RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 TRBV7-3A0A075B6L6 115 aa12.18□□□□□ -0.46
SHANK3-201ENST00000262795 SIRPDQ9H106 197 aa12.18□□□□□ -0.46
SHANK3-201ENST00000262795 IGKV4-1P06312 121 aa12.18□□□□□ -0.46
SHANK3-201ENST00000262795 C16orf54Q6UWD8 224 aa12.17□□□□□ -0.46
SHANK3-201ENST00000262795 FAM208BQ5VWN6 2430 aa12.17□□□□□ -0.46
SHANK3-201ENST00000262795 ETV2O00321 342 aaPredicted RBP12.17□□□□□ -0.46
SHANK3-201ENST00000262795 LINC01548A6NM66 108 aa12.16□□□□□ -0.46
SHANK3-201ENST00000262795 NANOS2P60321 138 aaKnown RBP12.16□□□□□ -0.46
SHANK3-201ENST00000262795 C12orf74Q32Q52 190 aa12.16□□□□□ -0.46
SHANK3-201ENST00000262795 C10orf99Q6UWK7 81 aa12.16□□□□□ -0.46
SHANK3-201ENST00000262795 TMEM14CQ9P0S9 112 aa12.16□□□□□ -0.46
SHANK3-201ENST00000262795 LINC00173Q6ZV60 143 aa12.16□□□□□ -0.46
SHANK3-201ENST00000262795 J3QQQ9 107 aa12.16□□□□□ -0.46
SHANK3-201ENST00000262795 P0DMU3 169 aa12.16□□□□□ -0.46
SHANK3-201ENST00000262795 FAM231AP0DMU4 169 aa12.16□□□□□ -0.46
SHANK3-201ENST00000262795 FAM231CP0DMU5 169 aa12.16□□□□□ -0.46
SHANK3-201ENST00000262795 SPINK6Q6UWN8 80 aa12.16□□□□□ -0.46
SHANK3-201ENST00000262795 ORMDL1Q9P0S3 153 aa12.16□□□□□ -0.46
SHANK3-201ENST00000262795 ZNF106Q9H2Y7 1883 aaKnown RBP12.16□□□□□ -0.46
SHANK3-201ENST00000262795 A0A0J9YWU9 116 aa12.15□□□□□ -0.46
SHANK3-201ENST00000262795 A6NDX4 124 aa12.15□□□□□ -0.46
SHANK3-201ENST00000262795 MED13LQ71F56 2210 aa12.15□□□□□ -0.46
SHANK3-201ENST00000262795 PRAC2D3DTV9 90 aa12.15□□□□□ -0.47
SHANK3-201ENST00000262795 PPDPFQ9H3Y8 114 aa12.14□□□□□ -0.47
SHANK3-201ENST00000262795 FHL1Q13642 323 aa12.14□□□□□ -0.47
SHANK3-201ENST00000262795 MDFICQ9P1T7 246 aa12.14□□□□□ -0.47
SHANK3-201ENST00000262795 PRO0255Q9UI72 69 aa12.14□□□□□ -0.47
SHANK3-201ENST00000262795 WFDC10AQ9H1F0 79 aa12.14□□□□□ -0.47
SHANK3-201ENST00000262795 DSCAMO60469 2012 aa12.14□□□□□ -0.47
SHANK3-201ENST00000262795 IGLV2-8P01709 118 aa12.13□□□□□ -0.47
SHANK3-201ENST00000262795 LGALS9BQ3B8N2 356 aa12.13□□□□□ -0.47
SHANK3-201ENST00000262795 LGALS9CQ6DKI2 356 aa12.13□□□□□ -0.47
SHANK3-201ENST00000262795 TMEM263Q8WUH6 116 aaKnown RBP12.13□□□□□ -0.47
SHANK3-201ENST00000262795 TANC2Q9HCD6 1990 aa12.13□□□□□ -0.47
SHANK3-201ENST00000262795 RSPO1Q2MKA7 263 aaPredicted RBP12.13□□□□□ -0.47
SHANK3-201ENST00000262795 Q6ZSV7 163 aa12.13□□□□□ -0.47
SHANK3-201ENST00000262795 C18orf65Q6ZTR6 163 aa12.13□□□□□ -0.47
SHANK3-201ENST00000262795 DENND4CQ5VZ89 1909 aa12.13□□□□□ -0.47
SHANK3-201ENST00000262795 MALRD1Q5VYJ5 2156 aa12.13□□□□□ -0.47
SHANK3-201ENST00000262795 Q6ZS49 121 aa12.13□□□□□ -0.47
SHANK3-201ENST00000262795 TECTAO75443 2155 aa12.12□□□□□ -0.47
SHANK3-201ENST00000262795 NUPR2A6NF83 97 aa12.12□□□□□ -0.47
SHANK3-201ENST00000262795 SND1-IT1Q9HBX3 110 aa12.12□□□□□ -0.47
SHANK3-201ENST00000262795 TP53TG3Q9ULZ0 132 aa12.12□□□□□ -0.47
SHANK3-201ENST00000262795 ANKRD39Q53RE8 183 aa12.12□□□□□ -0.47
SHANK3-201ENST00000262795 RPL39P62891 51 aaKnown RBP12.12□□□□□ -0.47
SHANK3-201ENST00000262795 IGLV11-55A0A075B6I3 123 aa12.11□□□□□ -0.47
SHANK3-201ENST00000262795 TEX22C9J3V5 150 aa12.11□□□□□ -0.47
SHANK3-201ENST00000262795 CASC2Q6XLA1 102 aa12.11□□□□□ -0.47
SHANK3-201ENST00000262795 Q6ZTI0 123 aa12.11□□□□□ -0.47
SHANK3-201ENST00000262795 ZFP2Q6ZN57 461 aa12.11□□□□□ -0.47
SHANK3-201ENST00000262795 RNF152Q8N8N0 203 aa12.11□□□□□ -0.47
SHANK3-201ENST00000262795 OBSL1O75147 1896 aa12.11□□□□□ -0.47
SHANK3-201ENST00000262795 K7EIM0 57 aa12.1□□□□□ -0.47
SHANK3-201ENST00000262795 NCOA6Q14686 2063 aaPredicted RBP12.1□□□□□ -0.47
SHANK3-201ENST00000262795 MP68P56378 58 aa12.1□□□□□ -0.47
SHANK3-201ENST00000262795 I3L2K1 104 aa12.1□□□□□ -0.47
SHANK3-201ENST00000262795 HIVEP2P31629 2446 aa12.1□□□□□ -0.47
SHANK3-201ENST00000262795 TRAV10A0A0B4J240 114 aa12.1□□□□□ -0.47
SHANK3-201ENST00000262795 WFDC2Q14508 124 aa12.09□□□□□ -0.47
SHANK3-201ENST00000262795 IGLV2-11P01706 119 aa12.09□□□□□ -0.47
SHANK3-201ENST00000262795 CEMP1Q6PRD7 247 aaPredicted RBP12.09□□□□□ -0.47
SHANK3-201ENST00000262795 KIR2DL5BA0A0G2JN68 375 aa12.08□□□□□ -0.48
SHANK3-201ENST00000262795 KIR2DL5BA0A0G2JPC4 375 aa12.08□□□□□ -0.48
SHANK3-201ENST00000262795 KIR2DL5AQ8N109 375 aa12.08□□□□□ -0.48
SHANK3-201ENST00000262795 REG3AQ06141 175 aa12.08□□□□□ -0.48
SHANK3-201ENST00000262795 PLXNB3Q9ULL4 1909 aa12.08□□□□□ -0.48
SHANK3-201ENST00000262795 CEP192Q8TEP8 1941 aa12.08□□□□□ -0.48
SHANK3-201ENST00000262795 SIVA1O15304 175 aa12.08□□□□□ -0.48
SHANK3-201ENST00000262795 RBAKDNA6NC62 111 aa12.07□□□□□ -0.48
SHANK3-201ENST00000262795 ATOX1O00244 68 aa12.07□□□□□ -0.48
SHANK3-201ENST00000262795 A0A0B4J2C4 111 aa12.07□□□□□ -0.48
SHANK3-201ENST00000262795 SPANXDQ9BXN6 97 aa12.07□□□□□ -0.48
SHANK3-201ENST00000262795 OPRPNQ99935 248 aaPredicted RBP12.07□□□□□ -0.48
SHANK3-201ENST00000262795 MSRB1Q9NZV6 116 aa12.07□□□□□ -0.48
SHANK3-201ENST00000262795 COL4A4P53420 1690 aaPredicted RBP12.07□□□□□ -0.48
SHANK3-201ENST00000262795 TNFRSF13BO14836 293 aaPredicted RBP12.07□□□□□ -0.48
SHANK3-201ENST00000262795 ODF3L1Q8IXM7 274 aa12.06□□□□□ -0.48
SHANK3-201ENST00000262795 IGLV9-49A0A0B4J1Y8 123 aa12.06□□□□□ -0.48
SHANK3-201ENST00000262795 F8VRH5 84 aa12.06□□□□□ -0.48
SHANK3-201ENST00000262795 KRTAP10-9P60411 292 aa12.06□□□□□ -0.48
SHANK3-201ENST00000262795 NREPQ16612 68 aa12.06□□□□□ -0.48
SHANK3-201ENST00000262795 CACNA1HO95180 2353 aa12.06□□□□□ -0.48
SHANK3-201ENST00000262795 FGF23Q9GZV9 251 aaPredicted RBP12.06□□□□□ -0.48
SHANK3-201ENST00000262795 C20orf78Q9BR46 151 aa12.06□□□□□ -0.48
SHANK3-201ENST00000262795 DIRC1Q969H9 104 aa12.06□□□□□ -0.48
SHANK3-201ENST00000262795 CRYGBP07316 175 aa12.05□□□□□ -0.48
SHANK3-201ENST00000262795 PRR4Q16378 134 aa12.05□□□□□ -0.48
SHANK3-201ENST00000262795 LMO4P61968 165 aa12.05□□□□□ -0.48
SHANK3-201ENST00000262795 SPANXCQ9NY87 97 aa12.05□□□□□ -0.48
SHANK3-201ENST00000262795 TRAV23DV6A0A075B6W5 121 aa12.05□□□□□ -0.48
SHANK3-201ENST00000262795 A0A0J9YXV3 536 aa12.05□□□□□ -0.48
SHANK3-201ENST00000262795 CFPP27918 469 aa12.05□□□□□ -0.48
SHANK3-201ENST00000262795 LINC00526Q96FQ7 95 aa12.04□□□□□ -0.48
SHANK3-201ENST00000262795 BRI3O95415 125 aa12.03□□□□□ -0.48
SHANK3-201ENST00000262795 SHANK1Q9Y566 2161 aa12.03□□□□□ -0.48
SHANK3-201ENST00000262795 G3V4G9 280 aa12.03□□□□□ -0.48
SHANK3-201ENST00000262795 KIR2DL5BQ8NHK3 375 aa12.03□□□□□ -0.48
SHANK3-201ENST00000262795 TAX1BP3O14907 124 aa12.02□□□□□ -0.48
SHANK3-201ENST00000262795 CFC1BP0CG36 223 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms