RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 SMAD5-AS1Q9Y6J3 95 aa11.55□□□□□ -0.56
NID1-201ENST00000264187 TNRC6BQ9UPQ9 1833 aaKnown RBP11.55□□□□□ -0.56
NID1-201ENST00000264187 LINC00269Q8N2A0 174 aa11.54□□□□□ -0.56
NID1-201ENST00000264187 HIGD1BQ9P298 99 aa11.54□□□□□ -0.56
NID1-201ENST00000264187 UNQ9165/PRO28630Q6UXU0 137 aa11.54□□□□□ -0.56
NID1-201ENST00000264187 MRPL55Q7Z7F7 128 aaKnown RBP11.54□□□□□ -0.56
NID1-201ENST00000264187 FAM167A-AS1Q96KT0 104 aa11.54□□□□□ -0.56
NID1-201ENST00000264187 FAM19A1Q7Z5A9 133 aa11.54□□□□□ -0.56
NID1-201ENST00000264187 TMEM263Q8WUH6 116 aaKnown RBP11.54□□□□□ -0.56
NID1-201ENST00000264187 PLA2G2EQ9NZK7 142 aa11.54□□□□□ -0.56
NID1-201ENST00000264187 XIRP1Q702N8 1843 aaKnown RBP11.54□□□□□ -0.56
NID1-201ENST00000264187 G3V4G9 280 aa11.53□□□□□ -0.56
NID1-201ENST00000264187 NDUFA11Q86Y39 141 aa11.53□□□□□ -0.56
NID1-201ENST00000264187 A0A087WZ39 114 aa11.53□□□□□ -0.56
NID1-201ENST00000264187 E7EUB6 86 aa11.53□□□□□ -0.56
NID1-201ENST00000264187 LOXL1Q08397 574 aaPredicted RBP11.52□□□□□ -0.56
NID1-201ENST00000264187 COA6Q5JTJ3 125 aaKnown RBP11.52□□□□□ -0.56
NID1-201ENST00000264187 TP53TG3Q9ULZ0 132 aa11.52□□□□□ -0.56
NID1-201ENST00000264187 SBF2Q86WG5 1849 aa11.52□□□□□ -0.56
NID1-201ENST00000264187 ANK1P16157 1881 aa11.52□□□□□ -0.57
NID1-201ENST00000264187 TEX49A0A1B0GTD5 131 aa11.52□□□□□ -0.57
NID1-201ENST00000264187 NDUFV3P56181 108 aaKnown RBP11.52□□□□□ -0.57
NID1-201ENST00000264187 ENHOQ6UWT2 76 aa11.52□□□□□ -0.57
NID1-201ENST00000264187 C20orf203Q8NBC4 194 aa11.52□□□□□ -0.57
NID1-201ENST00000264187 IGKV1D-37A0A075B6S9 117 aa11.51□□□□□ -0.57
NID1-201ENST00000264187 PRO0255Q9UI72 69 aa11.51□□□□□ -0.57
NID1-201ENST00000264187 K7ERS5 55 aa11.5□□□□□ -0.57
NID1-201ENST00000264187 LINC00643Q86TS7 51 aa11.5□□□□□ -0.57
NID1-201ENST00000264187 C10orf105Q8TEF2 133 aa11.5□□□□□ -0.57
NID1-201ENST00000264187 MT-ATP8P03928 68 aa11.5□□□□□ -0.57
NID1-201ENST00000264187 MIAQ16674 131 aa11.5□□□□□ -0.57
NID1-201ENST00000264187 TRBV6-1A0A0K0K1D8 114 aa11.49□□□□□ -0.57
NID1-201ENST00000264187 PLA2G2CQ5R387 149 aa11.49□□□□□ -0.57
NID1-201ENST00000264187 IGLC6P0CF74 106 aa11.49□□□□□ -0.57
NID1-201ENST00000264187 REG3AQ06141 175 aa11.49□□□□□ -0.57
NID1-201ENST00000264187 Q6ZTI0 123 aa11.49□□□□□ -0.57
NID1-201ENST00000264187 DCANP1Q8TF63 244 aa11.49□□□□□ -0.57
NID1-201ENST00000264187 C11orf45Q8TAV5 145 aa11.48□□□□□ -0.57
NID1-201ENST00000264187 CTRLP40313 264 aa11.48□□□□□ -0.57
NID1-201ENST00000264187 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.48□□□□□ -0.57
NID1-201ENST00000264187 A0A0J9YXY3 114 aa11.48□□□□□ -0.57
NID1-201ENST00000264187 PRR4Q16378 134 aa11.48□□□□□ -0.57
NID1-201ENST00000264187 SPATA12Q7Z6I5 190 aa11.48□□□□□ -0.57
NID1-201ENST00000264187 FAM236DA0A1B0GTK5 79 aa11.48□□□□□ -0.57
NID1-201ENST00000264187 FAM236CP0DP71 79 aa11.48□□□□□ -0.57
NID1-201ENST00000264187 FAM19A5Q7Z5A7 132 aaPredicted RBP11.48□□□□□ -0.57
NID1-201ENST00000264187 C4orf3Q8WVX3 66 aa11.48□□□□□ -0.57
NID1-201ENST00000264187 PLA2G5P39877 138 aa11.47□□□□□ -0.57
NID1-201ENST00000264187 MYCNOSP40205 109 aa11.47□□□□□ -0.57
NID1-201ENST00000264187 SPINK6Q6UWN8 80 aa11.47□□□□□ -0.57
NID1-201ENST00000264187 Q8N7P7 452 aa11.47□□□□□ -0.57
NID1-201ENST00000264187 FAM208BQ5VWN6 2430 aa11.47□□□□□ -0.57
NID1-201ENST00000264187 PDE6GP18545 87 aa11.47□□□□□ -0.57
NID1-201ENST00000264187 HIST2H2BDQ6DRA6 164 aa11.47□□□□□ -0.57
NID1-201ENST00000264187 ZFAND2AQ8N6M9 145 aa11.47□□□□□ -0.57
NID1-201ENST00000264187 XAGE1AQ9HD64 81 aa11.47□□□□□ -0.57
NID1-201ENST00000264187 TP73-AS1Q9UF72 201 aa11.47□□□□□ -0.57
NID1-201ENST00000264187 HELZP42694 1942 aaKnown RBP11.46□□□□□ -0.57
NID1-201ENST00000264187 PTPRQQ9UMZ3 2332 aa11.46□□□□□ -0.57
NID1-201ENST00000264187 C1orf158Q8N1D5 194 aa11.46□□□□□ -0.57
NID1-201ENST00000264187 MAP6D1Q9H9H5 199 aa11.46□□□□□ -0.57
NID1-201ENST00000264187 A0A0J9YX75 114 aa11.46□□□□□ -0.57
NID1-201ENST00000264187 HRCT1Q6UXD1 115 aa11.46□□□□□ -0.57
NID1-201ENST00000264187 K7EMT4 169 aa11.46□□□□□ -0.58
NID1-201ENST00000264187 C3orf84H3BNL1 204 aa11.46□□□□□ -0.58
NID1-201ENST00000264187 Q8NFD4 153 aa11.46□□□□□ -0.58
NID1-201ENST00000264187 SIPA1L1O43166 1804 aa11.45□□□□□ -0.58
NID1-201ENST00000264187 UFSP1Q6NVU6 142 aa11.45□□□□□ -0.58
NID1-201ENST00000264187 ZNF80P51504 273 aaPredicted RBP11.45□□□□□ -0.58
NID1-201ENST00000264187 PIK3CD-AS1Q5SR53 167 aa11.45□□□□□ -0.58
NID1-201ENST00000264187 CHCHD10Q8WYQ3 142 aaPredicted RBP11.45□□□□□ -0.58
NID1-201ENST00000264187 PPDPFQ9H3Y8 114 aa11.45□□□□□ -0.58
NID1-201ENST00000264187 IGHV4-30-4P0DP06 118 aa11.45□□□□□ -0.58
NID1-201ENST00000264187 IGHV4-31P0DP07 118 aa11.45□□□□□ -0.58
NID1-201ENST00000264187 FAM240AA0A1B0GVK7 77 aa11.44□□□□□ -0.58
NID1-201ENST00000264187 CRYGDP07320 174 aa11.44□□□□□ -0.58
NID1-201ENST00000264187 ADORA2A-AS1P86434 159 aa11.44□□□□□ -0.58
NID1-201ENST00000264187 TRBV10-1A0A0K0K1A3 114 aa11.43□□□□□ -0.58
NID1-201ENST00000264187 LINC00467Q9BRT7 94 aa11.43□□□□□ -0.58
NID1-201ENST00000264187 MED14OSP0DP75 135 aa11.43□□□□□ -0.58
NID1-201ENST00000264187 WDR90Q96KV7 1748 aa11.43□□□□□ -0.58
NID1-201ENST00000264187 FAM222AQ5U5X8 452 aa11.43□□□□□ -0.58
NID1-201ENST00000264187 SNURFQ9Y675 71 aa11.43□□□□□ -0.58
NID1-201ENST00000264187 GREB1LQ9C091 1923 aaPredicted RBP11.43□□□□□ -0.58
NID1-201ENST00000264187 ARHGAP21Q5T5U3 1957 aa11.43□□□□□ -0.58
NID1-201ENST00000264187 CDKN2A-AS1Q9UH64 79 aa11.42□□□□□ -0.58
NID1-201ENST00000264187 RLFQ13129 1914 aa11.42□□□□□ -0.58
NID1-201ENST00000264187 TICRRQ7Z2Z1 1910 aa11.42□□□□□ -0.58
NID1-201ENST00000264187 WFDC13Q8IUB5 93 aa11.42□□□□□ -0.58
NID1-201ENST00000264187 LINC01548A6NM66 108 aa11.41□□□□□ -0.58
NID1-201ENST00000264187 ODF3L1Q8IXM7 274 aa11.41□□□□□ -0.58
NID1-201ENST00000264187 NCKAP5O14513 1909 aa11.41□□□□□ -0.58
NID1-201ENST00000264187 NDUFC2-KCTD14E9PQ53 114 aa11.4□□□□□ -0.58
NID1-201ENST00000264187 PIP4P1Q86T03 277 aa11.4□□□□□ -0.58
NID1-201ENST00000264187 IGKV2-28A0A075B6P5 120 aa11.4□□□□□ -0.58
NID1-201ENST00000264187 IGKV2D-28P01615 120 aa11.4□□□□□ -0.58
NID1-201ENST00000264187 WDR81Q562E7 1941 aa11.4□□□□□ -0.58
NID1-201ENST00000264187 LINC00322Q6ZN03 302 aaPredicted RBP11.4□□□□□ -0.58
NID1-201ENST00000264187 TNRC6AQ8NDV7 1962 aaKnown RBP11.4□□□□□ -0.58
NID1-201ENST00000264187 DNAJC9-AS1A6NH13 148 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms