RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 COX8AP10176 69 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 CFAP126Q5VTH2 177 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 ERASQ7Z444 233 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 WFDC10AQ9H1F0 79 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 HHLA3Q9XRX5 114 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 IGHV3-73A0A0B4J1V6 119 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 TRAV12-1A0A0B4J245 112 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 A0A1B0GV90 55 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 LINC01549A6NIU2 74 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 DPM2O94777 84 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 CYSLTR1Q9Y271 337 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 RS1O15537 224 aa6.94□□□□□ -1.3
TRIM55-201ENST00000276573 RPL35AP18077 110 aaKnown RBP6.94□□□□□ -1.3
TRIM55-201ENST00000276573 RIPPLY3P57055 190 aa6.94□□□□□ -1.3
TRIM55-201ENST00000276573 NEXN-AS1Q8NBZ9 246 aa6.94□□□□□ -1.3
TRIM55-201ENST00000276573 DEFB104AQ8WTQ1 72 aa6.94□□□□□ -1.3
TRIM55-201ENST00000276573 MRPL16Q9NX20 251 aaKnown RBP6.94□□□□□ -1.3
TRIM55-201ENST00000276573 MRPL35Q9NZE8 188 aaKnown RBP6.94□□□□□ -1.3
TRIM55-201ENST00000276573 TP73-AS1Q9UF72 201 aa6.94□□□□□ -1.3
TRIM55-201ENST00000276573 I3L3M4 83 aa6.93□□□□□ -1.3
TRIM55-201ENST00000276573 BATFQ16520 125 aa6.93□□□□□ -1.3
TRIM55-201ENST00000276573 Q6ZSN1 163 aa6.93□□□□□ -1.3
TRIM55-201ENST00000276573 IL17DQ8TAD2 202 aa6.93□□□□□ -1.3
TRIM55-201ENST00000276573 SETD2Q9BYW2 2564 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-201ENST00000276573 IGIPA6NJ69 53 aa6.93□□□□□ -1.3
TRIM55-201ENST00000276573 RHODO00212 210 aa6.93□□□□□ -1.3
TRIM55-201ENST00000276573 P0DMU3 169 aa6.93□□□□□ -1.3
TRIM55-201ENST00000276573 FAM231AP0DMU4 169 aa6.93□□□□□ -1.3
TRIM55-201ENST00000276573 FAM231CP0DMU5 169 aa6.93□□□□□ -1.3
TRIM55-201ENST00000276573 RHOHQ15669 191 aa6.93□□□□□ -1.3
TRIM55-201ENST00000276573 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-201ENST00000276573 RNASE8Q8TDE3 154 aaKnown RBP6.93□□□□□ -1.3
TRIM55-201ENST00000276573 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
TRIM55-201ENST00000276573 TP53TG1Q9Y2A0 90 aa6.93□□□□□ -1.3
TRIM55-201ENST00000276573 F8VRH5 84 aa6.92□□□□□ -1.3
TRIM55-201ENST00000276573 TSHBP01222 138 aa6.92□□□□□ -1.3
TRIM55-201ENST00000276573 FGF6P10767 208 aa6.92□□□□□ -1.3
TRIM55-201ENST00000276573 INSL3P51460 131 aa6.92□□□□□ -1.3
TRIM55-201ENST00000276573 RPL39P62891 51 aaKnown RBP6.92□□□□□ -1.3
TRIM55-201ENST00000276573 BOD1L2Q8IYS8 172 aa6.92□□□□□ -1.3
TRIM55-201ENST00000276573 CSNK1G2-AS1Q8NCQ2 148 aa6.92□□□□□ -1.3
TRIM55-201ENST00000276573 TMEM263Q8WUH6 116 aaKnown RBP6.92□□□□□ -1.3
TRIM55-201ENST00000276573 C1QTNF4Q9BXJ3 329 aa6.92□□□□□ -1.3
TRIM55-201ENST00000276573 CHTOPQ9Y3Y2 248 aaKnown RBP6.92□□□□□ -1.3
TRIM55-201ENST00000276573 FN1P02751 2386 aaKnown RBP6.92□□□□□ -1.3
TRIM55-201ENST00000276573 HIVEP1P15822 2718 aa6.92□□□□□ -1.3
TRIM55-201ENST00000276573 PRSS29PA6NIE9 313 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 IGHV3-53P01767 116 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 HINT1P49773 126 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-201ENST00000276573 C9orf66Q5T8R8 295 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 LURAP1LQ8IV03 231 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 TMEM141Q96I45 108 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 CITED1Q99966 193 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 TNFRSF18Q9Y5U5 241 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 DLEU1O43261 78 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 PLNP26678 52 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 TCTAP57738 103 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 ZC2HC1BQ5TFG8 222 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 GTSCR1Q86UQ5 136 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 SPATA3Q8NHX4 192 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 TIMM17AQ99595 171 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 Q9UF83 564 aa6.91□□□□□ -1.3
TRIM55-201ENST00000276573 TRGV1A0A0A0MS02 117 aa6.9□□□□□ -1.3
TRIM55-201ENST00000276573 COL5A1-AS1Q5SY13 56 aa6.9□□□□□ -1.3
TRIM55-201ENST00000276573 C2orf91Q6ZV80 131 aa6.9□□□□□ -1.3
TRIM55-201ENST00000276573 C20orf203Q8NBC4 194 aa6.9□□□□□ -1.3
TRIM55-201ENST00000276573 OR4C5Q8NGB2 326 aa6.9□□□□□ -1.3
TRIM55-201ENST00000276573 DNAJC30Q96LL9 226 aa6.9□□□□□ -1.3
TRIM55-201ENST00000276573 IGKV2D-26A0A0A0MRZ7 120 aa6.89□□□□□ -1.31
TRIM55-201ENST00000276573 SIVA1O15304 175 aa6.89□□□□□ -1.31
TRIM55-201ENST00000276573 NMUP48645 174 aa6.89□□□□□ -1.31
TRIM55-201ENST00000276573 DAZ2Q13117 558 aaKnown RBP6.89□□□□□ -1.31
TRIM55-201ENST00000276573 PMVKQ15126 192 aa6.89□□□□□ -1.31
TRIM55-201ENST00000276573 PCP2Q8IVA1 136 aa6.89□□□□□ -1.31
TRIM55-201ENST00000276573 NSD1Q96L73 2696 aaPredicted RBP6.89□□□□□ -1.31
TRIM55-201ENST00000276573 NACAE9PAV3 2078 aa6.89□□□□□ -1.31
TRIM55-201ENST00000276573 MPV17L2Q567V2 206 aa6.89□□□□□ -1.31
TRIM55-201ENST00000276573 Q6ZTI0 123 aa6.89□□□□□ -1.31
TRIM55-201ENST00000276573 C16orf74Q96GX8 76 aa6.89□□□□□ -1.31
TRIM55-201ENST00000276573 CST9LQ9H4G1 147 aa6.89□□□□□ -1.31
TRIM55-201ENST00000276573 NOP10Q9NPE3 64 aaKnown RBP6.89□□□□□ -1.31
TRIM55-201ENST00000276573 PLAC8L1A1L4L8 177 aa6.88□□□□□ -1.31
TRIM55-201ENST00000276573 RRN3P1Q2M238 152 aa6.88□□□□□ -1.31
TRIM55-201ENST00000276573 C12orf54Q6X4T0 127 aa6.88□□□□□ -1.31
TRIM55-201ENST00000276573 ZNF479Q96JC4 524 aa6.88□□□□□ -1.31
TRIM55-201ENST00000276573 OVOL2Q9BRP0 275 aa6.88□□□□□ -1.31
TRIM55-201ENST00000276573 NIPBLQ6KC79 2804 aaeCLIP6.88□□□□□ -1.31
TRIM55-201ENST00000276573 C2CD3Q4AC94 2353 aa6.88□□□□□ -1.31
TRIM55-201ENST00000276573 TRAV4A0A0B4J268 109 aa6.88□□□□□ -1.31
TRIM55-201ENST00000276573 BVES-AS1Q5T3Y7 98 aa6.88□□□□□ -1.31
TRIM55-201ENST00000276573 WFDC9Q8NEX5 89 aa6.87□□□□□ -1.31
TRIM55-201ENST00000276573 OPRPNQ99935 248 aaPredicted RBP6.87□□□□□ -1.31
TRIM55-201ENST00000276573 TMEM97Q5BJF2 176 aa6.86□□□□□ -1.31
TRIM55-201ENST00000276573 PAPPA-AS1Q5QFB9 102 aa6.86□□□□□ -1.31
TRIM55-201ENST00000276573 TTTY13Q9BZ97 58 aa6.86□□□□□ -1.31
TRIM55-201ENST00000276573 PYGO1Q9Y3Y4 419 aa6.86□□□□□ -1.31
TRIM55-201ENST00000276573 IGLV4-69A0A075B6H9 119 aa6.86□□□□□ -1.31
TRIM55-201ENST00000276573 GAGE12BA1L429 117 aa6.86□□□□□ -1.31
TRIM55-201ENST00000276573 GAGE7O76087 117 aa6.86□□□□□ -1.31
TRIM55-201ENST00000276573 GAGE12FP0CL80 117 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms