RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 VPS13CQ709C8 3753 aa9.37□□□□□ -0.91
USP30-201ENST00000257548 DNAL4O96015 105 aa9.36□□□□□ -0.91
USP30-201ENST00000257548 TMEM101Q96IK0 257 aa9.36□□□□□ -0.91
USP30-201ENST00000257548 ZNF580Q9UK33 172 aa9.36□□□□□ -0.91
USP30-201ENST00000257548 HIVEP2P31629 2446 aa9.36□□□□□ -0.91
USP30-201ENST00000257548 TRAV13-1A0A0B4J241 112 aa9.36□□□□□ -0.91
USP30-201ENST00000257548 UBE2E1P51965 193 aa9.35□□□□□ -0.91
USP30-201ENST00000257548 TSPEAR-AS2P59090 65 aa9.35□□□□□ -0.91
USP30-201ENST00000257548 FAM110DQ8TAY7 271 aaPredicted RBP9.35□□□□□ -0.91
USP30-201ENST00000257548 PIFOQ8TCI5 191 aa9.35□□□□□ -0.91
USP30-201ENST00000257548 ZFHX3Q15911 3703 aa9.35□□□□□ -0.91
USP30-201ENST00000257548 NPFFO15130 113 aa9.35□□□□□ -0.91
USP30-201ENST00000257548 HOXD3P31249 432 aaPredicted RBP9.35□□□□□ -0.91
USP30-201ENST00000257548 SLC25A29Q8N8R3 303 aa9.35□□□□□ -0.91
USP30-201ENST00000257548 RAI1Q7Z5J4 1906 aaPredicted RBP9.35□□□□□ -0.91
USP30-201ENST00000257548 TRGV11A0A075B6L2 103 aa9.35□□□□□ -0.91
USP30-201ENST00000257548 IGHG4P01861 327 aa9.35□□□□□ -0.91
USP30-201ENST00000257548 IGLV2-18A0A075B6J9 118 aa9.34□□□□□ -0.91
USP30-201ENST00000257548 SNRPD3P62318 126 aaKnown RBP9.34□□□□□ -0.91
USP30-201ENST00000257548 IGHV3-33P01772 117 aa9.34□□□□□ -0.91
USP30-201ENST00000257548 Q8N9W7 124 aa9.34□□□□□ -0.91
USP30-201ENST00000257548 TRBV7-1A0A0A6YYK4 115 aa9.34□□□□□ -0.91
USP30-201ENST00000257548 IGHV3-30P01768 117 aa9.34□□□□□ -0.91
USP30-201ENST00000257548 IGHV3-30-5P0DP03 117 aa9.34□□□□□ -0.91
USP30-201ENST00000257548 UBE2D1P51668 147 aa9.34□□□□□ -0.91
USP30-201ENST00000257548 C20orf173Q96LM9 149 aa9.34□□□□□ -0.91
USP30-201ENST00000257548 MSRB2Q9Y3D2 182 aa9.34□□□□□ -0.91
USP30-201ENST00000257548 HIVEP3Q5T1R4 2406 aa9.34□□□□□ -0.91
USP30-201ENST00000257548 PRRC2AP48634 2157 aaKnown RBP9.34□□□□□ -0.91
USP30-201ENST00000257548 CSMD2Q7Z408 3487 aa9.34□□□□□ -0.91
USP30-201ENST00000257548 TMEM141Q96I45 108 aa9.33□□□□□ -0.92
USP30-201ENST00000257548 F8W735 103 aaPredicted RBP9.33□□□□□ -0.92
USP30-201ENST00000257548 TRIAP1O43715 76 aa9.33□□□□□ -0.92
USP30-201ENST00000257548 LY6G5BQ8NDX9 201 aa9.33□□□□□ -0.92
USP30-201ENST00000257548 ZNRF2Q8NHG8 242 aa9.33□□□□□ -0.92
USP30-201ENST00000257548 CCDC140Q96MF4 163 aa9.33□□□□□ -0.92
USP30-201ENST00000257548 MDFICQ9P1T7 246 aa9.33□□□□□ -0.92
USP30-201ENST00000257548 NAV2Q8IVL1 2488 aa9.33□□□□□ -0.92
USP30-201ENST00000257548 P0DMU3 169 aa9.33□□□□□ -0.92
USP30-201ENST00000257548 FAM231AP0DMU4 169 aa9.33□□□□□ -0.92
USP30-201ENST00000257548 FAM231CP0DMU5 169 aa9.33□□□□□ -0.92
USP30-201ENST00000257548 TMEM190Q8WZ59 177 aa9.33□□□□□ -0.92
USP30-201ENST00000257548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.32□□□□□ -0.92
USP30-201ENST00000257548 IGKV2-29A2NJV5 120 aaPredicted RBP9.32□□□□□ -0.92
USP30-201ENST00000257548 ICOSQ9Y6W8 199 aa9.32□□□□□ -0.92
USP30-201ENST00000257548 HIST1H4AP62805 103 aaKnown RBP9.32□□□□□ -0.92
USP30-201ENST00000257548 NPBQ8NG41 125 aa9.32□□□□□ -0.92
USP30-201ENST00000257548 BPESC1Q9GZL8 116 aa9.32□□□□□ -0.92
USP30-201ENST00000257548 UTP20O75691 2785 aaKnown RBP9.32□□□□□ -0.92
USP30-201ENST00000257548 HRNRQ86YZ3 2850 aaPredicted RBP9.32□□□□□ -0.92
USP30-201ENST00000257548 CFAP161Q6P656 301 aa9.32□□□□□ -0.92
USP30-201ENST00000257548 CNFNQ9BYD5 112 aa9.32□□□□□ -0.92
USP30-201ENST00000257548 RHODO00212 210 aa9.31□□□□□ -0.92
USP30-201ENST00000257548 IGHV3-53P01767 116 aa9.31□□□□□ -0.92
USP30-201ENST00000257548 C9orf47Q6ZRZ4 202 aa9.31□□□□□ -0.92
USP30-201ENST00000257548 UBE2D3P61077 147 aa9.31□□□□□ -0.92
USP30-201ENST00000257548 UBE2D2P62837 147 aa9.31□□□□□ -0.92
USP30-201ENST00000257548 IGFL2Q6UWQ7 119 aa9.31□□□□□ -0.92
USP30-201ENST00000257548 PRIMA1Q86XR5 153 aa9.31□□□□□ -0.92
USP30-201ENST00000257548 TRBV10-2A0A0K0K1G8 114 aa9.31□□□□□ -0.92
USP30-201ENST00000257548 H3BUX3 64 aa9.31□□□□□ -0.92
USP30-201ENST00000257548 M0R1W7 72 aa9.31□□□□□ -0.92
USP30-201ENST00000257548 PIP4P1Q86T03 277 aa9.31□□□□□ -0.92
USP30-201ENST00000257548 IGHV3-30-3P0DP02 117 aa9.3□□□□□ -0.92
USP30-201ENST00000257548 C19orf54Q5BKX5 351 aa9.3□□□□□ -0.92
USP30-201ENST00000257548 MINOS1Q5TGZ0 78 aa9.3□□□□□ -0.92
USP30-201ENST00000257548 C11orf68Q9H3H3 251 aaKnown RBP9.3□□□□□ -0.92
USP30-201ENST00000257548 ZFP36P26651 326 aaKnown RBP9.3□□□□□ -0.92
USP30-201ENST00000257548 FLNCQ14315 2725 aa9.3□□□□□ -0.92
USP30-201ENST00000257548 ELANEP08246 267 aa9.29□□□□□ -0.92
USP30-201ENST00000257548 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
USP30-201ENST00000257548 ZFAND2AQ8N6M9 145 aa9.29□□□□□ -0.92
USP30-201ENST00000257548 ZFAND3Q9H8U3 227 aa9.29□□□□□ -0.92
USP30-201ENST00000257548 CLPSL1A2RUU4 121 aa9.29□□□□□ -0.92
USP30-201ENST00000257548 I3L3M4 83 aa9.29□□□□□ -0.92
USP30-201ENST00000257548 LEPROTO15243 131 aa9.29□□□□□ -0.92
USP30-201ENST00000257548 MINOS1-NBL1R4GNA1 71 aa9.29□□□□□ -0.92
USP30-201ENST00000257548 CELSR2Q9HCU4 2923 aa9.28□□□□□ -0.92
USP30-201ENST00000257548 IGHV1-69DA0A0B4J2H0 117 aa9.28□□□□□ -0.92
USP30-201ENST00000257548 A0A0J9YXY3 114 aa9.28□□□□□ -0.92
USP30-201ENST00000257548 LINC01587Q99440 93 aa9.28□□□□□ -0.92
USP30-201ENST00000257548 PRM2P04554 102 aa9.28□□□□□ -0.92
USP30-201ENST00000257548 ITLN2Q8WWU7 325 aaPredicted RBP9.28□□□□□ -0.92
USP30-201ENST00000257548 BLCAPP62952 87 aa9.28□□□□□ -0.92
USP30-201ENST00000257548 DAZ1Q9NQZ3 744 aaKnown RBP9.28□□□□□ -0.92
USP30-201ENST00000257548 ABCA12Q86UK0 2595 aa9.28□□□□□ -0.92
USP30-201ENST00000257548 IGKV3D-7A0A0C4DH55 119 aa9.27□□□□□ -0.93
USP30-201ENST00000257548 MTORP42345 2549 aa9.27□□□□□ -0.93
USP30-201ENST00000257548 LY6LH3BQJ8 138 aa9.27□□□□□ -0.93
USP30-201ENST00000257548 LGALS9O00182 355 aa9.27□□□□□ -0.93
USP30-201ENST00000257548 YAE1D1Q9NRH1 226 aa9.27□□□□□ -0.93
USP30-201ENST00000257548 CRYGDP07320 174 aa9.27□□□□□ -0.93
USP30-201ENST00000257548 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
USP30-201ENST00000257548 Q9H8V8 135 aa9.27□□□□□ -0.93
USP30-201ENST00000257548 Q9HAA7 133 aa9.27□□□□□ -0.93
USP30-201ENST00000257548 MOB4Q9Y3A3 225 aa9.27□□□□□ -0.93
USP30-201ENST00000257548 TINCRA0A1B0GVN0 87 aa9.26□□□□□ -0.93
USP30-201ENST00000257548 IGLV4-69A0A075B6H9 119 aa9.26□□□□□ -0.93
USP30-201ENST00000257548 PROK1P58294 105 aa9.26□□□□□ -0.93
USP30-201ENST00000257548 OOSP1A8MZH6 123 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms