RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ZNRF2Q8NHG8 242 aa8.12□□□□□ -1.11
MSH3-201ENST00000265081 FAM110AQ9BQ89 295 aa8.12□□□□□ -1.11
MSH3-201ENST00000265081 RBX1P62877 108 aa8.11□□□□□ -1.11
MSH3-201ENST00000265081 SPANXB1Q9NS25 103 aaPredicted RBP8.11□□□□□ -1.11
MSH3-201ENST00000265081 RS1O15537 224 aa8.11□□□□□ -1.11
MSH3-201ENST00000265081 SMIM13P0DJ93 91 aa8.11□□□□□ -1.11
MSH3-201ENST00000265081 TCTAP57738 103 aa8.11□□□□□ -1.11
MSH3-201ENST00000265081 ODF3L2Q3SX64 289 aa8.11□□□□□ -1.11
MSH3-201ENST00000265081 KLHL30-AS1Q8NEE0 82 aa8.11□□□□□ -1.11
MSH3-201ENST00000265081 SPXQ9BT56 116 aa8.11□□□□□ -1.11
MSH3-201ENST00000265081 CD300EQ496F6 205 aaPredicted RBP8.1□□□□□ -1.11
MSH3-201ENST00000265081 CFAP126Q5VTH2 177 aa8.1□□□□□ -1.11
MSH3-201ENST00000265081 OR4C5Q8NGB2 326 aa8.1□□□□□ -1.11
MSH3-201ENST00000265081 PRADC1Q9BSG0 188 aa8.1□□□□□ -1.11
MSH3-201ENST00000265081 TEX15Q9BXT5 2789 aa8.1□□□□□ -1.11
MSH3-201ENST00000265081 IGKV3-20P01619 116 aa8.1□□□□□ -1.11
MSH3-201ENST00000265081 OR11H12B2RN74 326 aa8.1□□□□□ -1.11
MSH3-201ENST00000265081 ZNF415Q09FC8 603 aa8.1□□□□□ -1.11
MSH3-201ENST00000265081 OR11H2Q8NH07 326 aa8.1□□□□□ -1.11
MSH3-201ENST00000265081 RNASE8Q8TDE3 154 aaKnown RBP8.1□□□□□ -1.11
MSH3-201ENST00000265081 ZNF56Q15929 161 aa8.09□□□□□ -1.11
MSH3-201ENST00000265081 DNAJC30Q96LL9 226 aa8.09□□□□□ -1.11
MSH3-201ENST00000265081 ACACBO00763 2458 aa8.09□□□□□ -1.11
MSH3-201ENST00000265081 PLA2G2AP14555 144 aa8.09□□□□□ -1.11
MSH3-201ENST00000265081 IGLV4-3A0A075B6K6 122 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 TMEM223A0PJW6 202 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 AGRNO00468 2067 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 MYO18BQ8IUG5 2567 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 ADARB2-AS1A8MUL3 147 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 INSP01308 110 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 IGHV3-53P01767 116 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 UBE2D1P51668 147 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 GTF2H5Q6ZYL4 71 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 CHCHD7Q9BUK0 85 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 H3BUT2 72 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 NDUFA7O95182 113 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 TSPEAR-AS2P59090 65 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 Q6ZSN1 163 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 FAM19A3Q7Z5A8 133 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 CENPEQ02224 2701 aa8.08□□□□□ -1.12
MSH3-201ENST00000265081 RHODO00212 210 aa8.07□□□□□ -1.12
MSH3-201ENST00000265081 FAM74A4Q5TZK3 123 aa8.07□□□□□ -1.12
MSH3-201ENST00000265081 DUX3Q96PT4 197 aa8.07□□□□□ -1.12
MSH3-201ENST00000265081 DOPEY2Q9Y3R5 2298 aa8.07□□□□□ -1.12
MSH3-201ENST00000265081 GAGE12BA1L429 117 aa8.07□□□□□ -1.12
MSH3-201ENST00000265081 F5H697 171 aa8.07□□□□□ -1.12
MSH3-201ENST00000265081 GCSHP23434 173 aa8.07□□□□□ -1.12
MSH3-201ENST00000265081 MRPS36P82909 103 aaKnown RBP8.07□□□□□ -1.12
MSH3-201ENST00000265081 C12orf74Q32Q52 190 aa8.07□□□□□ -1.12
MSH3-201ENST00000265081 A0A0J9YY99 117 aa8.07□□□□□ -1.12
MSH3-201ENST00000265081 CD28P10747 220 aa8.07□□□□□ -1.12
MSH3-201ENST00000265081 C1orf158Q8N1D5 194 aa8.07□□□□□ -1.12
MSH3-201ENST00000265081 TSSC4Q9Y5U2 329 aaPredicted RBP8.07□□□□□ -1.12
MSH3-201ENST00000265081 IGLL5B9A064 214 aa8.06□□□□□ -1.12
MSH3-201ENST00000265081 SAMD5Q5TGI4 173 aa8.06□□□□□ -1.12
MSH3-201ENST00000265081 PLEKHB2Q96CS7 222 aa8.06□□□□□ -1.12
MSH3-201ENST00000265081 C19orf73Q9NVV2 129 aa8.06□□□□□ -1.12
MSH3-201ENST00000265081 GAGE10A6NGK3 116 aa8.06□□□□□ -1.12
MSH3-201ENST00000265081 CCL24O00175 119 aa8.06□□□□□ -1.12
MSH3-201ENST00000265081 LEPROTO15243 131 aa8.06□□□□□ -1.12
MSH3-201ENST00000265081 GIG44P09565 113 aaPredicted RBP8.06□□□□□ -1.12
MSH3-201ENST00000265081 LINC01006Q8NI28 216 aa8.06□□□□□ -1.12
MSH3-201ENST00000265081 DYNLRB2Q8TF09 96 aa8.06□□□□□ -1.12
MSH3-201ENST00000265081 USP9YO00507 2555 aaPredicted RBP8.05□□□□□ -1.12
MSH3-201ENST00000265081 ITPR3Q14573 2671 aa8.05□□□□□ -1.12
MSH3-201ENST00000265081 MAP1AP78559 2803 aaPredicted RBP8.05□□□□□ -1.12
MSH3-201ENST00000265081 ZNF22P17026 224 aaPredicted RBP8.05□□□□□ -1.12
MSH3-201ENST00000265081 SLC25A29Q8N8R3 303 aa8.05□□□□□ -1.12
MSH3-201ENST00000265081 K7ERJ3 54 aa8.05□□□□□ -1.12
MSH3-201ENST00000265081 PROK1P58294 105 aa8.05□□□□□ -1.12
MSH3-201ENST00000265081 HERVK_113P61574 105 aa8.05□□□□□ -1.12
MSH3-201ENST00000265081 UBE2D4Q9Y2X8 147 aa8.05□□□□□ -1.12
MSH3-201ENST00000265081 CMC4P56277 68 aaPredicted RBP8.04□□□□□ -1.12
MSH3-201ENST00000265081 OCIAD2Q56VL3 154 aa8.04□□□□□ -1.12
MSH3-201ENST00000265081 TIMM21Q9BVV7 248 aa8.04□□□□□ -1.12
MSH3-201ENST00000265081 SPANXA1Q9NS26 97 aa8.04□□□□□ -1.12
MSH3-201ENST00000265081 ZNF815PA8K554 130 aa8.04□□□□□ -1.12
MSH3-201ENST00000265081 IGHV3-30P01768 117 aa8.04□□□□□ -1.12
MSH3-201ENST00000265081 IGHV3-30-5P0DP03 117 aa8.04□□□□□ -1.12
MSH3-201ENST00000265081 IGLV1-51P01701 117 aa8.03□□□□□ -1.12
MSH3-201ENST00000265081 HILS1P60008 231 aa8.03□□□□□ -1.12
MSH3-201ENST00000265081 IGLV5-45A0A087WSX0 123 aa8.03□□□□□ -1.12
MSH3-201ENST00000265081 PLAC8L1A1L4L8 177 aa8.03□□□□□ -1.12
MSH3-201ENST00000265081 FABP2P12104 132 aa8.03□□□□□ -1.12
MSH3-201ENST00000265081 RRN3P1Q2M238 152 aa8.03□□□□□ -1.12
MSH3-201ENST00000265081 HIST1H4GQ99525 98 aa8.03□□□□□ -1.12
MSH3-201ENST00000265081 NHP2Q9NX24 153 aaKnown RBP8.03□□□□□ -1.12
MSH3-201ENST00000265081 CSNK1G2-AS1Q8NCQ2 148 aa8.03□□□□□ -1.12
MSH3-201ENST00000265081 CITED2Q99967 270 aaPredicted RBP8.03□□□□□ -1.12
MSH3-201ENST00000265081 Q9UF83 564 aa8.03□□□□□ -1.12
MSH3-201ENST00000265081 SPCS1Q9Y6A9 102 aa8.03□□□□□ -1.12
MSH3-201ENST00000265081 TINCRA0A1B0GVN0 87 aa8.02□□□□□ -1.13
MSH3-201ENST00000265081 PRM2P04554 102 aa8.02□□□□□ -1.13
MSH3-201ENST00000265081 OPRPNQ99935 248 aaPredicted RBP8.02□□□□□ -1.13
MSH3-201ENST00000265081 AZU1P20160 251 aa8.02□□□□□ -1.13
MSH3-201ENST00000265081 DAZ2Q13117 558 aaKnown RBP8.02□□□□□ -1.13
MSH3-201ENST00000265081 SBSPONQ8IVN8 264 aa8.02□□□□□ -1.13
MSH3-201ENST00000265081 RAB37Q96AX2 223 aa8.02□□□□□ -1.13
MSH3-201ENST00000265081 J3QQQ9 107 aa8.01□□□□□ -1.13
MSH3-201ENST00000265081 SCGB2A2Q13296 93 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms