RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 TMEM141Q96I45 108 aa11.85□□□□□ -0.51
LMNB1-201ENST00000261366 MOB4Q9Y3A3 225 aa11.85□□□□□ -0.51
LMNB1-201ENST00000261366 NACAE9PAV3 2078 aa11.85□□□□□ -0.51
LMNB1-201ENST00000261366 PKD1L2Q7Z442 2459 aa11.84□□□□□ -0.51
LMNB1-201ENST00000261366 TRAV8-3A0A0A6YYJ7 113 aa11.84□□□□□ -0.51
LMNB1-201ENST00000261366 A8MZ25 164 aa11.84□□□□□ -0.51
LMNB1-201ENST00000261366 NDUFA4O00483 81 aa11.84□□□□□ -0.51
LMNB1-201ENST00000261366 SNCGO76070 127 aa11.84□□□□□ -0.51
LMNB1-201ENST00000261366 Q8N1Y9 231 aa11.84□□□□□ -0.51
LMNB1-201ENST00000261366 TIMM17AQ99595 171 aa11.84□□□□□ -0.51
LMNB1-201ENST00000261366 ABCA2Q9BZC7 2435 aa11.84□□□□□ -0.51
LMNB1-201ENST00000261366 TMEM263Q8WUH6 116 aaKnown RBP11.84□□□□□ -0.51
LMNB1-201ENST00000261366 IGHV4OR15-8A0A075B7B6 117 aa11.83□□□□□ -0.52
LMNB1-201ENST00000261366 A0A087WW49 117 aa11.83□□□□□ -0.52
LMNB1-201ENST00000261366 FAM223BA6NKX1 122 aa11.83□□□□□ -0.52
LMNB1-201ENST00000261366 FAM223AQ8IWN6 122 aa11.83□□□□□ -0.52
LMNB1-201ENST00000261366 GAGE2BQ13066 116 aa11.83□□□□□ -0.52
LMNB1-201ENST00000261366 TMEM95Q3KNT9 176 aa11.83□□□□□ -0.52
LMNB1-201ENST00000261366 GAGE2EQ4V326 116 aa11.83□□□□□ -0.52
LMNB1-201ENST00000261366 SBSPONQ8IVN8 264 aa11.83□□□□□ -0.52
LMNB1-201ENST00000261366 GAGE2DQ9UEU5 116 aa11.83□□□□□ -0.52
LMNB1-201ENST00000261366 PRRC2AP48634 2157 aaKnown RBP11.82□□□□□ -0.52
LMNB1-201ENST00000261366 P0DMU3 169 aa11.82□□□□□ -0.52
LMNB1-201ENST00000261366 FAM231AP0DMU4 169 aa11.82□□□□□ -0.52
LMNB1-201ENST00000261366 FAM231CP0DMU5 169 aa11.82□□□□□ -0.52
LMNB1-201ENST00000261366 ZNF22P17026 224 aaPredicted RBP11.82□□□□□ -0.52
LMNB1-201ENST00000261366 FAM19A4Q96LR4 140 aa11.82□□□□□ -0.52
LMNB1-201ENST00000261366 VCX2Q9H322 139 aa11.82□□□□□ -0.52
LMNB1-201ENST00000261366 TMEM223A0PJW6 202 aa11.82□□□□□ -0.52
LMNB1-201ENST00000261366 LMO4P61968 165 aa11.82□□□□□ -0.52
LMNB1-201ENST00000261366 TMEM262E9PQX1 116 aa11.81□□□□□ -0.52
LMNB1-201ENST00000261366 SPINK13Q1W4C9 94 aa11.81□□□□□ -0.52
LMNB1-201ENST00000261366 C2CD3Q4AC94 2353 aa11.81□□□□□ -0.52
LMNB1-201ENST00000261366 RHODO00212 210 aa11.81□□□□□ -0.52
LMNB1-201ENST00000261366 LINC01620Q4KN68 170 aa11.81□□□□□ -0.52
LMNB1-201ENST00000261366 CFAP46Q8IYW2 2715 aa11.81□□□□□ -0.52
LMNB1-201ENST00000261366 TRBV27A0A0K0K1C4 114 aa11.81□□□□□ -0.52
LMNB1-201ENST00000261366 TRIAP1O43715 76 aa11.81□□□□□ -0.52
LMNB1-201ENST00000261366 PRM2P04554 102 aa11.81□□□□□ -0.52
LMNB1-201ENST00000261366 MED14OSP0DP75 135 aa11.81□□□□□ -0.52
LMNB1-201ENST00000261366 LEPROTO15243 131 aa11.8□□□□□ -0.52
LMNB1-201ENST00000261366 H3BUX3 64 aa11.8□□□□□ -0.52
LMNB1-201ENST00000261366 M0QY20 66 aa11.8□□□□□ -0.52
LMNB1-201ENST00000261366 NHLRC4P0CG21 123 aaPredicted RBP11.8□□□□□ -0.52
LMNB1-201ENST00000261366 GNLYP22749 145 aa11.8□□□□□ -0.52
LMNB1-201ENST00000261366 KLLNB2CW77 178 aa11.79□□□□□ -0.52
LMNB1-201ENST00000261366 CCDC179H3BU77 68 aa11.79□□□□□ -0.52
LMNB1-201ENST00000261366 C19orf84I3L1E1 186 aa11.79□□□□□ -0.52
LMNB1-201ENST00000261366 PROK1P58294 105 aa11.79□□□□□ -0.52
LMNB1-201ENST00000261366 TTC32Q5I0X7 151 aa11.79□□□□□ -0.52
LMNB1-201ENST00000261366 DAND5Q8N907 189 aa11.79□□□□□ -0.52
LMNB1-201ENST00000261366 PRORYQ9H606 182 aa11.79□□□□□ -0.52
LMNB1-201ENST00000261366 A0A0J9YXY3 114 aa11.79□□□□□ -0.52
LMNB1-201ENST00000261366 IGHV4-38-2P0DP08 117 aa11.79□□□□□ -0.52
LMNB1-201ENST00000261366 GAGE5Q13069 117 aa11.79□□□□□ -0.52
LMNB1-201ENST00000261366 GAGE6Q13070 117 aa11.79□□□□□ -0.52
LMNB1-201ENST00000261366 CLEC2BQ92478 149 aa11.79□□□□□ -0.52
LMNB1-201ENST00000261366 DAZ1Q9NQZ3 744 aaKnown RBP11.79□□□□□ -0.52
LMNB1-201ENST00000261366 KNCNA6PVL3 124 aa11.78□□□□□ -0.52
LMNB1-201ENST00000261366 NXPH4O95158 308 aa11.78□□□□□ -0.52
LMNB1-201ENST00000261366 ATXN8Q156A1 80 aa11.78□□□□□ -0.52
LMNB1-201ENST00000261366 SVIPQ8NHG7 77 aa11.78□□□□□ -0.52
LMNB1-201ENST00000261366 CITED1Q99966 193 aa11.78□□□□□ -0.52
LMNB1-201ENST00000261366 KLK9Q2XQG4 91 aa11.78□□□□□ -0.52
LMNB1-201ENST00000261366 TRAV8-4A0A0B4J246 113 aa11.77□□□□□ -0.52
LMNB1-201ENST00000261366 IGHV3-30-3P0DP02 117 aa11.77□□□□□ -0.52
LMNB1-201ENST00000261366 CD28P10747 220 aa11.77□□□□□ -0.52
LMNB1-201ENST00000261366 DUX5Q96PT3 197 aa11.77□□□□□ -0.52
LMNB1-201ENST00000261366 IGLV4-3A0A075B6K6 122 aa11.77□□□□□ -0.53
LMNB1-201ENST00000261366 NDUFV3P56181 108 aaKnown RBP11.77□□□□□ -0.53
LMNB1-201ENST00000261366 ADAMTSL4-AS1Q5T5F5 129 aa11.77□□□□□ -0.53
LMNB1-201ENST00000261366 C10orf99Q6UWK7 81 aa11.77□□□□□ -0.53
LMNB1-201ENST00000261366 POM121L12Q8N7R1 296 aa11.77□□□□□ -0.53
LMNB1-201ENST00000261366 C3orf56Q8N813 242 aa11.77□□□□□ -0.53
LMNB1-201ENST00000261366 C15orf53Q8NAA6 179 aa11.77□□□□□ -0.53
LMNB1-201ENST00000261366 Q9UF83 564 aa11.77□□□□□ -0.53
LMNB1-201ENST00000261366 IGHV3-16A0A0C4DH30 117 aa11.77□□□□□ -0.53
LMNB1-201ENST00000261366 A0A0U1RRA0 63 aa11.77□□□□□ -0.53
LMNB1-201ENST00000261366 LGALS9O00182 355 aa11.77□□□□□ -0.53
LMNB1-201ENST00000261366 C2orf82Q6UX34 121 aa11.77□□□□□ -0.53
LMNB1-201ENST00000261366 C20orf203Q8NBC4 194 aa11.77□□□□□ -0.53
LMNB1-201ENST00000261366 C19orf54Q5BKX5 351 aa11.76□□□□□ -0.53
LMNB1-201ENST00000261366 APRG1Q8IVJ8 170 aa11.76□□□□□ -0.53
LMNB1-201ENST00000261366 TIMM21Q9BVV7 248 aa11.76□□□□□ -0.53
LMNB1-201ENST00000261366 DUX3Q96PT4 197 aa11.76□□□□□ -0.53
LMNB1-201ENST00000261366 ID1P41134 155 aa11.75□□□□□ -0.53
LMNB1-201ENST00000261366 FLNCQ14315 2725 aa11.75□□□□□ -0.53
LMNB1-201ENST00000261366 USP9YO00507 2555 aaPredicted RBP11.75□□□□□ -0.53
LMNB1-201ENST00000261366 A0A0B4J2C4 111 aa11.75□□□□□ -0.53
LMNB1-201ENST00000261366 H3BMM0 161 aa11.74□□□□□ -0.53
LMNB1-201ENST00000261366 RPL32P62910 135 aaKnown RBP11.74□□□□□ -0.53
LMNB1-201ENST00000261366 DCANP1Q8TF63 244 aa11.74□□□□□ -0.53
LMNB1-201ENST00000261366 UBE2WQ96B02 151 aa11.74□□□□□ -0.53
LMNB1-201ENST00000261366 IGHV1-69P01742 117 aa11.74□□□□□ -0.53
LMNB1-201ENST00000261366 ODF3Q96PU9 254 aa11.74□□□□□ -0.53
LMNB1-201ENST00000261366 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.73□□□□□ -0.53
LMNB1-201ENST00000261366 I3L3M4 83 aa11.73□□□□□ -0.53
LMNB1-201ENST00000261366 M0R2P5 195 aa11.73□□□□□ -0.53
LMNB1-201ENST00000261366 IFITM1P13164 125 aa11.73□□□□□ -0.53
LMNB1-201ENST00000261366 ZANQ9Y493 2812 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 278 ms