RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 RASL10AQ92737 203 aa15□□□□□ -0.01
CSPG5-201ENST00000264723 RPL36ALQ969Q0 106 aaKnown RBP15□□□□□ -0.01
CSPG5-201ENST00000264723 C20orf78Q9BR46 151 aa14.99□□□□□ -0.01
CSPG5-201ENST00000264723 GAGE12JA6NER3 117 aa14.99□□□□□ -0.01
CSPG5-201ENST00000264723 IGHG4P01861 327 aa14.99□□□□□ -0.01
CSPG5-201ENST00000264723 GAGE4Q13068 117 aa14.99□□□□□ -0.01
CSPG5-201ENST00000264723 GAGE5Q13069 117 aa14.99□□□□□ -0.01
CSPG5-201ENST00000264723 BAALCQ8WXS3 180 aa14.99□□□□□ -0.01
CSPG5-201ENST00000264723 ATP6V0BQ99437 205 aa14.99□□□□□ -0.01
CSPG5-201ENST00000264723 LENEPQ9Y5L5 61 aa14.99□□□□□ -0.01
CSPG5-201ENST00000264723 ERG28Q9UKR5 140 aa14.98□□□□□ -0.01
CSPG5-201ENST00000264723 CCL24O00175 119 aa14.98□□□□□ -0.01
CSPG5-201ENST00000264723 TRPT1Q86TN4 253 aaKnown RBP14.98□□□□□ -0.01
CSPG5-201ENST00000264723 GAGE7O76087 117 aa14.98□□□□□ -0.01
CSPG5-201ENST00000264723 GAGE12FP0CL80 117 aa14.98□□□□□ -0.01
CSPG5-201ENST00000264723 GAGE12GP0CL81 117 aa14.98□□□□□ -0.01
CSPG5-201ENST00000264723 GAGE12IP0CL82 117 aa14.98□□□□□ -0.01
CSPG5-201ENST00000264723 C11orf86A6NJI1 115 aa14.97□□□□□ -0.01
CSPG5-201ENST00000264723 A8MWV9 139 aa14.97□□□□□ -0.01
CSPG5-201ENST00000264723 TMEM61Q8N0U2 210 aa14.97□□□□□ -0.01
CSPG5-201ENST00000264723 Q8N1Y9 231 aa14.97□□□□□ -0.01
CSPG5-201ENST00000264723 OR13C6PQ8NH95 151 aa14.97□□□□□ -0.01
CSPG5-201ENST00000264723 C9JAW5 83 aa14.97□□□□□ -0.01
CSPG5-201ENST00000264723 ZNRF2Q8NHG8 242 aa14.97□□□□□ -0.01
CSPG5-201ENST00000264723 KRTAP10-9P60411 292 aa14.96□□□□□ -0.01
CSPG5-201ENST00000264723 ZNF843Q8N446 348 aa14.96□□□□□ -0.01
CSPG5-201ENST00000264723 ZFAND2AQ8N6M9 145 aa14.96□□□□□ -0.01
CSPG5-201ENST00000264723 AZU1P20160 251 aa14.96□□□□□ -0.01
CSPG5-201ENST00000264723 ZFP2Q6ZN57 461 aa14.96□□□□□ -0.01
CSPG5-201ENST00000264723 C11orf68Q9H3H3 251 aaKnown RBP14.95□□□□□ -0.02
CSPG5-201ENST00000264723 J3QQQ9 107 aa14.95□□□□□ -0.02
CSPG5-201ENST00000264723 PTH2Q96A98 100 aa14.95□□□□□ -0.02
CSPG5-201ENST00000264723 A0A0J9YXV3 536 aa14.95□□□□□ -0.02
CSPG5-201ENST00000264723 GPHB5Q86YW7 130 aa14.95□□□□□ -0.02
CSPG5-201ENST00000264723 COL12A1Q99715 3063 aa14.94□□□□□ -0.02
CSPG5-201ENST00000264723 FOXI2Q6ZQN5 318 aa14.94□□□□□ -0.02
CSPG5-201ENST00000264723 PRM2P04554 102 aa14.94□□□□□ -0.02
CSPG5-201ENST00000264723 NRACQ8N912 160 aa14.94□□□□□ -0.02
CSPG5-201ENST00000264723 PLEKHB2Q96CS7 222 aa14.93□□□□□ -0.02
CSPG5-201ENST00000264723 GAGE12HA6NDE8 117 aa14.93□□□□□ -0.02
CSPG5-201ENST00000264723 CEMP1Q6PRD7 247 aaPredicted RBP14.92□□□□□ -0.02
CSPG5-201ENST00000264723 HHLA3Q9XRX5 114 aa14.92□□□□□ -0.02
CSPG5-201ENST00000264723 TIMM21Q9BVV7 248 aa14.92□□□□□ -0.02
CSPG5-201ENST00000264723 F8W1H4 67 aa14.92□□□□□ -0.02
CSPG5-201ENST00000264723 P0DMU3 169 aa14.92□□□□□ -0.02
CSPG5-201ENST00000264723 FAM231AP0DMU4 169 aa14.92□□□□□ -0.02
CSPG5-201ENST00000264723 FAM231CP0DMU5 169 aa14.92□□□□□ -0.02
CSPG5-201ENST00000264723 IGHV4-31P0DP07 118 aa14.91□□□□□ -0.02
CSPG5-201ENST00000264723 TOMM6Q96B49 74 aa14.91□□□□□ -0.02
CSPG5-201ENST00000264723 I3L3M4 83 aa14.91□□□□□ -0.02
CSPG5-201ENST00000264723 RNASE1P07998 156 aaKnown RBP14.91□□□□□ -0.02
CSPG5-201ENST00000264723 U3KQE9 123 aa14.91□□□□□ -0.02
CSPG5-201ENST00000264723 HIGD1BQ9P298 99 aa14.9□□□□□ -0.02
CSPG5-201ENST00000264723 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.9□□□□□ -0.02
CSPG5-201ENST00000264723 IGKV2-29A2NJV5 120 aaPredicted RBP14.9□□□□□ -0.02
CSPG5-201ENST00000264723 K7EMT4 169 aa14.9□□□□□ -0.02
CSPG5-201ENST00000264723 A0A1B0GV72 72 aa14.89□□□□□ -0.03
CSPG5-201ENST00000264723 A0A096LPF7 62 aa14.89□□□□□ -0.03
CSPG5-201ENST00000264723 CITED2Q99967 270 aaPredicted RBP14.89□□□□□ -0.03
CSPG5-201ENST00000264723 CFAP46Q8IYW2 2715 aa14.88□□□□□ -0.03
CSPG5-201ENST00000264723 G3V4G9 280 aa14.88□□□□□ -0.03
CSPG5-201ENST00000264723 NOP10Q9NPE3 64 aaKnown RBP14.88□□□□□ -0.03
CSPG5-201ENST00000264723 TMEM238C9JI98 176 aa14.88□□□□□ -0.03
CSPG5-201ENST00000264723 C1QTNF4Q9BXJ3 329 aa14.87□□□□□ -0.03
CSPG5-201ENST00000264723 SPINK8P0C7L1 97 aa14.87□□□□□ -0.03
CSPG5-201ENST00000264723 SRSF2Q01130 221 aaKnown RBP14.87□□□□□ -0.03
CSPG5-201ENST00000264723 TAL2Q16559 108 aa14.87□□□□□ -0.03
CSPG5-201ENST00000264723 A0A0J9YX75 114 aa14.87□□□□□ -0.03
CSPG5-201ENST00000264723 PRO1854Q9UHT4 67 aa14.87□□□□□ -0.03
CSPG5-201ENST00000264723 TMEM141Q96I45 108 aa14.87□□□□□ -0.03
CSPG5-201ENST00000264723 RHODO00212 210 aa14.86□□□□□ -0.03
CSPG5-201ENST00000264723 E9PLD3 99 aa14.86□□□□□ -0.03
CSPG5-201ENST00000264723 C18orf65Q6ZTR6 163 aa14.86□□□□□ -0.03
CSPG5-201ENST00000264723 A4D1N5 150 aa14.85□□□□□ -0.03
CSPG5-201ENST00000264723 SNCGO76070 127 aa14.85□□□□□ -0.03
CSPG5-201ENST00000264723 RNASE3P12724 160 aaKnown RBP14.85□□□□□ -0.03
CSPG5-201ENST00000264723 DAND5Q8N907 189 aa14.85□□□□□ -0.03
CSPG5-201ENST00000264723 M0R2P5 195 aa14.84□□□□□ -0.03
CSPG5-201ENST00000264723 NEXN-AS1Q8NBZ9 246 aa14.84□□□□□ -0.03
CSPG5-201ENST00000264723 BBC3Q96PG8 261 aaPredicted RBP14.84□□□□□ -0.03
CSPG5-201ENST00000264723 RELNP78509 3460 aa14.84□□□□□ -0.03
CSPG5-201ENST00000264723 DNAJC9-AS1A6NH13 148 aa14.83□□□□□ -0.03
CSPG5-201ENST00000264723 CMC4P56277 68 aaPredicted RBP14.83□□□□□ -0.03
CSPG5-201ENST00000264723 NDUFA12Q9UI09 145 aa14.83□□□□□ -0.03
CSPG5-201ENST00000264723 TRAV8-3A0A0A6YYJ7 113 aa14.83□□□□□ -0.04
CSPG5-201ENST00000264723 TRAV12-1A0A0B4J245 112 aa14.83□□□□□ -0.04
CSPG5-201ENST00000264723 PROK1P58294 105 aa14.83□□□□□ -0.04
CSPG5-201ENST00000264723 CKS1BP61024 79 aa14.83□□□□□ -0.04
CSPG5-201ENST00000264723 TTC32Q5I0X7 151 aa14.83□□□□□ -0.04
CSPG5-201ENST00000264723 SPAG8Q99932 426 aaPredicted RBP14.83□□□□□ -0.04
CSPG5-201ENST00000264723 CNFNQ9BYD5 112 aa14.82□□□□□ -0.04
CSPG5-201ENST00000264723 Q6YL49 198 aa14.82□□□□□ -0.04
CSPG5-201ENST00000264723 LINC00158P58513 81 aa14.82□□□□□ -0.04
CSPG5-201ENST00000264723 PRIMA1Q86XR5 153 aa14.82□□□□□ -0.04
CSPG5-201ENST00000264723 GAGE6Q13070 117 aa14.81□□□□□ -0.04
CSPG5-201ENST00000264723 TM2D2Q9BX73 214 aa14.81□□□□□ -0.04
CSPG5-201ENST00000264723 ASH1LQ9NR48 2969 aaKnown RBP14.81□□□□□ -0.04
CSPG5-201ENST00000264723 MUSTN1Q8IVN3 82 aa14.81□□□□□ -0.04
CSPG5-201ENST00000264723 INSL3P51460 131 aa14.81□□□□□ -0.04
CSPG5-201ENST00000264723 TRBV7-9A0A0J9YWB2 115 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms