIRC1Q969H9 104 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 TTTY10Q9BZA0 68 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 TNFRSF19Q9NS68 423 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 ZNF222Q9UK12 451 aa3.04□□□□□ -1.92
CD44-202ENST00000278385 NSD1Q96L73 2696 aaPredicted RBP3.04□□□□□ -1.92
CD44-202ENST00000278385 TLN2Q9Y4G6 2542 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 NIPBLQ6KC79 2804 aaeCLIP3.03□□□□□ -1.92
CD44-202ENST00000278385 A6NDX4 124 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 C17orf98A8MV24 154 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 C3orf84H3BNL1 204 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 J3QLW9 94 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 LECT2O14960 151 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 SYNGR2O43760 224 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 HRASP01112 189 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 HBDP02042 147 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 RBP4P02753 201 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 ZNF19P17023 458 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 MDKP21741 143 aaPredicted RBP3.03□□□□□ -1.92
CD44-202ENST00000278385 FXYD7P58549 80 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 EIF5AL1Q6IS14 154 aaKnown RBP3.03□□□□□ -1.92
CD44-202ENST00000278385 HCP5Q6MZN7 132 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 SLC35E3Q7Z769 313 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 KCNRGQ8N5I3 272 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 Q8N9W7 124 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 BPIFB6Q8NFQ5 453 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 RHOXF1Q8NHV9 184 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 NAA60Q9H7X0 242 aa3.03□□□□□ -1.92
CD44-202ENST00000278385 ZNRD1Q9P1U0 126 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms