RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 TRBV25-1A0A075B6N4 114 aa15.86■□□□□ 0.13
CLN6-201ENST00000249806 IGIPA6NJ69 53 aa15.86■□□□□ 0.13
CLN6-201ENST00000249806 UBE2V1Q13404 147 aa15.85■□□□□ 0.13
CLN6-201ENST00000249806 PROK1P58294 105 aa15.84■□□□□ 0.13
CLN6-201ENST00000249806 VAMP3Q15836 100 aa15.84■□□□□ 0.13
CLN6-201ENST00000249806 ODF3L2Q3SX64 289 aa15.84■□□□□ 0.13
CLN6-201ENST00000249806 TRPT1Q86TN4 253 aaKnown RBP15.84■□□□□ 0.13
CLN6-201ENST00000249806 GCN1Q92616 2671 aaKnown RBP15.84■□□□□ 0.13
CLN6-201ENST00000249806 LINC01587Q99440 93 aa15.84■□□□□ 0.13
CLN6-201ENST00000249806 RNASE1P07998 156 aaKnown RBP15.83■□□□□ 0.13
CLN6-201ENST00000249806 NACAE9PAV3 2078 aa15.83■□□□□ 0.12
CLN6-201ENST00000249806 CHAC1Q9BUX1 264 aa15.82■□□□□ 0.12
CLN6-201ENST00000249806 HIGD1BQ9P298 99 aa15.82■□□□□ 0.12
CLN6-201ENST00000249806 P0DMU3 169 aa15.82■□□□□ 0.12
CLN6-201ENST00000249806 FAM231AP0DMU4 169 aa15.82■□□□□ 0.12
CLN6-201ENST00000249806 FAM231CP0DMU5 169 aa15.82■□□□□ 0.12
CLN6-201ENST00000249806 RIPPLY3P57055 190 aa15.82■□□□□ 0.12
CLN6-201ENST00000249806 SMR3AQ99954 134 aa15.82■□□□□ 0.12
CLN6-201ENST00000249806 K7EP13 123 aa15.81■□□□□ 0.12
CLN6-201ENST00000249806 EMP1P54849 157 aa15.81■□□□□ 0.12
CLN6-201ENST00000249806 XCL2Q9UBD3 114 aa15.81■□□□□ 0.12
CLN6-201ENST00000249806 TSSC4Q9Y5U2 329 aaPredicted RBP15.81■□□□□ 0.12
CLN6-201ENST00000249806 M0R2P5 195 aa15.8■□□□□ 0.12
CLN6-201ENST00000249806 HECTD1Q9ULT8 2610 aa15.8■□□□□ 0.12
CLN6-201ENST00000249806 JMJD1CQ15652 2540 aa15.8■□□□□ 0.12
CLN6-201ENST00000249806 A6NDN8 102 aa15.8■□□□□ 0.12
CLN6-201ENST00000249806 AMMECR1LQ6DCA0 310 aa15.8■□□□□ 0.12
CLN6-201ENST00000249806 C16orf95Q9H693 158 aa15.8■□□□□ 0.12
CLN6-201ENST00000249806 SETXQ7Z333 2677 aaKnown RBP15.8■□□□□ 0.12
CLN6-201ENST00000249806 NOTCH3Q9UM47 2321 aa15.79■□□□□ 0.12
CLN6-201ENST00000249806 TRAV25A0A0B4J276 109 aa15.79■□□□□ 0.12
CLN6-201ENST00000249806 GCSHP23434 173 aa15.79■□□□□ 0.12
CLN6-201ENST00000249806 ZNF415Q09FC8 603 aa15.79■□□□□ 0.12
CLN6-201ENST00000249806 C11orf72Q8NBR9 251 aa15.79■□□□□ 0.12
CLN6-201ENST00000249806 JMJD8Q96S16 334 aa15.79■□□□□ 0.12
CLN6-201ENST00000249806 Q9UF83 564 aa15.79■□□□□ 0.12
CLN6-201ENST00000249806 IGLV4-69A0A075B6H9 119 aa15.78■□□□□ 0.12
CLN6-201ENST00000249806 PMVKQ15126 192 aa15.78■□□□□ 0.12
CLN6-201ENST00000249806 TIMM17AQ99595 171 aa15.78■□□□□ 0.12
CLN6-201ENST00000249806 OPRPNQ99935 248 aaPredicted RBP15.78■□□□□ 0.12
CLN6-201ENST00000249806 CST9LQ9H4G1 147 aa15.78■□□□□ 0.12
CLN6-201ENST00000249806 LINC01549A6NIU2 74 aa15.78■□□□□ 0.12
CLN6-201ENST00000249806 I3L3M4 83 aa15.78■□□□□ 0.12
CLN6-201ENST00000249806 INSP01308 110 aa15.78■□□□□ 0.12
CLN6-201ENST00000249806 STHQ8IWL8 128 aa15.78■□□□□ 0.12
CLN6-201ENST00000249806 TMEM141Q96I45 108 aa15.78■□□□□ 0.12
CLN6-201ENST00000249806 OR11H12B2RN74 326 aa15.77■□□□□ 0.12
CLN6-201ENST00000249806 FXYD2P54710 66 aa15.77■□□□□ 0.12
CLN6-201ENST00000249806 UFSP1Q6NVU6 142 aa15.77■□□□□ 0.12
CLN6-201ENST00000249806 Q6ZSN1 163 aa15.77■□□□□ 0.12
CLN6-201ENST00000249806 OR11H2Q8NH07 326 aa15.77■□□□□ 0.12
CLN6-201ENST00000249806 C11orf86A6NJI1 115 aa15.76■□□□□ 0.11
CLN6-201ENST00000249806 NSUN5P1Q3KNT7 163 aa15.76■□□□□ 0.11
CLN6-201ENST00000249806 RAB37Q96AX2 223 aa15.76■□□□□ 0.11
CLN6-201ENST00000249806 HIVEP2P31629 2446 aa15.76■□□□□ 0.11
CLN6-201ENST00000249806 A8MWV9 139 aa15.76■□□□□ 0.11
CLN6-201ENST00000249806 H3BRM9 83 aa15.76■□□□□ 0.11
CLN6-201ENST00000249806 AZU1P20160 251 aa15.76■□□□□ 0.11
CLN6-201ENST00000249806 NAA38Q9BRA0 125 aaKnown RBP15.76■□□□□ 0.11
CLN6-201ENST00000249806 IGHV3OR16-12A0A075B7B8 117 aa15.75■□□□□ 0.11
CLN6-201ENST00000249806 RHOHQ15669 191 aa15.75■□□□□ 0.11
CLN6-201ENST00000249806 CFAP126Q5VTH2 177 aa15.75■□□□□ 0.11
CLN6-201ENST00000249806 MRPL16Q9NX20 251 aaKnown RBP15.75■□□□□ 0.11
CLN6-201ENST00000249806 NOTCH2Q04721 2471 aa15.75■□□□□ 0.11
CLN6-201ENST00000249806 ZNF418Q8TF45 676 aaPredicted RBP15.75■□□□□ 0.11
CLN6-201ENST00000249806 PRADC1Q9BSG0 188 aa15.75■□□□□ 0.11
CLN6-201ENST00000249806 E9PLD3 99 aa15.74■□□□□ 0.11
CLN6-201ENST00000249806 C20orf203Q8NBC4 194 aa15.74■□□□□ 0.11
CLN6-201ENST00000249806 SAP30O75446 220 aa15.74■□□□□ 0.11
CLN6-201ENST00000249806 HILS1P60008 231 aa15.74■□□□□ 0.11
CLN6-201ENST00000249806 CLUHP3Q96NS8 147 aa15.74■□□□□ 0.11
CLN6-201ENST00000249806 LINC00467Q9BRT7 94 aa15.74■□□□□ 0.11
CLN6-201ENST00000249806 MYMXA0A1B0GTQ4 84 aa15.73■□□□□ 0.11
CLN6-201ENST00000249806 C1orf158Q8N1D5 194 aa15.73■□□□□ 0.11
CLN6-201ENST00000249806 C9orf118A6NHY6 69 aa15.72■□□□□ 0.11
CLN6-201ENST00000249806 CEND1Q8N111 149 aa15.72■□□□□ 0.11
CLN6-201ENST00000249806 OR4C5Q8NGB2 326 aa15.72■□□□□ 0.11
CLN6-201ENST00000249806 EDA2RQ9HAV5 297 aa15.72■□□□□ 0.11
CLN6-201ENST00000249806 H3BUT2 72 aa15.72■□□□□ 0.11
CLN6-201ENST00000249806 ZNRF2Q8NHG8 242 aa15.72■□□□□ 0.11
CLN6-201ENST00000249806 PIK3CD-AS1Q5SR53 167 aa15.71■□□□□ 0.11
CLN6-201ENST00000249806 SCGB2A2Q13296 93 aa15.71■□□□□ 0.1
CLN6-201ENST00000249806 TNFRSF18Q9Y5U5 241 aa15.71■□□□□ 0.1
CLN6-201ENST00000249806 ADARB2-AS1A8MUL3 147 aa15.7■□□□□ 0.1
CLN6-201ENST00000249806 PTH2Q96A98 100 aa15.7■□□□□ 0.1
CLN6-201ENST00000249806 SPXQ9BT56 116 aa15.7■□□□□ 0.1
CLN6-201ENST00000249806 TM2D2Q9BX73 214 aa15.7■□□□□ 0.1
CLN6-201ENST00000249806 PAPPA-AS1Q5QFB9 102 aa15.69■□□□□ 0.1
CLN6-201ENST00000249806 WFDC10AQ9H1F0 79 aa15.69■□□□□ 0.1
CLN6-201ENST00000249806 K7ERJ3 54 aa15.68■□□□□ 0.1
CLN6-201ENST00000249806 SMIM13P0DJ93 91 aa15.68■□□□□ 0.1
CLN6-201ENST00000249806 BEAN1Q3B7T3 259 aa15.68■□□□□ 0.1
CLN6-201ENST00000249806 TMEM170BQ5T4T1 132 aa15.68■□□□□ 0.1
CLN6-201ENST00000249806 HIST1H4GQ99525 98 aa15.68■□□□□ 0.1
CLN6-201ENST00000249806 ZNF815PA8K554 130 aa15.67■□□□□ 0.1
CLN6-201ENST00000249806 NHP2Q9NX24 153 aaKnown RBP15.67■□□□□ 0.1
CLN6-201ENST00000249806 IGLV4-3A0A075B6K6 122 aa15.66■□□□□ 0.1
CLN6-201ENST00000249806 CEMP1Q6PRD7 247 aaPredicted RBP15.66■□□□□ 0.1
CLN6-201ENST00000249806 PLEKHB2Q96CS7 222 aa15.66■□□□□ 0.1
CLN6-201ENST00000249806 RS1O15537 224 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms