RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 TOMM6Q96B49 74 aa11.4□□□□□ -0.59
VPS26A-201ENST00000263559 MIEN1Q9BRT3 115 aa11.4□□□□□ -0.59
VPS26A-201ENST00000263559 TRRAPQ9Y4A5 3859 aa11.39□□□□□ -0.59
VPS26A-201ENST00000263559 RS1O15537 224 aa11.39□□□□□ -0.59
VPS26A-201ENST00000263559 ATP5LO75964 103 aa11.39□□□□□ -0.59
VPS26A-201ENST00000263559 PRSS1P07477 247 aa11.39□□□□□ -0.59
VPS26A-201ENST00000263559 P0DMU3 169 aa11.39□□□□□ -0.59
VPS26A-201ENST00000263559 FAM231AP0DMU4 169 aa11.39□□□□□ -0.59
VPS26A-201ENST00000263559 FAM231CP0DMU5 169 aa11.39□□□□□ -0.59
VPS26A-201ENST00000263559 Q6ZSN1 163 aa11.39□□□□□ -0.59
VPS26A-201ENST00000263559 EDA2RQ9HAV5 297 aa11.39□□□□□ -0.59
VPS26A-201ENST00000263559 C14orf144Q96I85 54 aa11.39□□□□□ -0.59
VPS26A-201ENST00000263559 KIR2DL4Q99706 377 aa11.39□□□□□ -0.59
VPS26A-201ENST00000263559 TRGV1A0A0A0MS02 117 aa11.38□□□□□ -0.59
VPS26A-201ENST00000263559 H7C1H1 209 aa11.38□□□□□ -0.59
VPS26A-201ENST00000263559 IGLC3P0DOY3 106 aa11.38□□□□□ -0.59
VPS26A-201ENST00000263559 C2orf66Q6UXQ4 117 aa11.38□□□□□ -0.59
VPS26A-201ENST00000263559 ZFP2Q6ZN57 461 aa11.38□□□□□ -0.59
VPS26A-201ENST00000263559 DKK2Q9UBU2 259 aa11.38□□□□□ -0.59
VPS26A-201ENST00000263559 PLAC8L1A1L4L8 177 aa11.37□□□□□ -0.59
VPS26A-201ENST00000263559 RHODO00212 210 aa11.37□□□□□ -0.59
VPS26A-201ENST00000263559 Q6ZTI0 123 aa11.37□□□□□ -0.59
VPS26A-201ENST00000263559 C16orf74Q96GX8 76 aa11.37□□□□□ -0.59
VPS26A-201ENST00000263559 SCGB3A1Q96QR1 104 aa11.37□□□□□ -0.59
VPS26A-201ENST00000263559 NOP10Q9NPE3 64 aaKnown RBP11.37□□□□□ -0.59
VPS26A-201ENST00000263559 Q9UF83 564 aa11.37□□□□□ -0.59
VPS26A-201ENST00000263559 ODF1Q14990 250 aa11.36□□□□□ -0.59
VPS26A-201ENST00000263559 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.36□□□□□ -0.59
VPS26A-201ENST00000263559 RRN3P1Q2M238 152 aa11.36□□□□□ -0.59
VPS26A-201ENST00000263559 HSBP1L1C9JCN9 74 aa11.35□□□□□ -0.59
VPS26A-201ENST00000263559 DAZ2Q13117 558 aaKnown RBP11.35□□□□□ -0.59
VPS26A-201ENST00000263559 FBN1P35555 2871 aaKnown RBP11.35□□□□□ -0.59
VPS26A-201ENST00000263559 IGHV3-53P01767 116 aa11.35□□□□□ -0.59
VPS26A-201ENST00000263559 OR4C5Q8NGB2 326 aa11.35□□□□□ -0.59
VPS26A-201ENST00000263559 UQCR10Q9UDW1 63 aa11.35□□□□□ -0.59
VPS26A-201ENST00000263559 PRIMA1Q86XR5 153 aa11.34□□□□□ -0.59
VPS26A-201ENST00000263559 I3L3M4 83 aa11.34□□□□□ -0.59
VPS26A-201ENST00000263559 Q6ZN92 141 aa11.34□□□□□ -0.59
VPS26A-201ENST00000263559 ZNF479Q96JC4 524 aa11.34□□□□□ -0.59
VPS26A-201ENST00000263559 CYSLTR1Q9Y271 337 aa11.34□□□□□ -0.59
VPS26A-201ENST00000263559 TP53TG1Q9Y2A0 90 aa11.34□□□□□ -0.59
VPS26A-201ENST00000263559 TSHBP01222 138 aa11.33□□□□□ -0.59
VPS26A-201ENST00000263559 TNFRSF18Q9Y5U5 241 aa11.33□□□□□ -0.59
VPS26A-201ENST00000263559 WIPF1O43516 503 aa11.33□□□□□ -0.6
VPS26A-201ENST00000263559 RIPPLY3P57055 190 aa11.33□□□□□ -0.6
VPS26A-201ENST00000263559 RPL39P62891 51 aaKnown RBP11.33□□□□□ -0.6
VPS26A-201ENST00000263559 ERASQ7Z444 233 aa11.33□□□□□ -0.6
VPS26A-201ENST00000263559 NEXN-AS1Q8NBZ9 246 aa11.33□□□□□ -0.6
VPS26A-201ENST00000263559 ZMAT4Q9H898 229 aa11.33□□□□□ -0.6
VPS26A-201ENST00000263559 G0S2P27469 103 aa11.32□□□□□ -0.6
VPS26A-201ENST00000263559 STPG4Q8N801 248 aa11.32□□□□□ -0.6
VPS26A-201ENST00000263559 C3orf56Q8N813 242 aa11.32□□□□□ -0.6
VPS26A-201ENST00000263559 OVOL2Q9BRP0 275 aa11.32□□□□□ -0.6
VPS26A-201ENST00000263559 A0A087WX48 190 aa11.31□□□□□ -0.6
VPS26A-201ENST00000263559 TRAV4A0A0B4J268 109 aa11.31□□□□□ -0.6
VPS26A-201ENST00000263559 RHOHQ15669 191 aa11.31□□□□□ -0.6
VPS26A-201ENST00000263559 MRPL35Q9NZE8 188 aaKnown RBP11.31□□□□□ -0.6
VPS26A-201ENST00000263559 ANKRD39Q53RE8 183 aa11.31□□□□□ -0.6
VPS26A-201ENST00000263559 BAALCQ8WXS3 180 aa11.31□□□□□ -0.6
VPS26A-201ENST00000263559 GAGE12BA1L429 117 aa11.3□□□□□ -0.6
VPS26A-201ENST00000263559 IGIPA6NJ69 53 aa11.3□□□□□ -0.6
VPS26A-201ENST00000263559 GAGE7O76087 117 aa11.3□□□□□ -0.6
VPS26A-201ENST00000263559 GAGE12FP0CL80 117 aa11.3□□□□□ -0.6
VPS26A-201ENST00000263559 GAGE12GP0CL81 117 aa11.3□□□□□ -0.6
VPS26A-201ENST00000263559 GAGE12IP0CL82 117 aa11.3□□□□□ -0.6
VPS26A-201ENST00000263559 TP73-AS1Q9UF72 201 aa11.3□□□□□ -0.6
VPS26A-201ENST00000263559 TRAV12-1A0A0B4J245 112 aa11.3□□□□□ -0.6
VPS26A-201ENST00000263559 LINC01549A6NIU2 74 aa11.3□□□□□ -0.6
VPS26A-201ENST00000263559 IGKCP01834 107 aa11.3□□□□□ -0.6
VPS26A-201ENST00000263559 HHLA3Q9XRX5 114 aa11.3□□□□□ -0.6
VPS26A-201ENST00000263559 DPM2O94777 84 aa11.29□□□□□ -0.6
VPS26A-201ENST00000263559 TCTAP57738 103 aa11.29□□□□□ -0.6
VPS26A-201ENST00000263559 DNAJC30Q96LL9 226 aa11.29□□□□□ -0.6
VPS26A-201ENST00000263559 EMP1P54849 157 aa11.29□□□□□ -0.6
VPS26A-201ENST00000263559 CTAG1AP78358 180 aa11.29□□□□□ -0.6
VPS26A-201ENST00000263559 X6R8D5 127 aa11.29□□□□□ -0.6
VPS26A-201ENST00000263559 TRGV2A0A075B6R0 118 aa11.28□□□□□ -0.6
VPS26A-201ENST00000263559 HNRNPA3P51991 378 aaKnown RBP11.28□□□□□ -0.6
VPS26A-201ENST00000263559 C20orf203Q8NBC4 194 aa11.28□□□□□ -0.6
VPS26A-201ENST00000263559 OXLD1Q5BKU9 147 aa11.28□□□□□ -0.6
VPS26A-201ENST00000263559 SHISA2Q6UWI4 295 aa11.28□□□□□ -0.6
VPS26A-201ENST00000263559 KIR2DL5BQ8NHK3 375 aa11.27□□□□□ -0.6
VPS26A-201ENST00000263559 STAB1Q9NY15 2570 aa11.27□□□□□ -0.61
VPS26A-201ENST00000263559 PRSS29PA6NIE9 313 aa11.27□□□□□ -0.61
VPS26A-201ENST00000263559 C12orf54Q6X4T0 127 aa11.27□□□□□ -0.61
VPS26A-201ENST00000263559 TMEM141Q96I45 108 aa11.27□□□□□ -0.61
VPS26A-201ENST00000263559 TIMM17AQ99595 171 aa11.27□□□□□ -0.61
VPS26A-201ENST00000263559 SNHG12Q9BXW3 62 aa11.27□□□□□ -0.61
VPS26A-201ENST00000263559 CHTOPQ9Y3Y2 248 aaKnown RBP11.27□□□□□ -0.61
VPS26A-201ENST00000263559 IGHV3-38A0A0C4DH36 116 aa11.26□□□□□ -0.61
VPS26A-201ENST00000263559 F8VRH5 84 aa11.26□□□□□ -0.61
VPS26A-201ENST00000263559 EREGO14944 169 aa11.26□□□□□ -0.61
VPS26A-201ENST00000263559 SLC25A34Q6PIV7 304 aa11.26□□□□□ -0.61
VPS26A-201ENST00000263559 SLC25A29Q8N8R3 303 aa11.26□□□□□ -0.61
VPS26A-201ENST00000263559 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
VPS26A-201ENST00000263559 K7EQD1 137 aa11.26□□□□□ -0.61
VPS26A-201ENST00000263559 APOC4P55056 127 aa11.26□□□□□ -0.61
VPS26A-201ENST00000263559 DEFB135Q30KP9 77 aa11.26□□□□□ -0.61
VPS26A-201ENST00000263559 ZNRF2Q8NHG8 242 aa11.26□□□□□ -0.61
VPS26A-201ENST00000263559 COX8AP10176 69 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms