RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 UFSP1Q6NVU6 142 aa12.52□□□□□ -0.41
SRSF1-201ENST00000258962 C16orf74Q96GX8 76 aa12.52□□□□□ -0.41
SRSF1-201ENST00000258962 DNAH9Q9NYC9 4486 aa12.51□□□□□ -0.41
SRSF1-201ENST00000258962 A0A096LNJ9 63 aa12.51□□□□□ -0.41
SRSF1-201ENST00000258962 A8MWV9 139 aa12.51□□□□□ -0.41
SRSF1-201ENST00000258962 F5H697 171 aa12.51□□□□□ -0.41
SRSF1-201ENST00000258962 ZNF56Q15929 161 aa12.51□□□□□ -0.41
SRSF1-201ENST00000258962 KIR2DL5BA0A0G2JN68 375 aa12.5□□□□□ -0.41
SRSF1-201ENST00000258962 KIR2DL5BA0A0G2JPC4 375 aa12.5□□□□□ -0.41
SRSF1-201ENST00000258962 SYS1-DBNDD2H3BUS1 97 aa12.5□□□□□ -0.41
SRSF1-201ENST00000258962 G0S2P27469 103 aa12.5□□□□□ -0.41
SRSF1-201ENST00000258962 FCER1GP30273 86 aa12.5□□□□□ -0.41
SRSF1-201ENST00000258962 RRN3P1Q2M238 152 aa12.5□□□□□ -0.41
SRSF1-201ENST00000258962 CFAP126Q5VTH2 177 aa12.5□□□□□ -0.41
SRSF1-201ENST00000258962 KIR2DL5AQ8N109 375 aa12.5□□□□□ -0.41
SRSF1-201ENST00000258962 KIR2DL5BQ8NHK3 375 aa12.5□□□□□ -0.41
SRSF1-201ENST00000258962 NDUFAF3Q9BU61 184 aa12.5□□□□□ -0.41
SRSF1-201ENST00000258962 M0QY20 66 aa12.49□□□□□ -0.41
SRSF1-201ENST00000258962 RS1O15537 224 aa12.49□□□□□ -0.41
SRSF1-201ENST00000258962 SUMO2P61956 95 aaKnown RBP12.49□□□□□ -0.41
SRSF1-201ENST00000258962 LINC00173Q6ZV60 143 aa12.49□□□□□ -0.41
SRSF1-201ENST00000258962 SPATA12Q7Z6I5 190 aa12.49□□□□□ -0.41
SRSF1-201ENST00000258962 ZNF664Q8N3J9 261 aa12.49□□□□□ -0.41
SRSF1-201ENST00000258962 SMIM2Q9BVW6 85 aa12.49□□□□□ -0.41
SRSF1-201ENST00000258962 RPL32P62910 135 aaKnown RBP12.48□□□□□ -0.41
SRSF1-201ENST00000258962 DAZ2Q13117 558 aaKnown RBP12.48□□□□□ -0.41
SRSF1-201ENST00000258962 LAGE3Q14657 143 aa12.48□□□□□ -0.41
SRSF1-201ENST00000258962 RETNQ9HD89 108 aa12.48□□□□□ -0.41
SRSF1-201ENST00000258962 IGHV3-73A0A0B4J1V6 119 aa12.47□□□□□ -0.41
SRSF1-201ENST00000258962 LINC01549A6NIU2 74 aa12.47□□□□□ -0.41
SRSF1-201ENST00000258962 ORMDL2Q53FV1 153 aa12.47□□□□□ -0.41
SRSF1-201ENST00000258962 Q6ZTI0 123 aa12.47□□□□□ -0.41
SRSF1-201ENST00000258962 Q8N976 141 aa12.47□□□□□ -0.41
SRSF1-201ENST00000258962 NOP10Q9NPE3 64 aaKnown RBP12.47□□□□□ -0.41
SRSF1-201ENST00000258962 X6R8D5 127 aa12.47□□□□□ -0.41
SRSF1-201ENST00000258962 TRGV1A0A0A0MS02 117 aa12.47□□□□□ -0.41
SRSF1-201ENST00000258962 OVOL2Q9BRP0 275 aa12.47□□□□□ -0.41
SRSF1-201ENST00000258962 EDA2RQ9HAV5 297 aa12.47□□□□□ -0.41
SRSF1-201ENST00000258962 NBEAL2Q6ZNJ1 2754 aa12.47□□□□□ -0.41
SRSF1-201ENST00000258962 TRBV6-5A0A0K0K1A5 114 aa12.46□□□□□ -0.42
SRSF1-201ENST00000258962 H7C1H1 209 aa12.46□□□□□ -0.42
SRSF1-201ENST00000258962 LGALS9BQ3B8N2 356 aa12.46□□□□□ -0.42
SRSF1-201ENST00000258962 Q6ZSN1 163 aa12.46□□□□□ -0.42
SRSF1-201ENST00000258962 PRO1933Q9H354 126 aa12.46□□□□□ -0.42
SRSF1-201ENST00000258962 ST20Q9HBF5 79 aa12.46□□□□□ -0.42
SRSF1-201ENST00000258962 STAB2Q8WWQ8 2551 aa12.46□□□□□ -0.42
SRSF1-201ENST00000258962 RHODO00212 210 aa12.45□□□□□ -0.42
SRSF1-201ENST00000258962 TCAPO15273 167 aa12.45□□□□□ -0.42
SRSF1-201ENST00000258962 DEFB135Q30KP9 77 aa12.45□□□□□ -0.42
SRSF1-201ENST00000258962 ATP5LO75964 103 aa12.44□□□□□ -0.42
SRSF1-201ENST00000258962 DDTP30046 118 aa12.44□□□□□ -0.42
SRSF1-201ENST00000258962 POLR2KP53803 58 aaKnown RBP12.44□□□□□ -0.42
SRSF1-201ENST00000258962 IFI27L1Q96BM0 104 aa12.44□□□□□ -0.42
SRSF1-201ENST00000258962 TP53TG1Q9Y2A0 90 aa12.44□□□□□ -0.42
SRSF1-201ENST00000258962 TRAV9-2A0A087WT02 112 aa12.43□□□□□ -0.42
SRSF1-201ENST00000258962 HSBP1L1C9JCN9 74 aa12.43□□□□□ -0.42
SRSF1-201ENST00000258962 VCYO14598 125 aa12.43□□□□□ -0.42
SRSF1-201ENST00000258962 ZFP2Q6ZN57 461 aa12.43□□□□□ -0.42
SRSF1-201ENST00000258962 NEGR1Q7Z3B1 354 aa12.43□□□□□ -0.42
SRSF1-201ENST00000258962 TENM3Q9P273 2699 aa12.43□□□□□ -0.42
SRSF1-201ENST00000258962 SMIM9A6NGZ8 99 aa12.42□□□□□ -0.42
SRSF1-201ENST00000258962 P0DMU3 169 aa12.42□□□□□ -0.42
SRSF1-201ENST00000258962 FAM231AP0DMU4 169 aa12.42□□□□□ -0.42
SRSF1-201ENST00000258962 FAM231CP0DMU5 169 aa12.42□□□□□ -0.42
SRSF1-201ENST00000258962 LINC01545Q5VT33 79 aa12.42□□□□□ -0.42
SRSF1-201ENST00000258962 TRAV4A0A0B4J268 109 aa12.42□□□□□ -0.42
SRSF1-201ENST00000258962 SDHAF1A6NFY7 115 aa12.42□□□□□ -0.42
SRSF1-201ENST00000258962 IGHV3-53P01767 116 aa12.42□□□□□ -0.42
SRSF1-201ENST00000258962 OR4C5Q8NGB2 326 aa12.42□□□□□ -0.42
SRSF1-201ENST00000258962 RNF183Q96D59 192 aa12.42□□□□□ -0.42
SRSF1-201ENST00000258962 ZNF479Q96JC4 524 aa12.42□□□□□ -0.42
SRSF1-201ENST00000258962 KIR2DL4Q99706 377 aa12.42□□□□□ -0.42
SRSF1-201ENST00000258962 PAM16Q9Y3D7 125 aa12.42□□□□□ -0.42
SRSF1-201ENST00000258962 GAGE12BA1L429 117 aa12.41□□□□□ -0.42
SRSF1-201ENST00000258962 GAGE7O76087 117 aa12.41□□□□□ -0.42
SRSF1-201ENST00000258962 NUDT3O95989 172 aa12.41□□□□□ -0.42
SRSF1-201ENST00000258962 GAGE12FP0CL80 117 aa12.41□□□□□ -0.42
SRSF1-201ENST00000258962 GAGE12GP0CL81 117 aa12.41□□□□□ -0.42
SRSF1-201ENST00000258962 GAGE12IP0CL82 117 aa12.41□□□□□ -0.42
SRSF1-201ENST00000258962 SPATA45Q537H7 98 aa12.41□□□□□ -0.42
SRSF1-201ENST00000258962 LGALS9CQ6DKI2 356 aa12.41□□□□□ -0.42
SRSF1-201ENST00000258962 Q9UF83 564 aa12.41□□□□□ -0.42
SRSF1-201ENST00000258962 TRBV27A0A0K0K1C4 114 aa12.4□□□□□ -0.42
SRSF1-201ENST00000258962 LINC00587B1AMM8 73 aa12.4□□□□□ -0.42
SRSF1-201ENST00000258962 EMP1P54849 157 aa12.4□□□□□ -0.42
SRSF1-201ENST00000258962 OR11H2Q8NH07 326 aa12.39□□□□□ -0.43
SRSF1-201ENST00000258962 MUC7Q8TAX7 377 aa12.39□□□□□ -0.43
SRSF1-201ENST00000258962 HUWE1Q7Z6Z7 4374 aaKnown RBP12.39□□□□□ -0.43
SRSF1-201ENST00000258962 LINC00612Q8N6U2 182 aa12.38□□□□□ -0.43
SRSF1-201ENST00000258962 NEXN-AS1Q8NBZ9 246 aa12.38□□□□□ -0.43
SRSF1-201ENST00000258962 MIEN1Q9BRT3 115 aa12.38□□□□□ -0.43
SRSF1-201ENST00000258962 H0Y8G0 127 aa12.37□□□□□ -0.43
SRSF1-201ENST00000258962 DEFB104AQ8WTQ1 72 aa12.37□□□□□ -0.43
SRSF1-201ENST00000258962 TRGV2A0A075B6R0 118 aa12.37□□□□□ -0.43
SRSF1-201ENST00000258962 C3orf84H3BNL1 204 aa12.37□□□□□ -0.43
SRSF1-201ENST00000258962 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.37□□□□□ -0.43
SRSF1-201ENST00000258962 PRSS1P07477 247 aa12.37□□□□□ -0.43
SRSF1-201ENST00000258962 IGHV4-28A0A0C4DH34 117 aa12.36□□□□□ -0.43
SRSF1-201ENST00000258962 CIDEAO60543 219 aa12.36□□□□□ -0.43
SRSF1-201ENST00000258962 ATOH7Q8N100 152 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms