RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 TRBV6-5A0A0K0K1A5 114 aa12.15□□□□□ -0.46
UBQLN1-201ENST00000257468 H3BMM0 161 aa12.15□□□□□ -0.46
UBQLN1-201ENST00000257468 CHD6Q8TD26 2715 aa12.15□□□□□ -0.47
UBQLN1-201ENST00000257468 E9PLD3 99 aa12.14□□□□□ -0.47
UBQLN1-201ENST00000257468 PROK1P58294 105 aa12.14□□□□□ -0.47
UBQLN1-201ENST00000257468 C11orf44Q8N8P7 122 aa12.14□□□□□ -0.47
UBQLN1-201ENST00000257468 C4orf3Q8WVX3 66 aa12.14□□□□□ -0.47
UBQLN1-201ENST00000257468 TRGV11A0A075B6L2 103 aa12.14□□□□□ -0.47
UBQLN1-201ENST00000257468 RIPPLY3P57055 190 aa12.14□□□□□ -0.47
UBQLN1-201ENST00000257468 SAMD5Q5TGI4 173 aa12.14□□□□□ -0.47
UBQLN1-201ENST00000257468 GTF2H5Q6ZYL4 71 aa12.14□□□□□ -0.47
UBQLN1-201ENST00000257468 P0DMU3 169 aa12.13□□□□□ -0.47
UBQLN1-201ENST00000257468 FAM231AP0DMU4 169 aa12.13□□□□□ -0.47
UBQLN1-201ENST00000257468 FAM231CP0DMU5 169 aa12.13□□□□□ -0.47
UBQLN1-201ENST00000257468 PMVKQ15126 192 aa12.13□□□□□ -0.47
UBQLN1-201ENST00000257468 SPCS1Q9Y6A9 102 aa12.13□□□□□ -0.47
UBQLN1-201ENST00000257468 TRBV7-3A0A075B6L6 115 aa12.13□□□□□ -0.47
UBQLN1-201ENST00000257468 TRPT1Q86TN4 253 aaKnown RBP12.13□□□□□ -0.47
UBQLN1-201ENST00000257468 PLEKHB2Q96CS7 222 aa12.13□□□□□ -0.47
UBQLN1-201ENST00000257468 KMT2BQ9UMN6 2715 aaPredicted RBP12.12□□□□□ -0.47
UBQLN1-201ENST00000257468 RNF151Q2KHN1 245 aa12.12□□□□□ -0.47
UBQLN1-201ENST00000257468 Q6ZSV7 163 aa12.12□□□□□ -0.47
UBQLN1-201ENST00000257468 PEMTQ9UBM1 199 aa12.12□□□□□ -0.47
UBQLN1-201ENST00000257468 ZNF815PA8K554 130 aa12.12□□□□□ -0.47
UBQLN1-201ENST00000257468 DYNLRB2Q8TF09 96 aa12.12□□□□□ -0.47
UBQLN1-201ENST00000257468 TIMM17AQ99595 171 aa12.12□□□□□ -0.47
UBQLN1-201ENST00000257468 MAP6D1Q9H9H5 199 aa12.12□□□□□ -0.47
UBQLN1-201ENST00000257468 OCIAD2Q56VL3 154 aa12.11□□□□□ -0.47
UBQLN1-201ENST00000257468 ZNRF2Q8NHG8 242 aa12.11□□□□□ -0.47
UBQLN1-201ENST00000257468 TMEM141Q96I45 108 aa12.11□□□□□ -0.47
UBQLN1-201ENST00000257468 FLNAP21333 2647 aaKnown RBP12.11□□□□□ -0.47
UBQLN1-201ENST00000257468 A0A1W2PRX2 142 aa12.11□□□□□ -0.47
UBQLN1-201ENST00000257468 FABP2P12104 132 aa12.11□□□□□ -0.47
UBQLN1-201ENST00000257468 Q9UF83 564 aa12.11□□□□□ -0.47
UBQLN1-201ENST00000257468 DNAJC9-AS1A6NH13 148 aa12.1□□□□□ -0.47
UBQLN1-201ENST00000257468 TAL2Q16559 108 aa12.1□□□□□ -0.47
UBQLN1-201ENST00000257468 CCDC168Q8NDH2 2452 aa12.1□□□□□ -0.47
UBQLN1-201ENST00000257468 A8MTW9 85 aa12.09□□□□□ -0.47
UBQLN1-201ENST00000257468 SCGB2A2Q13296 93 aa12.09□□□□□ -0.47
UBQLN1-201ENST00000257468 DEFB114Q30KQ6 69 aa12.09□□□□□ -0.47
UBQLN1-201ENST00000257468 C12orf74Q32Q52 190 aa12.09□□□□□ -0.47
UBQLN1-201ENST00000257468 NSUN5P1Q3KNT7 163 aa12.09□□□□□ -0.47
UBQLN1-201ENST00000257468 TMEM170BQ5T4T1 132 aa12.09□□□□□ -0.47
UBQLN1-201ENST00000257468 PLA2G2AP14555 144 aa12.09□□□□□ -0.47
UBQLN1-201ENST00000257468 TSPEAR-AS2P59090 65 aa12.09□□□□□ -0.47
UBQLN1-201ENST00000257468 SCGB1D4Q6XE38 83 aa12.08□□□□□ -0.48
UBQLN1-201ENST00000257468 ESM1Q9NQ30 184 aa12.08□□□□□ -0.48
UBQLN1-201ENST00000257468 NACAE9PAV3 2078 aa12.08□□□□□ -0.48
UBQLN1-201ENST00000257468 I3L3M4 83 aa12.08□□□□□ -0.48
UBQLN1-201ENST00000257468 SAP30O75446 220 aa12.08□□□□□ -0.48
UBQLN1-201ENST00000257468 SPAG8Q99932 426 aaPredicted RBP12.08□□□□□ -0.48
UBQLN1-201ENST00000257468 IGLL5B9A064 214 aa12.07□□□□□ -0.48
UBQLN1-201ENST00000257468 RHOHQ15669 191 aa12.07□□□□□ -0.48
UBQLN1-201ENST00000257468 Q6ZSN1 163 aa12.07□□□□□ -0.48
UBQLN1-201ENST00000257468 RAX2Q96IS3 184 aa12.07□□□□□ -0.48
UBQLN1-201ENST00000257468 WNK1Q9H4A3 2382 aa12.07□□□□□ -0.48
UBQLN1-201ENST00000257468 LINC01549A6NIU2 74 aa12.07□□□□□ -0.48
UBQLN1-201ENST00000257468 C20orf203Q8NBC4 194 aa12.07□□□□□ -0.48
UBQLN1-201ENST00000257468 J3QKU1 62 aa12.06□□□□□ -0.48
UBQLN1-201ENST00000257468 NIPBLQ6KC79 2804 aaeCLIP12.06□□□□□ -0.48
UBQLN1-201ENST00000257468 TRAV2A0A0B4J234 112 aa12.06□□□□□ -0.48
UBQLN1-201ENST00000257468 LINC01587Q99440 93 aa12.06□□□□□ -0.48
UBQLN1-201ENST00000257468 PAPPA-AS1Q5QFB9 102 aa12.05□□□□□ -0.48
UBQLN1-201ENST00000257468 OR5A1Q8NGJ0 315 aa12.05□□□□□ -0.48
UBQLN1-201ENST00000257468 M0R2P5 195 aa12.04□□□□□ -0.48
UBQLN1-201ENST00000257468 CD28P10747 220 aa12.04□□□□□ -0.48
UBQLN1-201ENST00000257468 HERVK_113P61574 105 aa12.04□□□□□ -0.48
UBQLN1-201ENST00000257468 ZNF479Q96JC4 524 aa12.04□□□□□ -0.48
UBQLN1-201ENST00000257468 MRPL16Q9NX20 251 aaKnown RBP12.04□□□□□ -0.48
UBQLN1-201ENST00000257468 ZNF415Q09FC8 603 aa12.04□□□□□ -0.48
UBQLN1-201ENST00000257468 ODF3L2Q3SX64 289 aa12.04□□□□□ -0.48
UBQLN1-201ENST00000257468 CEMP1Q6PRD7 247 aaPredicted RBP12.04□□□□□ -0.48
UBQLN1-201ENST00000257468 PDZD2O15018 2839 aa12.04□□□□□ -0.48
UBQLN1-201ENST00000257468 IGLV4-3A0A075B6K6 122 aa12.03□□□□□ -0.48
UBQLN1-201ENST00000257468 IGHV3-64A0A075B6Q5 118 aa12.03□□□□□ -0.48
UBQLN1-201ENST00000257468 C11orf72Q8NBR9 251 aa12.03□□□□□ -0.48
UBQLN1-201ENST00000257468 XCL2Q9UBD3 114 aa12.03□□□□□ -0.48
UBQLN1-201ENST00000257468 SRSF9Q13242 221 aaKnown RBP eCLIP12.03□□□□□ -0.48
UBQLN1-201ENST00000257468 CFAP126Q5VTH2 177 aa12.03□□□□□ -0.48
UBQLN1-201ENST00000257468 TMEM86BQ8N661 226 aa12.03□□□□□ -0.48
UBQLN1-201ENST00000257468 SETD2Q9BYW2 2564 aaPredicted RBP12.02□□□□□ -0.48
UBQLN1-201ENST00000257468 RNASE13Q5GAN3 156 aaKnown RBP12.02□□□□□ -0.49
UBQLN1-201ENST00000257468 IGHV3OR16-12A0A075B7B8 117 aa12.02□□□□□ -0.49
UBQLN1-201ENST00000257468 A0A0J9YXV3 536 aa12.02□□□□□ -0.49
UBQLN1-201ENST00000257468 A0A0J9YY99 117 aa12.02□□□□□ -0.49
UBQLN1-201ENST00000257468 AZU1P20160 251 aa12.02□□□□□ -0.49
UBQLN1-201ENST00000257468 C21orf62-AS1Q17RA5 79 aa12.02□□□□□ -0.49
UBQLN1-201ENST00000257468 A0A1B0GWB2 263 aa12.01□□□□□ -0.49
UBQLN1-201ENST00000257468 A8MWV9 139 aa12.01□□□□□ -0.49
UBQLN1-201ENST00000257468 INSP01308 110 aa12.01□□□□□ -0.49
UBQLN1-201ENST00000257468 NFE4Q86UQ8 179 aa12.01□□□□□ -0.49
UBQLN1-201ENST00000257468 FAM104AQ969W3 186 aa12.01□□□□□ -0.49
UBQLN1-201ENST00000257468 TNFRSF18Q9Y5U5 241 aa12.01□□□□□ -0.49
UBQLN1-201ENST00000257468 ACANP16112 2415 aa12.01□□□□□ -0.49
UBQLN1-201ENST00000257468 AMELXQ99217 191 aa12□□□□□ -0.49
UBQLN1-201ENST00000257468 J3QQQ9 107 aa12□□□□□ -0.49
UBQLN1-201ENST00000257468 CCL24O00175 119 aa12□□□□□ -0.49
UBQLN1-201ENST00000257468 RRN3P1Q2M238 152 aa12□□□□□ -0.49
UBQLN1-201ENST00000257468 CITED2Q99967 270 aaPredicted RBP12□□□□□ -0.49
UBQLN1-201ENST00000257468 VPS25Q9BRG1 176 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 349.8 ms