RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PCNX2A6NKB5 2137 aa9.22□□□□□ -0.93
SMG6-201ENST00000263073 H0YGX0 51 aa9.22□□□□□ -0.93
SMG6-201ENST00000263073 CHKB-CPT1BH3BT56 60 aa9.22□□□□□ -0.93
SMG6-201ENST00000263073 PIFOQ8TCI5 191 aa9.22□□□□□ -0.93
SMG6-201ENST00000263073 IGF1P05019 195 aa9.21□□□□□ -0.93
SMG6-201ENST00000263073 ZNF295-AS1Q8N0V1 137 aa9.21□□□□□ -0.93
SMG6-201ENST00000263073 Q8N7P7 452 aa9.21□□□□□ -0.93
SMG6-201ENST00000263073 MAPKAPK5-AS1Q8N8E1 139 aa9.21□□□□□ -0.93
SMG6-201ENST00000263073 ZGRF1Q86YA3 2104 aa9.21□□□□□ -0.94
SMG6-201ENST00000263073 TRBV7-3A0A075B6L6 115 aa9.21□□□□□ -0.94
SMG6-201ENST00000263073 H3BUA1 57 aa9.21□□□□□ -0.94
SMG6-201ENST00000263073 NDUFV3P56181 108 aaKnown RBP9.21□□□□□ -0.94
SMG6-201ENST00000263073 A0A0U1RQV1 116 aa9.2□□□□□ -0.94
SMG6-201ENST00000263073 DAZ2Q13117 558 aaKnown RBP9.2□□□□□ -0.94
SMG6-201ENST00000263073 DAZ4Q86SG3 579 aaKnown RBP9.2□□□□□ -0.94
SMG6-201ENST00000263073 DAZ3Q9NR90 486 aaKnown RBP9.2□□□□□ -0.94
SMG6-201ENST00000263073 IGHV1-58A0A0C4DH39 117 aa9.2□□□□□ -0.94
SMG6-201ENST00000263073 LINC01548A6NM66 108 aa9.2□□□□□ -0.94
SMG6-201ENST00000263073 BRWD1-AS2P59051 145 aa9.2□□□□□ -0.94
SMG6-201ENST00000263073 A0A1B0GXF2 115 aa9.2□□□□□ -0.94
SMG6-201ENST00000263073 SPANXB1Q9NS25 103 aaPredicted RBP9.2□□□□□ -0.94
SMG6-201ENST00000263073 Q6ZSR3 168 aa9.2□□□□□ -0.94
SMG6-201ENST00000263073 C16orf74Q96GX8 76 aa9.2□□□□□ -0.94
SMG6-201ENST00000263073 SIRPDQ9H106 197 aa9.19□□□□□ -0.94
SMG6-201ENST00000263073 HHLA3Q9XRX5 114 aa9.19□□□□□ -0.94
SMG6-201ENST00000263073 TIRAPP58753 221 aa9.19□□□□□ -0.94
SMG6-201ENST00000263073 KIF26AQ9ULI4 1882 aaPredicted RBP9.19□□□□□ -0.94
SMG6-201ENST00000263073 NDUFC2O95298 119 aa9.19□□□□□ -0.94
SMG6-201ENST00000263073 A0A0J9YXY3 114 aa9.18□□□□□ -0.94
SMG6-201ENST00000263073 IGLC6P0CF74 106 aa9.18□□□□□ -0.94
SMG6-201ENST00000263073 PLA2G2CQ5R387 149 aa9.18□□□□□ -0.94
SMG6-201ENST00000263073 SPTSSBQ8NFR3 76 aa9.18□□□□□ -0.94
SMG6-201ENST00000263073 UPK3BQ9BT76 320 aa9.18□□□□□ -0.94
SMG6-201ENST00000263073 MLST8Q9BVC4 326 aa9.18□□□□□ -0.94
SMG6-201ENST00000263073 FAM110AQ9BQ89 295 aa9.18□□□□□ -0.94
SMG6-201ENST00000263073 J3QLI3 93 aa9.17□□□□□ -0.94
SMG6-201ENST00000263073 KLK12Q9UKR0 248 aa9.17□□□□□ -0.94
SMG6-201ENST00000263073 RIF1Q5UIP0 2472 aaKnown RBP9.17□□□□□ -0.94
SMG6-201ENST00000263073 A8MZ25 164 aa9.17□□□□□ -0.94
SMG6-201ENST00000263073 FANCD2OSQ96PS1 177 aa9.17□□□□□ -0.94
SMG6-201ENST00000263073 DEFB135Q30KP9 77 aa9.17□□□□□ -0.94
SMG6-201ENST00000263073 C20orf197Q8N268 126 aa9.17□□□□□ -0.94
SMG6-201ENST00000263073 RMI2Q96E14 147 aa9.17□□□□□ -0.94
SMG6-201ENST00000263073 HIGD2BQ4VC39 106 aa9.16□□□□□ -0.94
SMG6-201ENST00000263073 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
SMG6-201ENST00000263073 MIAQ16674 131 aa9.16□□□□□ -0.94
SMG6-201ENST00000263073 MP68P56378 58 aa9.16□□□□□ -0.94
SMG6-201ENST00000263073 RBX1P62877 108 aa9.16□□□□□ -0.94
SMG6-201ENST00000263073 H3BT86 120 aa9.16□□□□□ -0.94
SMG6-201ENST00000263073 TANC2Q9HCD6 1990 aa9.15□□□□□ -0.94
SMG6-201ENST00000263073 PIK3CD-AS1Q5SR53 167 aa9.15□□□□□ -0.94
SMG6-201ENST00000263073 IGLV1-47P01700 117 aa9.15□□□□□ -0.94
SMG6-201ENST00000263073 SPAG11BQ08648 103 aa9.15□□□□□ -0.94
SMG6-201ENST00000263073 RNF138Q8WVD3 245 aa9.15□□□□□ -0.94
SMG6-201ENST00000263073 MBD6Q96DN6 1003 aa9.15□□□□□ -0.94
SMG6-201ENST00000263073 CRIP3Q6Q6R5 217 aa9.15□□□□□ -0.95
SMG6-201ENST00000263073 C20orf173Q96LM9 149 aa9.14□□□□□ -0.95
SMG6-201ENST00000263073 ENHOQ6UWT2 76 aa9.14□□□□□ -0.95
SMG6-201ENST00000263073 PKIGQ9Y2B9 76 aa9.14□□□□□ -0.95
SMG6-201ENST00000263073 ZNF106Q9H2Y7 1883 aaKnown RBP9.14□□□□□ -0.95
SMG6-201ENST00000263073 CCDC140Q96MF4 163 aa9.14□□□□□ -0.95
SMG6-201ENST00000263073 YPEL4Q96NS1 127 aa9.14□□□□□ -0.95
SMG6-201ENST00000263073 F8W735 103 aaPredicted RBP9.14□□□□□ -0.95
SMG6-201ENST00000263073 CRIP1P50238 77 aa9.14□□□□□ -0.95
SMG6-201ENST00000263073 PROK1P58294 105 aa9.14□□□□□ -0.95
SMG6-201ENST00000263073 A0A1W2PNU3 283 aaPredicted RBP9.14□□□□□ -0.95
SMG6-201ENST00000263073 H0Y9J4 135 aa9.14□□□□□ -0.95
SMG6-201ENST00000263073 RNF152Q8N8N0 203 aa9.14□□□□□ -0.95
SMG6-201ENST00000263073 DIRC1Q969H9 104 aa9.14□□□□□ -0.95
SMG6-201ENST00000263073 P0C879 139 aa9.13□□□□□ -0.95
SMG6-201ENST00000263073 LINC00467Q9BRT7 94 aa9.13□□□□□ -0.95
SMG6-201ENST00000263073 A0A096LNI7 61 aa9.13□□□□□ -0.95
SMG6-201ENST00000263073 JMJD7-PLA2G4BH0Y9G9 81 aa9.13□□□□□ -0.95
SMG6-201ENST00000263073 TMEM263Q8WUH6 116 aaKnown RBP9.13□□□□□ -0.95
SMG6-201ENST00000263073 NDUFA1O15239 70 aa9.12□□□□□ -0.95
SMG6-201ENST00000263073 TRIAP1O43715 76 aa9.12□□□□□ -0.95
SMG6-201ENST00000263073 NEXN-AS1Q8NBZ9 246 aa9.12□□□□□ -0.95
SMG6-201ENST00000263073 TMEM256-PLSCR3K7ERE1 68 aa9.12□□□□□ -0.95
SMG6-201ENST00000263073 INSL3P51460 131 aa9.12□□□□□ -0.95
SMG6-201ENST00000263073 LINC00643Q86TS7 51 aa9.12□□□□□ -0.95
SMG6-201ENST00000263073 C10orf105Q8TEF2 133 aa9.12□□□□□ -0.95
SMG6-201ENST00000263073 UBE2AP49459 152 aa9.11□□□□□ -0.95
SMG6-201ENST00000263073 ADORA2A-AS1P86434 159 aa9.11□□□□□ -0.95
SMG6-201ENST00000263073 DCANP1Q8TF63 244 aa9.11□□□□□ -0.95
SMG6-201ENST00000263073 SPANXCQ9NY87 97 aa9.11□□□□□ -0.95
SMG6-201ENST00000263073 MRPS12O15235 138 aaKnown RBP9.11□□□□□ -0.95
SMG6-201ENST00000263073 CDKN2A-AS1Q9UH64 79 aa9.11□□□□□ -0.95
SMG6-201ENST00000263073 SPART-AS1P0CW21 52 aa9.11□□□□□ -0.95
SMG6-201ENST00000263073 Q6ZTI0 123 aa9.11□□□□□ -0.95
SMG6-201ENST00000263073 A0A0J9YX75 114 aa9.11□□□□□ -0.95
SMG6-201ENST00000263073 TRBV6-1A0A0K0K1D8 114 aa9.11□□□□□ -0.95
SMG6-201ENST00000263073 CCDC179H3BU77 68 aa9.11□□□□□ -0.95
SMG6-201ENST00000263073 CREBBPQ92793 2442 aa9.1□□□□□ -0.95
SMG6-201ENST00000263073 LINC00269Q8N2A0 174 aa9.1□□□□□ -0.95
SMG6-201ENST00000263073 NUP210Q8TEM1 1887 aaPredicted RBP9.1□□□□□ -0.95
SMG6-201ENST00000263073 GAS8-AS1O95177 125 aa9.1□□□□□ -0.95
SMG6-201ENST00000263073 A0A0J9YWU9 116 aa9.09□□□□□ -0.95
SMG6-201ENST00000263073 FREM1Q5H8C1 2179 aa9.09□□□□□ -0.95
SMG6-201ENST00000263073 NDUFB1O75438 58 aa9.09□□□□□ -0.95
SMG6-201ENST00000263073 TM2D2Q9BX73 214 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms