RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TRBV10-2A0A0K0K1G8 114 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 HES1Q14469 280 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 TMEM200BQ69YZ2 307 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 COX8CQ7Z4L0 72 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 HECTD1Q9ULT8 2610 aa6.63□□□□□ -1.35
VAPB-201ENST00000265619 TINCRA0A1B0GVN0 87 aa6.63□□□□□ -1.35
VAPB-201ENST00000265619 VMA21Q3ZAQ7 101 aa6.63□□□□□ -1.35
VAPB-201ENST00000265619 CSMD2Q7Z408 3487 aa6.63□□□□□ -1.35
VAPB-201ENST00000265619 ACANP16112 2415 aa6.63□□□□□ -1.35
VAPB-201ENST00000265619 HERVK_113P61574 105 aa6.63□□□□□ -1.35
VAPB-201ENST00000265619 RPL39P62891 51 aaKnown RBP6.63□□□□□ -1.35
VAPB-201ENST00000265619 NSUN5P1Q3KNT7 163 aa6.63□□□□□ -1.35
VAPB-201ENST00000265619 HELZ2Q9BYK8 2649 aaKnown RBP6.63□□□□□ -1.35
VAPB-201ENST00000265619 ADARB2-AS1A8MUL3 147 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 ATXN8Q156A1 80 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 PRORYQ9H606 182 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 J3KT08 172 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 PKIGQ9Y2B9 76 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 IGHV3OR16-13A0A075B7E8 117 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 IGHV3-74A0A0B4J1X5 117 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 TMEM178BH3BS89 294 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 IGF1P05019 195 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 P0DMU3 169 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 FAM231AP0DMU4 169 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 FAM231CP0DMU5 169 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 TMEM170BQ5T4T1 132 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 HRCT1Q6UXD1 115 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 NUP37Q8NFH4 326 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
VAPB-201ENST00000265619 ZANQ9Y493 2812 aa6.62□□□□□ -1.35
VAPB-201ENST00000265619 MYO9AB2RTY4 2548 aa6.61□□□□□ -1.35
VAPB-201ENST00000265619 PRRC2AP48634 2157 aaKnown RBP6.61□□□□□ -1.35
VAPB-201ENST00000265619 hADV29S1A0JD25 119 aa6.61□□□□□ -1.35
VAPB-201ENST00000265619 TEX36Q5VZQ5 186 aa6.61□□□□□ -1.35
VAPB-201ENST00000265619 ABCA2Q9BZC7 2435 aa6.61□□□□□ -1.35
VAPB-201ENST00000265619 MTORP42345 2549 aa6.61□□□□□ -1.35
VAPB-201ENST00000265619 IGHV3OR16-10A0A075B7F0 116 aa6.61□□□□□ -1.35
VAPB-201ENST00000265619 IGHV3-66A0A0C4DH42 116 aa6.61□□□□□ -1.35
VAPB-201ENST00000265619 UBE2E1P51965 193 aa6.61□□□□□ -1.35
VAPB-201ENST00000265619 NPC2P61916 151 aa6.61□□□□□ -1.35
VAPB-201ENST00000265619 C2orf48Q96LS8 159 aa6.61□□□□□ -1.35
VAPB-201ENST00000265619 A0A1W2PPR1 153 aa6.61□□□□□ -1.35
VAPB-201ENST00000265619 TMEM89A2RUT3 159 aa6.61□□□□□ -1.35
VAPB-201ENST00000265619 SUMO2P61956 95 aaKnown RBP6.61□□□□□ -1.35
VAPB-201ENST00000265619 F8W735 103 aaPredicted RBP6.6□□□□□ -1.35
VAPB-201ENST00000265619 PRR9Q5T870 116 aa6.6□□□□□ -1.35
VAPB-201ENST00000265619 LINC00526Q96FQ7 95 aa6.6□□□□□ -1.35
VAPB-201ENST00000265619 METTL26Q96S19 204 aa6.6□□□□□ -1.35
VAPB-201ENST00000265619 J3QQQ9 107 aa6.6□□□□□ -1.35
VAPB-201ENST00000265619 SPANXN1Q5VSR9 72 aa6.6□□□□□ -1.35
VAPB-201ENST00000265619 DSCR8Q96T75 97 aa6.6□□□□□ -1.35
VAPB-201ENST00000265619 M0R381 172 aa6.59□□□□□ -1.35
VAPB-201ENST00000265619 BBC3Q96PG8 261 aaPredicted RBP6.59□□□□□ -1.35
VAPB-201ENST00000265619 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
VAPB-201ENST00000265619 FAM110DQ8TAY7 271 aaPredicted RBP6.59□□□□□ -1.35
VAPB-201ENST00000265619 RETNQ9HD89 108 aa6.59□□□□□ -1.35
VAPB-201ENST00000265619 MUC4Q99102 2169 aa6.59□□□□□ -1.35
VAPB-201ENST00000265619 TMEM223A0PJW6 202 aa6.59□□□□□ -1.35
VAPB-201ENST00000265619 UQCRQO14949 82 aa6.59□□□□□ -1.35
VAPB-201ENST00000265619 PDE6HQ13956 83 aa6.59□□□□□ -1.35
VAPB-201ENST00000265619 AGPAT4-IT1Q9H0P7 198 aa6.59□□□□□ -1.35
VAPB-201ENST00000265619 TP53TG1Q9Y2A0 90 aa6.59□□□□□ -1.35
VAPB-201ENST00000265619 ORMDL2Q53FV1 153 aa6.58□□□□□ -1.36
VAPB-201ENST00000265619 C6orf226Q5I0X4 101 aa6.58□□□□□ -1.36
VAPB-201ENST00000265619 Q5XG85 94 aa6.58□□□□□ -1.36
VAPB-201ENST00000265619 ITLN2Q8WWU7 325 aaPredicted RBP6.58□□□□□ -1.36
VAPB-201ENST00000265619 LINC01600Q96MT4 127 aa6.58□□□□□ -1.36
VAPB-201ENST00000265619 IGHV3-49A0A0A0MS15 119 aa6.58□□□□□ -1.36
VAPB-201ENST00000265619 VPS13CQ709C8 3753 aa6.58□□□□□ -1.36
VAPB-201ENST00000265619 A0A0B4J2C4 111 aa6.58□□□□□ -1.36
VAPB-201ENST00000265619 DEFB1P60022 68 aa6.58□□□□□ -1.36
VAPB-201ENST00000265619 MAPK1IP1LQ8NDC0 245 aa6.58□□□□□ -1.36
VAPB-201ENST00000265619 IGIPA6NJ69 53 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 OVOL1O14753 267 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 MGPP08493 103 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 NOTCH3Q9UM47 2321 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 NACAE9PAV3 2078 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 TRAV8-3A0A0A6YYJ7 113 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 A0A1B0GX51 115 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 DLX6P56179 175 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 ADAMTSL4-AS1Q5T5F5 129 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 ICOSQ9Y6W8 199 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 FLNBO75369 2602 aaKnown RBP6.57□□□□□ -1.36
VAPB-201ENST00000265619 TRBV30A0A0K0K1B3 111 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 NBR2O15453 112 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 HIST2H2BCQ6DN03 193 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 GAGE2AQ6NT46 116 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 C9orf47Q6ZRZ4 202 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 GPHB5Q86YW7 130 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 FAM19A4Q96LR4 140 aa6.57□□□□□ -1.36
VAPB-201ENST00000265619 RPL35AP18077 110 aaKnown RBP6.56□□□□□ -1.36
VAPB-201ENST00000265619 DEFB121Q5J5C9 76 aa6.56□□□□□ -1.36
VAPB-201ENST00000265619 KHDC1LQ5JSQ8 128 aa6.56□□□□□ -1.36
VAPB-201ENST00000265619 DPH3Q96FX2 82 aa6.56□□□□□ -1.36
VAPB-201ENST00000265619 LGALS3P17931 250 aaKnown RBP6.56□□□□□ -1.36
VAPB-201ENST00000265619 LOXP28300 417 aaPredicted RBP6.56□□□□□ -1.36
VAPB-201ENST00000265619 A8MZ25 164 aa6.56□□□□□ -1.36
VAPB-201ENST00000265619 JPT2Q9H910 190 aa6.56□□□□□ -1.36
VAPB-201ENST00000265619 FAM240AA0A1B0GVK7 77 aa6.55□□□□□ -1.36
VAPB-201ENST00000265619 COX7CP15954 63 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms