RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 KNCNA6PVL3 124 aa12.25□□□□□ -0.45
ZNF541-201ENST00000263351 NXPH4O95158 308 aa12.25□□□□□ -0.45
ZNF541-201ENST00000263351 IGHV3-30P01768 117 aa12.25□□□□□ -0.45
ZNF541-201ENST00000263351 IGHV3-30-5P0DP03 117 aa12.25□□□□□ -0.45
ZNF541-201ENST00000263351 CARD19Q96LW7 228 aa12.25□□□□□ -0.45
ZNF541-201ENST00000263351 JMJD1CQ15652 2540 aa12.24□□□□□ -0.45
ZNF541-201ENST00000263351 A8MZ25 164 aa12.24□□□□□ -0.45
ZNF541-201ENST00000263351 ELANEP08246 267 aa12.24□□□□□ -0.45
ZNF541-201ENST00000263351 FOXI1Q12951 378 aa12.24□□□□□ -0.45
ZNF541-201ENST00000263351 IGHV3-16A0A0C4DH30 117 aa12.24□□□□□ -0.45
ZNF541-201ENST00000263351 IGLV1-40P01703 118 aa12.24□□□□□ -0.45
ZNF541-201ENST00000263351 DLX4Q92988 240 aaPredicted RBP12.24□□□□□ -0.45
ZNF541-201ENST00000263351 SPATA25Q9BR10 227 aa12.24□□□□□ -0.45
ZNF541-201ENST00000263351 A0A0J9YXV3 536 aa12.23□□□□□ -0.45
ZNF541-201ENST00000263351 RBMY1A1P0DJD3 496 aaKnown RBP12.23□□□□□ -0.45
ZNF541-201ENST00000263351 RBMY1CP0DJD4 496 aa12.23□□□□□ -0.45
ZNF541-201ENST00000263351 RBMY1FQ15415 496 aaKnown RBP12.23□□□□□ -0.45
ZNF541-201ENST00000263351 TRPT1Q86TN4 253 aaKnown RBP12.23□□□□□ -0.45
ZNF541-201ENST00000263351 CDIP1Q9H305 208 aa12.23□□□□□ -0.45
ZNF541-201ENST00000263351 IGHV4OR15-8A0A075B7B6 117 aa12.23□□□□□ -0.45
ZNF541-201ENST00000263351 A0A087WW49 117 aa12.23□□□□□ -0.45
ZNF541-201ENST00000263351 M0QY20 66 aa12.23□□□□□ -0.45
ZNF541-201ENST00000263351 MT-ATP8P03928 68 aa12.23□□□□□ -0.45
ZNF541-201ENST00000263351 SYNJ2BPP57105 145 aa12.23□□□□□ -0.45
ZNF541-201ENST00000263351 USMG5Q96IX5 58 aa12.23□□□□□ -0.45
ZNF541-201ENST00000263351 TRAV2A0A0B4J234 112 aa12.22□□□□□ -0.45
ZNF541-201ENST00000263351 J3QQQ9 107 aa12.22□□□□□ -0.45
ZNF541-201ENST00000263351 VCYO14598 125 aa12.22□□□□□ -0.45
ZNF541-201ENST00000263351 ATP5J2P56134 94 aa12.22□□□□□ -0.45
ZNF541-201ENST00000263351 POM121L12Q8N7R1 296 aa12.22□□□□□ -0.45
ZNF541-201ENST00000263351 PRRC2AP48634 2157 aaKnown RBP12.22□□□□□ -0.45
ZNF541-201ENST00000263351 NPC2P61916 151 aa12.22□□□□□ -0.45
ZNF541-201ENST00000263351 ZNF876PQ49A33 203 aa12.22□□□□□ -0.45
ZNF541-201ENST00000263351 CCL19Q99731 98 aa12.22□□□□□ -0.45
ZNF541-201ENST00000263351 A4D1N5 150 aa12.21□□□□□ -0.45
ZNF541-201ENST00000263351 LINC01619G3V211 115 aa12.21□□□□□ -0.45
ZNF541-201ENST00000263351 UBE2D3P61077 147 aa12.21□□□□□ -0.45
ZNF541-201ENST00000263351 UBE2D2P62837 147 aa12.21□□□□□ -0.45
ZNF541-201ENST00000263351 Q6ZSV7 163 aa12.21□□□□□ -0.45
ZNF541-201ENST00000263351 C18orf65Q6ZTR6 163 aa12.21□□□□□ -0.45
ZNF541-201ENST00000263351 C10orf105Q8TEF2 133 aa12.21□□□□□ -0.45
ZNF541-201ENST00000263351 C1QTNF4Q9BXJ3 329 aa12.21□□□□□ -0.45
ZNF541-201ENST00000263351 MED14OSP0DP75 135 aa12.21□□□□□ -0.46
ZNF541-201ENST00000263351 DEFB136Q30KP8 78 aa12.21□□□□□ -0.46
ZNF541-201ENST00000263351 PIMREGQ9BSJ6 248 aa12.21□□□□□ -0.46
ZNF541-201ENST00000263351 NBPF19A0A087WUL8 3843 aa12.2□□□□□ -0.46
ZNF541-201ENST00000263351 NAV2Q8IVL1 2488 aa12.2□□□□□ -0.46
ZNF541-201ENST00000263351 TRAV8-3A0A0A6YYJ7 113 aa12.2□□□□□ -0.46
ZNF541-201ENST00000263351 CFHR3Q02985 330 aa12.2□□□□□ -0.46
ZNF541-201ENST00000263351 TRBV27A0A0K0K1C4 114 aa12.2□□□□□ -0.46
ZNF541-201ENST00000263351 DUX3Q96PT4 197 aa12.2□□□□□ -0.46
ZNF541-201ENST00000263351 BEX4Q9NWD9 120 aaPredicted RBP12.2□□□□□ -0.46
ZNF541-201ENST00000263351 UCNP55089 124 aa12.19□□□□□ -0.46
ZNF541-201ENST00000263351 XGP55808 180 aa12.19□□□□□ -0.46
ZNF541-201ENST00000263351 SLC25A29Q8N8R3 303 aa12.19□□□□□ -0.46
ZNF541-201ENST00000263351 A0A0J9YX75 114 aa12.19□□□□□ -0.46
ZNF541-201ENST00000263351 SCGB1C2P0DMR2 95 aa12.19□□□□□ -0.46
ZNF541-201ENST00000263351 DEFB112Q30KQ8 113 aa12.19□□□□□ -0.46
ZNF541-201ENST00000263351 C9orf85Q96MD7 179 aa12.19□□□□□ -0.46
ZNF541-201ENST00000263351 TMEM238LA0A1B0GVL6 79 aa12.18□□□□□ -0.46
ZNF541-201ENST00000263351 A6NJY4 79 aa12.18□□□□□ -0.46
ZNF541-201ENST00000263351 J3QR89 54 aa12.18□□□□□ -0.46
ZNF541-201ENST00000263351 LGALS9O00182 355 aa12.18□□□□□ -0.46
ZNF541-201ENST00000263351 LGALS3P17931 250 aaKnown RBP12.18□□□□□ -0.46
ZNF541-201ENST00000263351 HERVK_113P61574 105 aa12.18□□□□□ -0.46
ZNF541-201ENST00000263351 C10orf126Q8N4M7 172 aa12.18□□□□□ -0.46
ZNF541-201ENST00000263351 SPXQ9BT56 116 aa12.18□□□□□ -0.46
ZNF541-201ENST00000263351 MSMBP08118 114 aa12.17□□□□□ -0.46
ZNF541-201ENST00000263351 ZNF22P17026 224 aaPredicted RBP12.17□□□□□ -0.46
ZNF541-201ENST00000263351 Q5PR19 223 aa12.17□□□□□ -0.46
ZNF541-201ENST00000263351 MUSTN1Q8IVN3 82 aa12.17□□□□□ -0.46
ZNF541-201ENST00000263351 FAM104AQ969W3 186 aa12.17□□□□□ -0.46
ZNF541-201ENST00000263351 PSMB8P28062 276 aa12.17□□□□□ -0.46
ZNF541-201ENST00000263351 ANKRD29Q8N6D5 301 aa12.17□□□□□ -0.46
ZNF541-201ENST00000263351 TIMM17AQ99595 171 aa12.17□□□□□ -0.46
ZNF541-201ENST00000263351 ID1P41134 155 aa12.16□□□□□ -0.46
ZNF541-201ENST00000263351 Q6ZSN1 163 aa12.16□□□□□ -0.46
ZNF541-201ENST00000263351 ATP6V0BQ99437 205 aa12.16□□□□□ -0.46
ZNF541-201ENST00000263351 IGLV4-3A0A075B6K6 122 aa12.15□□□□□ -0.46
ZNF541-201ENST00000263351 IGHV1OR15-1A0A075B7D0 117 aa12.15□□□□□ -0.46
ZNF541-201ENST00000263351 IGHV3-38A0A0C4DH36 116 aa12.15□□□□□ -0.46
ZNF541-201ENST00000263351 TMEM223A0PJW6 202 aa12.15□□□□□ -0.46
ZNF541-201ENST00000263351 PPP1R17O96001 155 aa12.15□□□□□ -0.46
ZNF541-201ENST00000263351 CCDC168Q8NDH2 2452 aa12.15□□□□□ -0.46
ZNF541-201ENST00000263351 TMEM141Q96I45 108 aa12.15□□□□□ -0.47
ZNF541-201ENST00000263351 ZNF462Q96JM2 2506 aa12.14□□□□□ -0.47
ZNF541-201ENST00000263351 C20orf203Q8NBC4 194 aa12.14□□□□□ -0.47
ZNF541-201ENST00000263351 PRO1854Q9UHT4 67 aa12.14□□□□□ -0.47
ZNF541-201ENST00000263351 C9JAW5 83 aa12.13□□□□□ -0.47
ZNF541-201ENST00000263351 K7EQG2 157 aa12.13□□□□□ -0.47
ZNF541-201ENST00000263351 RHODO00212 210 aa12.13□□□□□ -0.47
ZNF541-201ENST00000263351 SPINK8P0C7L1 97 aa12.13□□□□□ -0.47
ZNF541-201ENST00000263351 CLUHP3Q96NS8 147 aa12.13□□□□□ -0.47
ZNF541-201ENST00000263351 H3BUA1 57 aa12.13□□□□□ -0.47
ZNF541-201ENST00000263351 DAND5Q8N907 189 aa12.13□□□□□ -0.47
ZNF541-201ENST00000263351 CKS1BP61024 79 aa12.12□□□□□ -0.47
ZNF541-201ENST00000263351 ADAMTSL4-AS1Q5T5F5 129 aa12.12□□□□□ -0.47
ZNF541-201ENST00000263351 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.11□□□□□ -0.47
ZNF541-201ENST00000263351 TRBV6-5A0A0K0K1A5 114 aa12.11□□□□□ -0.47
ZNF541-201ENST00000263351 IGKV2-29A2NJV5 120 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms