RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 P01737 135 aa10.65□□□□□ -0.7
USE1-201ENST00000263897 WFDC2Q14508 124 aa10.65□□□□□ -0.7
USE1-201ENST00000263897 ELOBQ15370 118 aa10.65□□□□□ -0.7
USE1-201ENST00000263897 RMI2Q96E14 147 aa10.65□□□□□ -0.7
USE1-201ENST00000263897 AP1S3Q96PC3 154 aa10.65□□□□□ -0.7
USE1-201ENST00000263897 TPPP3Q9BW30 176 aa10.65□□□□□ -0.7
USE1-201ENST00000263897 hCG_2014768A0A024R1R8 64 aa10.64□□□□□ -0.71
USE1-201ENST00000263897 XKRY2A2RUG3 117 aa10.64□□□□□ -0.71
USE1-201ENST00000263897 F2Z2F3 143 aa10.64□□□□□ -0.71
USE1-201ENST00000263897 CACNG7P62955 275 aa10.64□□□□□ -0.71
USE1-201ENST00000263897 KCNIP4Q6PIL6 250 aa10.64□□□□□ -0.71
USE1-201ENST00000263897 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.64□□□□□ -0.71
USE1-201ENST00000263897 DNAJC30Q96LL9 226 aa10.64□□□□□ -0.71
USE1-201ENST00000263897 EPM2AB3EWF7 344 aa10.63□□□□□ -0.71
USE1-201ENST00000263897 TMEM262E9PQX1 116 aa10.63□□□□□ -0.71
USE1-201ENST00000263897 NUDT10Q8NFP7 164 aa10.63□□□□□ -0.71
USE1-201ENST00000263897 BAALCQ8WXS3 180 aa10.63□□□□□ -0.71
USE1-201ENST00000263897 UBE2WQ96B02 151 aa10.63□□□□□ -0.71
USE1-201ENST00000263897 NUDT11Q96G61 164 aa10.63□□□□□ -0.71
USE1-201ENST00000263897 LECT2O14960 151 aa10.62□□□□□ -0.71
USE1-201ENST00000263897 BLOC1S1P78537 153 aa10.62□□□□□ -0.71
USE1-201ENST00000263897 TMEM97Q5BJF2 176 aa10.62□□□□□ -0.71
USE1-201ENST00000263897 LYZL1Q6UWQ5 148 aa10.62□□□□□ -0.71
USE1-201ENST00000263897 ALKAL2Q6UX46 152 aa10.62□□□□□ -0.71
USE1-201ENST00000263897 NTM-AS1Q6ZSK4 140 aa10.62□□□□□ -0.71
USE1-201ENST00000263897 TMEM70Q9BUB7 260 aa10.62□□□□□ -0.71
USE1-201ENST00000263897 IGKV2D-24A0A075B6R9 120 aa10.61□□□□□ -0.71
USE1-201ENST00000263897 M0QY20 66 aa10.61□□□□□ -0.71
USE1-201ENST00000263897 Q0VG73 95 aa10.61□□□□□ -0.71
USE1-201ENST00000263897 WDR73Q6P4I2 378 aa10.61□□□□□ -0.71
USE1-201ENST00000263897 ATRAIDQ6UW56 229 aa10.61□□□□□ -0.71
USE1-201ENST00000263897 OCC1Q8TAD7 63 aa10.61□□□□□ -0.71
USE1-201ENST00000263897 H7C1H1 209 aa10.6□□□□□ -0.71
USE1-201ENST00000263897 MGPP08493 103 aa10.6□□□□□ -0.71
USE1-201ENST00000263897 NTF3P20783 257 aa10.6□□□□□ -0.71
USE1-201ENST00000263897 LYPD6BQ8NI32 183 aa10.6□□□□□ -0.71
USE1-201ENST00000263897 CHCHD5Q9BSY4 110 aa10.6□□□□□ -0.71
USE1-201ENST00000263897 K7EN84 100 aa10.59□□□□□ -0.71
USE1-201ENST00000263897 TRGC1P0CF51 173 aa10.59□□□□□ -0.71
USE1-201ENST00000263897 PKIAP61925 76 aa10.59□□□□□ -0.71
USE1-201ENST00000263897 MPV17L2Q567V2 206 aa10.59□□□□□ -0.71
USE1-201ENST00000263897 ENHOQ6UWT2 76 aa10.59□□□□□ -0.71
USE1-201ENST00000263897 Q8N976 141 aa10.59□□□□□ -0.71
USE1-201ENST00000263897 TMEM250H0YL14 139 aa10.58□□□□□ -0.72
USE1-201ENST00000263897 SMR3BP02814 79 aaPredicted RBP10.58□□□□□ -0.72
USE1-201ENST00000263897 SUMO4Q6EEV6 95 aa10.58□□□□□ -0.72
USE1-201ENST00000263897 C15orf54Q8N8G6 183 aa10.58□□□□□ -0.72
USE1-201ENST00000263897 RNASE7Q9H1E1 156 aaKnown RBP10.58□□□□□ -0.72
USE1-201ENST00000263897 FAM30AQ9NZY2 134 aa10.58□□□□□ -0.72
USE1-201ENST00000263897 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.57□□□□□ -0.72
USE1-201ENST00000263897 ANGP03950 147 aaKnown RBP10.57□□□□□ -0.72
USE1-201ENST00000263897 CTRLP40313 264 aa10.57□□□□□ -0.72
USE1-201ENST00000263897 RASL11AQ6T310 242 aa10.57□□□□□ -0.72
USE1-201ENST00000263897 FRZBQ92765 325 aa10.57□□□□□ -0.72
USE1-201ENST00000263897 CNFNQ9BYD5 112 aa10.57□□□□□ -0.72
USE1-201ENST00000263897 DPH3P1Q9H4G8 78 aa10.57□□□□□ -0.72
USE1-201ENST00000263897 RPP21Q9H633 154 aaKnown RBP10.57□□□□□ -0.72
USE1-201ENST00000263897 TRBV25-1A0A075B6N4 114 aa10.56□□□□□ -0.72
USE1-201ENST00000263897 HAMPP81172 84 aa10.56□□□□□ -0.72
USE1-201ENST00000263897 IQCJQ1A5X6 159 aa10.56□□□□□ -0.72
USE1-201ENST00000263897 Q5VSD8 79 aa10.56□□□□□ -0.72
USE1-201ENST00000263897 C1orf43Q9BWL3 253 aa10.56□□□□□ -0.72
USE1-201ENST00000263897 NIT2Q9NQR4 276 aa10.56□□□□□ -0.72
USE1-201ENST00000263897 CRPP02741 224 aa10.55□□□□□ -0.72
USE1-201ENST00000263897 NKX2-5P52952 324 aaPredicted RBP10.55□□□□□ -0.72
USE1-201ENST00000263897 RBX1P62877 108 aa10.55□□□□□ -0.72
USE1-201ENST00000263897 GAGE6Q13070 117 aa10.55□□□□□ -0.72
USE1-201ENST00000263897 TWIST1Q15672 202 aa10.55□□□□□ -0.72
USE1-201ENST00000263897 IGHV1-24A0A0C4DH33 117 aa10.54□□□□□ -0.72
USE1-201ENST00000263897 MIAQ16674 131 aa10.54□□□□□ -0.72
USE1-201ENST00000263897 PRR34Q9NV39 138 aa10.54□□□□□ -0.72
USE1-201ENST00000263897 FAM229AH3BQW9 127 aa10.53□□□□□ -0.72
USE1-201ENST00000263897 INAFM2P0DMQ5 153 aa10.53□□□□□ -0.72
USE1-201ENST00000263897 Q6ZSA8 131 aa10.53□□□□□ -0.72
USE1-201ENST00000263897 FAM231DQ6ZW35 169 aa10.53□□□□□ -0.72
USE1-201ENST00000263897 GTSF1Q8WW33 167 aa10.53□□□□□ -0.72
USE1-201ENST00000263897 A0A1B0GVG6 124 aa10.52□□□□□ -0.73
USE1-201ENST00000263897 GATCO43716 136 aaKnown RBP10.52□□□□□ -0.73
USE1-201ENST00000263897 LINC01620Q4KN68 170 aa10.52□□□□□ -0.73
USE1-201ENST00000263897 LINC00269Q8N2A0 174 aa10.52□□□□□ -0.73
USE1-201ENST00000263897 EIF5A2Q9GZV4 153 aaKnown RBP10.52□□□□□ -0.73
USE1-201ENST00000263897 SRRM2Q9UQ35 2752 aaKnown RBP10.52□□□□□ -0.73
USE1-201ENST00000263897 A8MWL6 223 aa10.51□□□□□ -0.73
USE1-201ENST00000263897 NDUFS6O75380 124 aaKnown RBP10.51□□□□□ -0.73
USE1-201ENST00000263897 CEBPGP53567 150 aa10.51□□□□□ -0.73
USE1-201ENST00000263897 C14orf177Q52M58 125 aa10.51□□□□□ -0.73
USE1-201ENST00000263897 PGLYRP4Q96LB8 373 aa10.51□□□□□ -0.73
USE1-201ENST00000263897 A0A1B0GUV1 79 aa10.5□□□□□ -0.73
USE1-201ENST00000263897 GATD1Q8NB37 220 aa10.5□□□□□ -0.73
USE1-201ENST00000263897 FAM210AQ96ND0 272 aa10.5□□□□□ -0.73
USE1-201ENST00000263897 TMEM243Q9BU79 118 aa10.5□□□□□ -0.73
USE1-201ENST00000263897 FOXA3P55318 350 aaPredicted RBP10.49□□□□□ -0.73
USE1-201ENST00000263897 KRTAP26-1Q6PEX3 210 aa10.49□□□□□ -0.73
USE1-201ENST00000263897 SMIM15Q7Z3B0 74 aa10.49□□□□□ -0.73
USE1-201ENST00000263897 DEFB104AQ8WTQ1 72 aa10.49□□□□□ -0.73
USE1-201ENST00000263897 SMIM7Q9BQ49 75 aa10.49□□□□□ -0.73
USE1-201ENST00000263897 TRAV26-2A0A0B4J265 109 aa10.48□□□□□ -0.73
USE1-201ENST00000263897 USP17L23D6RBM5 183 aa10.48□□□□□ -0.73
USE1-201ENST00000263897 REG3AQ06141 175 aa10.48□□□□□ -0.73
USE1-201ENST00000263897 COTL1Q14019 142 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms