RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 C12orf74Q32Q52 190 aa11.07□□□□□ -0.64
CAB39-201ENST00000258418 TMEM61Q8N0U2 210 aa11.07□□□□□ -0.64
CAB39-201ENST00000258418 ZFP2Q6ZN57 461 aa11.07□□□□□ -0.64
CAB39-201ENST00000258418 BAALCQ8WXS3 180 aa11.07□□□□□ -0.64
CAB39-201ENST00000258418 C11orf68Q9H3H3 251 aaKnown RBP11.06□□□□□ -0.64
CAB39-201ENST00000258418 TSSC4Q9Y5U2 329 aaPredicted RBP11.06□□□□□ -0.64
CAB39-201ENST00000258418 UBE2L6O14933 153 aa11.06□□□□□ -0.64
CAB39-201ENST00000258418 SAMD13Q5VXD3 122 aa11.05□□□□□ -0.64
CAB39-201ENST00000258418 NRACQ8N912 160 aa11.05□□□□□ -0.64
CAB39-201ENST00000258418 OR5A1Q8NGJ0 315 aa11.05□□□□□ -0.64
CAB39-201ENST00000258418 HRNRQ86YZ3 2850 aaPredicted RBP11.05□□□□□ -0.64
CAB39-201ENST00000258418 TMEM262E9PQX1 116 aa11.05□□□□□ -0.64
CAB39-201ENST00000258418 SRSF2Q01130 221 aaKnown RBP11.05□□□□□ -0.64
CAB39-201ENST00000258418 LENEPQ9Y5L5 61 aa11.05□□□□□ -0.64
CAB39-201ENST00000258418 U3KQK5 164 aa11.05□□□□□ -0.64
CAB39-201ENST00000258418 TEX15Q9BXT5 2789 aa11.04□□□□□ -0.64
CAB39-201ENST00000258418 GAGE12JA6NER3 117 aa11.04□□□□□ -0.64
CAB39-201ENST00000258418 PF4P02776 101 aa11.04□□□□□ -0.64
CAB39-201ENST00000258418 LGALS1P09382 135 aaKnown RBP11.04□□□□□ -0.64
CAB39-201ENST00000258418 RNASE3P12724 160 aaKnown RBP11.04□□□□□ -0.64
CAB39-201ENST00000258418 HTN3P15516 51 aa11.04□□□□□ -0.64
CAB39-201ENST00000258418 GAGE4Q13068 117 aa11.04□□□□□ -0.64
CAB39-201ENST00000258418 GAGE5Q13069 117 aa11.04□□□□□ -0.64
CAB39-201ENST00000258418 C20orf78Q9BR46 151 aa11.04□□□□□ -0.64
CAB39-201ENST00000258418 LINC01619G3V211 115 aa11.04□□□□□ -0.64
CAB39-201ENST00000258418 ZNRF2Q8NHG8 242 aa11.04□□□□□ -0.64
CAB39-201ENST00000258418 CUBNO60494 3623 aa11.04□□□□□ -0.64
CAB39-201ENST00000258418 C19orf54Q5BKX5 351 aa11.04□□□□□ -0.64
CAB39-201ENST00000258418 CELSR1Q9NYQ6 3014 aa11.04□□□□□ -0.64
CAB39-201ENST00000258418 GATA3P23771 443 aa11.03□□□□□ -0.64
CAB39-201ENST00000258418 LYRM7Q5U5X0 104 aa11.03□□□□□ -0.64
CAB39-201ENST00000258418 TRPT1Q86TN4 253 aaKnown RBP11.03□□□□□ -0.64
CAB39-201ENST00000258418 DEFB130BP0DP73 79 aa11.03□□□□□ -0.64
CAB39-201ENST00000258418 DEFB130AP0DP74 79 aa11.03□□□□□ -0.64
CAB39-201ENST00000258418 PAPPA-AS1Q5QFB9 102 aa11.03□□□□□ -0.64
CAB39-201ENST00000258418 PLEKHB2Q96CS7 222 aa11.03□□□□□ -0.64
CAB39-201ENST00000258418 MUC4Q99102 2169 aa11.02□□□□□ -0.64
CAB39-201ENST00000258418 A0A0J9YX75 114 aa11.02□□□□□ -0.64
CAB39-201ENST00000258418 ZNF415Q09FC8 603 aa11.02□□□□□ -0.65
CAB39-201ENST00000258418 J3QQQ9 107 aa11.02□□□□□ -0.65
CAB39-201ENST00000258418 SPINK8P0C7L1 97 aa11.02□□□□□ -0.65
CAB39-201ENST00000258418 DAND5Q8N907 189 aa11.01□□□□□ -0.65
CAB39-201ENST00000258418 A0A1B0GV72 72 aa11.01□□□□□ -0.65
CAB39-201ENST00000258418 DLX4Q92988 240 aaPredicted RBP11.01□□□□□ -0.65
CAB39-201ENST00000258418 H3BUA1 57 aa11.01□□□□□ -0.65
CAB39-201ENST00000258418 I3L3M4 83 aa11.01□□□□□ -0.65
CAB39-201ENST00000258418 GAGE7O76087 117 aa11.01□□□□□ -0.65
CAB39-201ENST00000258418 GAGE12FP0CL80 117 aa11.01□□□□□ -0.65
CAB39-201ENST00000258418 GAGE12GP0CL81 117 aa11.01□□□□□ -0.65
CAB39-201ENST00000258418 GAGE12IP0CL82 117 aa11.01□□□□□ -0.65
CAB39-201ENST00000258418 GPHB5Q86YW7 130 aa11.01□□□□□ -0.65
CAB39-201ENST00000258418 PTH2Q96A98 100 aa11.01□□□□□ -0.65
CAB39-201ENST00000258418 TRGV4A0A0C4DH28 118 aa11□□□□□ -0.65
CAB39-201ENST00000258418 IGLL5B9A064 214 aa11□□□□□ -0.65
CAB39-201ENST00000258418 ELANEP08246 267 aa11□□□□□ -0.65
CAB39-201ENST00000258418 WFDC11Q8NEX6 87 aa11□□□□□ -0.65
CAB39-201ENST00000258418 TIMM21Q9BVV7 248 aa11□□□□□ -0.65
CAB39-201ENST00000258418 USP24Q9UPU5 2620 aa11□□□□□ -0.65
CAB39-201ENST00000258418 A0A096LPF7 62 aa11□□□□□ -0.65
CAB39-201ENST00000258418 TRAV8-3A0A0A6YYJ7 113 aa11□□□□□ -0.65
CAB39-201ENST00000258418 U3KQE9 123 aa11□□□□□ -0.65
CAB39-201ENST00000258418 HELZ2Q9BYK8 2649 aaKnown RBP11□□□□□ -0.65
CAB39-201ENST00000258418 INSP01308 110 aa10.99□□□□□ -0.65
CAB39-201ENST00000258418 TOMM6Q96B49 74 aa10.99□□□□□ -0.65
CAB39-201ENST00000258418 SIGMAR1Q99720 223 aa10.99□□□□□ -0.65
CAB39-201ENST00000258418 HHLA3Q9XRX5 114 aa10.99□□□□□ -0.65
CAB39-201ENST00000258418 DEFB113Q30KQ7 82 aa10.98□□□□□ -0.65
CAB39-201ENST00000258418 ATP6V0BQ99437 205 aa10.98□□□□□ -0.65
CAB39-201ENST00000258418 CHCHD5Q9BSY4 110 aa10.98□□□□□ -0.65
CAB39-201ENST00000258418 ERG28Q9UKR5 140 aa10.98□□□□□ -0.65
CAB39-201ENST00000258418 C9JAW5 83 aa10.98□□□□□ -0.65
CAB39-201ENST00000258418 SIVA1O15304 175 aa10.98□□□□□ -0.65
CAB39-201ENST00000258418 FOXI2Q6ZQN5 318 aa10.98□□□□□ -0.65
CAB39-201ENST00000258418 A8MZ25 164 aa10.97□□□□□ -0.65
CAB39-201ENST00000258418 AZU1P20160 251 aa10.97□□□□□ -0.65
CAB39-201ENST00000258418 K7EQG2 157 aa10.96□□□□□ -0.65
CAB39-201ENST00000258418 PSMB8P28062 276 aa10.96□□□□□ -0.65
CAB39-201ENST00000258418 BBC3Q96PG8 261 aaPredicted RBP10.96□□□□□ -0.65
CAB39-201ENST00000258418 NOP10Q9NPE3 64 aaKnown RBP10.96□□□□□ -0.65
CAB39-201ENST00000258418 DCANP1Q8TF63 244 aa10.96□□□□□ -0.65
CAB39-201ENST00000258418 OR13C6PQ8NH95 151 aa10.96□□□□□ -0.66
CAB39-201ENST00000258418 COX6CP09669 75 aa10.95□□□□□ -0.66
CAB39-201ENST00000258418 CLUHP3Q96NS8 147 aa10.95□□□□□ -0.66
CAB39-201ENST00000258418 TMEM238C9JI98 176 aa10.95□□□□□ -0.66
CAB39-201ENST00000258418 SPAG8Q99932 426 aaPredicted RBP10.95□□□□□ -0.66
CAB39-201ENST00000258418 CNFNQ9BYD5 112 aa10.95□□□□□ -0.66
CAB39-201ENST00000258418 K7EMT4 169 aa10.95□□□□□ -0.66
CAB39-201ENST00000258418 CIRBPQ14011 172 aaKnown RBP10.95□□□□□ -0.66
CAB39-201ENST00000258418 ESM1Q9NQ30 184 aa10.95□□□□□ -0.66
CAB39-201ENST00000258418 NDUFA12Q9UI09 145 aa10.95□□□□□ -0.66
CAB39-201ENST00000258418 RNASE1P07998 156 aaKnown RBP10.94□□□□□ -0.66
CAB39-201ENST00000258418 IGHV4-31P0DP07 118 aa10.94□□□□□ -0.66
CAB39-201ENST00000258418 RPL36AP83881 106 aaKnown RBP10.94□□□□□ -0.66
CAB39-201ENST00000258418 RPL36ALQ969Q0 106 aaKnown RBP10.94□□□□□ -0.66
CAB39-201ENST00000258418 WFDC10AQ9H1F0 79 aa10.94□□□□□ -0.66
CAB39-201ENST00000258418 CCL24O00175 119 aa10.94□□□□□ -0.66
CAB39-201ENST00000258418 A4D1N5 150 aa10.94□□□□□ -0.66
CAB39-201ENST00000258418 CLPSL2Q6UWE3 100 aa10.94□□□□□ -0.66
CAB39-201ENST00000258418 NEXN-AS1Q8NBZ9 246 aa10.94□□□□□ -0.66
CAB39-201ENST00000258418 INSL3P51460 131 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms