RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 MRPL35Q9NZE8 188 aaKnown RBP10.75□□□□□ -0.69
PDLIM2-201ENST00000265810 VPS25Q9BRG1 176 aa10.74□□□□□ -0.69
PDLIM2-201ENST00000265810 Q8N2B8 174 aa10.74□□□□□ -0.69
PDLIM2-201ENST00000265810 CHAC1Q9BUX1 264 aa10.74□□□□□ -0.69
PDLIM2-201ENST00000265810 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.74□□□□□ -0.69
PDLIM2-201ENST00000265810 IGKV2-29A2NJV5 120 aaPredicted RBP10.74□□□□□ -0.69
PDLIM2-201ENST00000265810 GATD1Q8NB37 220 aa10.74□□□□□ -0.69
PDLIM2-201ENST00000265810 ATP5G1P05496 136 aa10.74□□□□□ -0.69
PDLIM2-201ENST00000265810 Q6ZTI0 123 aa10.74□□□□□ -0.69
PDLIM2-201ENST00000265810 LINC00173Q6ZV60 143 aa10.74□□□□□ -0.69
PDLIM2-201ENST00000265810 FLNCQ14315 2725 aa10.73□□□□□ -0.69
PDLIM2-201ENST00000265810 PROK1P58294 105 aa10.73□□□□□ -0.69
PDLIM2-201ENST00000265810 APOMO95445 188 aa10.73□□□□□ -0.69
PDLIM2-201ENST00000265810 PRM2P04554 102 aa10.73□□□□□ -0.69
PDLIM2-201ENST00000265810 GYPEP15421 78 aa10.73□□□□□ -0.69
PDLIM2-201ENST00000265810 C11orf68Q9H3H3 251 aaKnown RBP10.73□□□□□ -0.69
PDLIM2-201ENST00000265810 LOC400499M0QZD8 3231 aa10.73□□□□□ -0.69
PDLIM2-201ENST00000265810 KLLNB2CW77 178 aa10.73□□□□□ -0.69
PDLIM2-201ENST00000265810 K7EQD1 137 aa10.73□□□□□ -0.69
PDLIM2-201ENST00000265810 DLEU1O43261 78 aa10.73□□□□□ -0.69
PDLIM2-201ENST00000265810 ODF3L2Q3SX64 289 aa10.72□□□□□ -0.69
PDLIM2-201ENST00000265810 YPEL4Q96NS1 127 aa10.72□□□□□ -0.69
PDLIM2-201ENST00000265810 DKK2Q9UBU2 259 aa10.72□□□□□ -0.69
PDLIM2-201ENST00000265810 GTF2H5Q6ZYL4 71 aa10.72□□□□□ -0.69
PDLIM2-201ENST00000265810 COPS9Q8WXC6 57 aa10.72□□□□□ -0.69
PDLIM2-201ENST00000265810 LGALS9BQ3B8N2 356 aa10.72□□□□□ -0.69
PDLIM2-201ENST00000265810 OXLD1Q5BKU9 147 aa10.72□□□□□ -0.69
PDLIM2-201ENST00000265810 LGALS9CQ6DKI2 356 aa10.72□□□□□ -0.69
PDLIM2-201ENST00000265810 ZFP2Q6ZN57 461 aa10.71□□□□□ -0.69
PDLIM2-201ENST00000265810 ADGRG4Q8IZF6 3080 aa10.71□□□□□ -0.69
PDLIM2-201ENST00000265810 K7EMI3 77 aa10.71□□□□□ -0.69
PDLIM2-201ENST00000265810 SS18Q15532 418 aa10.71□□□□□ -0.69
PDLIM2-201ENST00000265810 SMIM13P0DJ93 91 aa10.71□□□□□ -0.7
PDLIM2-201ENST00000265810 OR13C6PQ8NH95 151 aa10.71□□□□□ -0.7
PDLIM2-201ENST00000265810 HHLA3Q9XRX5 114 aa10.71□□□□□ -0.7
PDLIM2-201ENST00000265810 PLEKHB2Q96CS7 222 aa10.7□□□□□ -0.7
PDLIM2-201ENST00000265810 DNAJC30Q96LL9 226 aa10.7□□□□□ -0.7
PDLIM2-201ENST00000265810 TIMM21Q9BVV7 248 aa10.7□□□□□ -0.7
PDLIM2-201ENST00000265810 F8VRH5 84 aa10.7□□□□□ -0.7
PDLIM2-201ENST00000265810 PRSS29PA6NIE9 313 aa10.7□□□□□ -0.7
PDLIM2-201ENST00000265810 IGLV1-51P01701 117 aa10.7□□□□□ -0.7
PDLIM2-201ENST00000265810 CDPF1Q6NVV7 123 aa10.7□□□□□ -0.7
PDLIM2-201ENST00000265810 TRBV7-3A0A075B6L6 115 aa10.69□□□□□ -0.7
PDLIM2-201ENST00000265810 RASL10AQ92737 203 aa10.69□□□□□ -0.7
PDLIM2-201ENST00000265810 DPH3Q96FX2 82 aa10.69□□□□□ -0.7
PDLIM2-201ENST00000265810 P0DMU3 169 aa10.69□□□□□ -0.7
PDLIM2-201ENST00000265810 FAM231AP0DMU4 169 aa10.69□□□□□ -0.7
PDLIM2-201ENST00000265810 FAM231CP0DMU5 169 aa10.69□□□□□ -0.7
PDLIM2-201ENST00000265810 SOCS3O14543 225 aa10.69□□□□□ -0.7
PDLIM2-201ENST00000265810 COX6CP09669 75 aa10.69□□□□□ -0.7
PDLIM2-201ENST00000265810 FABP2P12104 132 aa10.69□□□□□ -0.7
PDLIM2-201ENST00000265810 RNASE3P12724 160 aaKnown RBP10.69□□□□□ -0.7
PDLIM2-201ENST00000265810 RPL39P62891 51 aaKnown RBP10.69□□□□□ -0.7
PDLIM2-201ENST00000265810 C6orf226Q5I0X4 101 aa10.69□□□□□ -0.7
PDLIM2-201ENST00000265810 ATP6V0E2Q8NHE4 81 aa10.69□□□□□ -0.7
PDLIM2-201ENST00000265810 NHP2Q9NX24 153 aaKnown RBP10.68□□□□□ -0.7
PDLIM2-201ENST00000265810 EREGO14944 169 aa10.68□□□□□ -0.7
PDLIM2-201ENST00000265810 CKS1BP61024 79 aa10.68□□□□□ -0.7
PDLIM2-201ENST00000265810 CLPSL2Q6UWE3 100 aa10.68□□□□□ -0.7
PDLIM2-201ENST00000265810 GAGE10A6NGK3 116 aa10.67□□□□□ -0.7
PDLIM2-201ENST00000265810 ANGP03950 147 aaKnown RBP10.67□□□□□ -0.7
PDLIM2-201ENST00000265810 ANKRD39Q53RE8 183 aa10.67□□□□□ -0.7
PDLIM2-201ENST00000265810 MAJINQ3KP22 176 aa10.67□□□□□ -0.7
PDLIM2-201ENST00000265810 LINC00158P58513 81 aa10.67□□□□□ -0.7
PDLIM2-201ENST00000265810 FAM222AQ5U5X8 452 aa10.67□□□□□ -0.7
PDLIM2-201ENST00000265810 ZNF479Q96JC4 524 aa10.67□□□□□ -0.7
PDLIM2-201ENST00000265810 ZNF625Q96I27 306 aaPredicted RBP10.67□□□□□ -0.7
PDLIM2-201ENST00000265810 DAZ2Q13117 558 aaKnown RBP10.66□□□□□ -0.7
PDLIM2-201ENST00000265810 DAZ4Q86SG3 579 aaKnown RBP10.66□□□□□ -0.7
PDLIM2-201ENST00000265810 DAZ3Q9NR90 486 aaKnown RBP10.66□□□□□ -0.7
PDLIM2-201ENST00000265810 TRAV4A0A0B4J268 109 aa10.66□□□□□ -0.7
PDLIM2-201ENST00000265810 TEX48A0A1B0GUV7 120 aa10.66□□□□□ -0.7
PDLIM2-201ENST00000265810 ESDP10768 282 aa10.66□□□□□ -0.7
PDLIM2-201ENST00000265810 NPC2P61916 151 aa10.66□□□□□ -0.7
PDLIM2-201ENST00000265810 MRPL23Q16540 153 aaKnown RBP10.66□□□□□ -0.7
PDLIM2-201ENST00000265810 COL12A1Q99715 3063 aa10.66□□□□□ -0.7
PDLIM2-201ENST00000265810 PRIMA1Q86XR5 153 aa10.65□□□□□ -0.7
PDLIM2-201ENST00000265810 KRTAP1-3Q8IUG1 177 aa10.65□□□□□ -0.7
PDLIM2-201ENST00000265810 HSD52Q0P140 79 aa10.65□□□□□ -0.7
PDLIM2-201ENST00000265810 MPV17L2Q567V2 206 aa10.65□□□□□ -0.7
PDLIM2-201ENST00000265810 TDRG1Q3Y452 100 aa10.65□□□□□ -0.71
PDLIM2-201ENST00000265810 ORAOV1Q8WV07 137 aa10.65□□□□□ -0.71
PDLIM2-201ENST00000265810 RPL24P83731 157 aaKnown RBP10.64□□□□□ -0.71
PDLIM2-201ENST00000265810 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
PDLIM2-201ENST00000265810 FAM110AQ9BQ89 295 aa10.64□□□□□ -0.71
PDLIM2-201ENST00000265810 SMIM9A6NGZ8 99 aa10.64□□□□□ -0.71
PDLIM2-201ENST00000265810 RNF185Q96GF1 192 aa10.64□□□□□ -0.71
PDLIM2-201ENST00000265810 PRO0255Q9UI72 69 aa10.64□□□□□ -0.71
PDLIM2-201ENST00000265810 J3QR89 54 aa10.63□□□□□ -0.71
PDLIM2-201ENST00000265810 IGLC3P0DOY3 106 aa10.63□□□□□ -0.71
PDLIM2-201ENST00000265810 SNHG12Q9BXW3 62 aa10.63□□□□□ -0.71
PDLIM2-201ENST00000265810 ICOSQ9Y6W8 199 aa10.63□□□□□ -0.71
PDLIM2-201ENST00000265810 TMEM238C9JI98 176 aa10.63□□□□□ -0.71
PDLIM2-201ENST00000265810 AGRNO00468 2067 aa10.63□□□□□ -0.71
PDLIM2-201ENST00000265810 SPANXA1Q9NS26 97 aa10.63□□□□□ -0.71
PDLIM2-201ENST00000265810 ATRQ13535 2644 aa10.63□□□□□ -0.71
PDLIM2-201ENST00000265810 MYMXA0A1B0GTQ4 84 aa10.62□□□□□ -0.71
PDLIM2-201ENST00000265810 CIDEAO60543 219 aa10.62□□□□□ -0.71
PDLIM2-201ENST00000265810 PRB2P02812 416 aaPredicted RBP10.62□□□□□ -0.71
PDLIM2-201ENST00000265810 RPL13AP40429 203 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms