RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 SHANK1Q9Y566 2161 aa12.87□□□□□ -0.35
SORT1-201ENST00000256637 DSCAML1Q8TD84 2053 aa12.86□□□□□ -0.35
SORT1-201ENST00000256637 TET2Q6N021 2002 aaPredicted RBP12.86□□□□□ -0.35
SORT1-201ENST00000256637 ADAMTS20P59510 1910 aa12.86□□□□□ -0.35
SORT1-201ENST00000256637 IGKV1D-37A0A075B6S9 117 aa12.86□□□□□ -0.35
SORT1-201ENST00000256637 FAM19A1Q7Z5A9 133 aa12.86□□□□□ -0.35
SORT1-201ENST00000256637 ARHGAP32A7KAX9 2087 aa12.86□□□□□ -0.35
SORT1-201ENST00000256637 ZNF493Q6ZR52 646 aa12.85□□□□□ -0.35
SORT1-201ENST00000256637 PRO0255Q9UI72 69 aa12.85□□□□□ -0.35
SORT1-201ENST00000256637 RBAKDNA6NC62 111 aa12.85□□□□□ -0.35
SORT1-201ENST00000256637 IGLV2-8P01709 118 aa12.85□□□□□ -0.35
SORT1-201ENST00000256637 LINC01006Q8NI28 216 aa12.85□□□□□ -0.35
SORT1-201ENST00000256637 LINC00526Q96FQ7 95 aa12.85□□□□□ -0.35
SORT1-201ENST00000256637 FUSP35637 526 aaKnown RBP eCLIP12.84□□□□□ -0.35
SORT1-201ENST00000256637 UTRNP46939 3433 aa12.84□□□□□ -0.35
SORT1-201ENST00000256637 PPDPFQ9H3Y8 114 aa12.84□□□□□ -0.35
SORT1-201ENST00000256637 DEFB114Q30KQ6 69 aa12.84□□□□□ -0.35
SORT1-201ENST00000256637 GDF5OSQ5U4N7 250 aa12.84□□□□□ -0.35
SORT1-201ENST00000256637 IGLV3-1P01715 115 aa12.84□□□□□ -0.35
SORT1-201ENST00000256637 C9JQL5 133 aa12.84□□□□□ -0.35
SORT1-201ENST00000256637 FBXL19-AS1Q494R0 122 aa12.84□□□□□ -0.35
SORT1-201ENST00000256637 CCDC140Q96MF4 163 aa12.84□□□□□ -0.35
SORT1-201ENST00000256637 WNK1Q9H4A3 2382 aa12.84□□□□□ -0.35
SORT1-201ENST00000256637 LINC01559Q495D7 138 aa12.83□□□□□ -0.36
SORT1-201ENST00000256637 C9orf85Q96MD7 179 aa12.83□□□□□ -0.36
SORT1-201ENST00000256637 ORMDL1Q9P0S3 153 aa12.83□□□□□ -0.36
SORT1-201ENST00000256637 CARD19Q96LW7 228 aa12.83□□□□□ -0.36
SORT1-201ENST00000256637 SPTAN1Q13813 2472 aaKnown RBP12.83□□□□□ -0.36
SORT1-201ENST00000256637 Q0VG73 95 aa12.82□□□□□ -0.36
SORT1-201ENST00000256637 CLUHP3Q96NS8 147 aa12.82□□□□□ -0.36
SORT1-201ENST00000256637 WI2-2373I1.2A0A1W2PRP0 233 aa12.82□□□□□ -0.36
SORT1-201ENST00000256637 REG3AQ06141 175 aa12.82□□□□□ -0.36
SORT1-201ENST00000256637 SPINK6Q6UWN8 80 aa12.82□□□□□ -0.36
SORT1-201ENST00000256637 RNF152Q8N8N0 203 aa12.82□□□□□ -0.36
SORT1-201ENST00000256637 SND1-IT1Q9HBX3 110 aa12.82□□□□□ -0.36
SORT1-201ENST00000256637 ZFP2Q6ZN57 461 aa12.81□□□□□ -0.36
SORT1-201ENST00000256637 C20orf173Q96LM9 149 aa12.81□□□□□ -0.36
SORT1-201ENST00000256637 IGLV2-11P01706 119 aa12.81□□□□□ -0.36
SORT1-201ENST00000256637 PCP2Q8IVA1 136 aa12.81□□□□□ -0.36
SORT1-201ENST00000256637 PRRC2AP48634 2157 aaKnown RBP12.81□□□□□ -0.36
SORT1-201ENST00000256637 ZNF702PQ9H963 129 aa12.81□□□□□ -0.36
SORT1-201ENST00000256637 PROK1P58294 105 aa12.8□□□□□ -0.36
SORT1-201ENST00000256637 C14orf177Q52M58 125 aa12.8□□□□□ -0.36
SORT1-201ENST00000256637 BBC3Q96PG8 261 aaPredicted RBP12.8□□□□□ -0.36
SORT1-201ENST00000256637 A0A0J9YXV3 536 aa12.8□□□□□ -0.36
SORT1-201ENST00000256637 KRTAP27-1Q3LI81 207 aa12.8□□□□□ -0.36
SORT1-201ENST00000256637 CEND1Q8N111 149 aa12.8□□□□□ -0.36
SORT1-201ENST00000256637 TRAV10A0A0B4J240 114 aa12.79□□□□□ -0.36
SORT1-201ENST00000256637 C20orf78Q9BR46 151 aa12.79□□□□□ -0.36
SORT1-201ENST00000256637 PATE2Q6UY27 113 aa12.79□□□□□ -0.36
SORT1-201ENST00000256637 SIVA1O15304 175 aa12.78□□□□□ -0.36
SORT1-201ENST00000256637 TRBV24-1A0A075B6N3 115 aa12.78□□□□□ -0.36
SORT1-201ENST00000256637 LOC100131303A0A0U1RQF7 123 aa12.78□□□□□ -0.36
SORT1-201ENST00000256637 COLCA2A8K830 154 aa12.78□□□□□ -0.36
SORT1-201ENST00000256637 FAM208BQ5VWN6 2430 aa12.78□□□□□ -0.36
SORT1-201ENST00000256637 K7EMT4 169 aa12.78□□□□□ -0.36
SORT1-201ENST00000256637 DCANP1Q8TF63 244 aa12.78□□□□□ -0.36
SORT1-201ENST00000256637 IGLV1-47P01700 117 aa12.77□□□□□ -0.36
SORT1-201ENST00000256637 A0A0J9YX75 114 aa12.77□□□□□ -0.36
SORT1-201ENST00000256637 F8VRH5 84 aa12.77□□□□□ -0.36
SORT1-201ENST00000256637 BAALC-AS2P0C853 105 aa12.77□□□□□ -0.37
SORT1-201ENST00000256637 C11orf71Q6IPW1 123 aa12.77□□□□□ -0.37
SORT1-201ENST00000256637 ATG2AQ2TAZ0 1938 aa12.76□□□□□ -0.37
SORT1-201ENST00000256637 ADCYAP1P18509 176 aa12.76□□□□□ -0.37
SORT1-201ENST00000256637 CRYBA4P53673 196 aa12.76□□□□□ -0.37
SORT1-201ENST00000256637 TRBV6-1A0A0K0K1D8 114 aa12.76□□□□□ -0.37
SORT1-201ENST00000256637 SPANXA1Q9NS26 97 aa12.76□□□□□ -0.37
SORT1-201ENST00000256637 NUPR2A6NF83 97 aa12.76□□□□□ -0.37
SORT1-201ENST00000256637 Q6ZUT4 128 aa12.76□□□□□ -0.37
SORT1-201ENST00000256637 IGLV9-49A0A0B4J1Y8 123 aa12.75□□□□□ -0.37
SORT1-201ENST00000256637 KPRPQ5T749 579 aaPredicted RBP12.75□□□□□ -0.37
SORT1-201ENST00000256637 IGHV4-30-4P0DP06 118 aa12.75□□□□□ -0.37
SORT1-201ENST00000256637 EDN2P20800 178 aa12.75□□□□□ -0.37
SORT1-201ENST00000256637 FAM231BA6NCW3 169 aa12.74□□□□□ -0.37
SORT1-201ENST00000256637 RPL37AP8A6NKH3 93 aa12.74□□□□□ -0.37
SORT1-201ENST00000256637 ACYP1P07311 99 aa12.74□□□□□ -0.37
SORT1-201ENST00000256637 IGKV2-28A0A075B6P5 120 aa12.73□□□□□ -0.37
SORT1-201ENST00000256637 IGKV2D-28P01615 120 aa12.73□□□□□ -0.37
SORT1-201ENST00000256637 PRO1854Q9UHT4 67 aa12.73□□□□□ -0.37
SORT1-201ENST00000256637 FAM236DA0A1B0GTK5 79 aa12.73□□□□□ -0.37
SORT1-201ENST00000256637 ODF3BA8MYP8 253 aa12.73□□□□□ -0.37
SORT1-201ENST00000256637 FAM236CP0DP71 79 aa12.73□□□□□ -0.37
SORT1-201ENST00000256637 CHCHD10Q8WYQ3 142 aaPredicted RBP12.73□□□□□ -0.37
SORT1-201ENST00000256637 CT83Q5H943 113 aa12.73□□□□□ -0.37
SORT1-201ENST00000256637 C11orf52Q96A22 123 aa12.73□□□□□ -0.37
SORT1-201ENST00000256637 MUSTN1Q8IVN3 82 aa12.72□□□□□ -0.37
SORT1-201ENST00000256637 G3V4G9 280 aa12.72□□□□□ -0.37
SORT1-201ENST00000256637 POU2AF1Q16633 256 aa12.72□□□□□ -0.37
SORT1-201ENST00000256637 PCP4P48539 62 aa12.72□□□□□ -0.37
SORT1-201ENST00000256637 HERV-K104P63124 156 aa12.72□□□□□ -0.37
SORT1-201ENST00000256637 MIR7-3HGQ8N6C7 128 aa12.71□□□□□ -0.37
SORT1-201ENST00000256637 HIVEP2P31629 2446 aa12.71□□□□□ -0.37
SORT1-201ENST00000256637 CFPP27918 469 aa12.71□□□□□ -0.38
SORT1-201ENST00000256637 DIRC1Q969H9 104 aa12.71□□□□□ -0.38
SORT1-201ENST00000256637 AVPP01185 164 aa12.7□□□□□ -0.38
SORT1-201ENST00000256637 IGLV2-14P01704 120 aa12.7□□□□□ -0.38
SORT1-201ENST00000256637 C1orf229Q6ZS94 237 aaPredicted RBP12.7□□□□□ -0.38
SORT1-201ENST00000256637 XAGE1AQ9HD64 81 aa12.7□□□□□ -0.38
SORT1-201ENST00000256637 LYRM9A8MSI8 78 aa12.7□□□□□ -0.38
SORT1-201ENST00000256637 RBM3P98179 157 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms