RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 PRM2P04554 102 aa14.35□□□□□ -0.11
CDC42EP1-201ENST00000249014 DLX4Q92988 240 aaPredicted RBP14.35□□□□□ -0.11
CDC42EP1-201ENST00000249014 TMEM141Q96I45 108 aa14.35□□□□□ -0.11
CDC42EP1-201ENST00000249014 TRPT1Q86TN4 253 aaKnown RBP14.34□□□□□ -0.11
CDC42EP1-201ENST00000249014 SPCS1Q9Y6A9 102 aa14.34□□□□□ -0.11
CDC42EP1-201ENST00000249014 CD300EQ496F6 205 aaPredicted RBP14.34□□□□□ -0.11
CDC42EP1-201ENST00000249014 OCIAD2Q56VL3 154 aa14.34□□□□□ -0.11
CDC42EP1-201ENST00000249014 ITPR3Q14573 2671 aa14.33□□□□□ -0.11
CDC42EP1-201ENST00000249014 AKAP9Q99996 3911 aa14.33□□□□□ -0.11
CDC42EP1-201ENST00000249014 PEMTQ9UBM1 199 aa14.33□□□□□ -0.11
CDC42EP1-201ENST00000249014 P0DMU3 169 aa14.33□□□□□ -0.12
CDC42EP1-201ENST00000249014 FAM231AP0DMU4 169 aa14.33□□□□□ -0.12
CDC42EP1-201ENST00000249014 FAM231CP0DMU5 169 aa14.33□□□□□ -0.12
CDC42EP1-201ENST00000249014 FABP2P12104 132 aa14.33□□□□□ -0.12
CDC42EP1-201ENST00000249014 NSUN5P1Q3KNT7 163 aa14.33□□□□□ -0.12
CDC42EP1-201ENST00000249014 KLHL30-AS1Q8NEE0 82 aa14.32□□□□□ -0.12
CDC42EP1-201ENST00000249014 ZNF815PA8K554 130 aa14.32□□□□□ -0.12
CDC42EP1-201ENST00000249014 OPRPNQ99935 248 aaPredicted RBP14.32□□□□□ -0.12
CDC42EP1-201ENST00000249014 C12orf74Q32Q52 190 aa14.31□□□□□ -0.12
CDC42EP1-201ENST00000249014 ZNRF2Q8NHG8 242 aa14.31□□□□□ -0.12
CDC42EP1-201ENST00000249014 NACAE9PAV3 2078 aa14.3□□□□□ -0.12
CDC42EP1-201ENST00000249014 TRAV2A0A0B4J234 112 aa14.3□□□□□ -0.12
CDC42EP1-201ENST00000249014 RHOHQ15669 191 aa14.3□□□□□ -0.12
CDC42EP1-201ENST00000249014 PLEKHB2Q96CS7 222 aa14.3□□□□□ -0.12
CDC42EP1-201ENST00000249014 MAP6D1Q9H9H5 199 aa14.3□□□□□ -0.12
CDC42EP1-201ENST00000249014 IGHV3-73A0A0B4J1V6 119 aa14.3□□□□□ -0.12
CDC42EP1-201ENST00000249014 PROK1P58294 105 aa14.3□□□□□ -0.12
CDC42EP1-201ENST00000249014 PAPPA-AS1Q5QFB9 102 aa14.3□□□□□ -0.12
CDC42EP1-201ENST00000249014 Q6ZSV7 163 aa14.3□□□□□ -0.12
CDC42EP1-201ENST00000249014 WFDC11Q8NEX6 87 aa14.3□□□□□ -0.12
CDC42EP1-201ENST00000249014 SONP18583 2426 aaKnown RBP14.29□□□□□ -0.12
CDC42EP1-201ENST00000249014 RNF151Q2KHN1 245 aa14.29□□□□□ -0.12
CDC42EP1-201ENST00000249014 CUBNO60494 3623 aa14.29□□□□□ -0.12
CDC42EP1-201ENST00000249014 I3L3M4 83 aa14.29□□□□□ -0.12
CDC42EP1-201ENST00000249014 DEFB114Q30KQ6 69 aa14.29□□□□□ -0.12
CDC42EP1-201ENST00000249014 OR5A1Q8NGJ0 315 aa14.29□□□□□ -0.12
CDC42EP1-201ENST00000249014 DYNLRB2Q8TF09 96 aa14.29□□□□□ -0.12
CDC42EP1-201ENST00000249014 IGLL5B9A064 214 aa14.28□□□□□ -0.12
CDC42EP1-201ENST00000249014 C20orf203Q8NBC4 194 aa14.28□□□□□ -0.12
CDC42EP1-201ENST00000249014 SPAG8Q99932 426 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP1-201ENST00000249014 CHD6Q8TD26 2715 aa14.28□□□□□ -0.12
CDC42EP1-201ENST00000249014 SCGB2A2Q13296 93 aa14.27□□□□□ -0.12
CDC42EP1-201ENST00000249014 TMEM170BQ5T4T1 132 aa14.27□□□□□ -0.13
CDC42EP1-201ENST00000249014 TSPEAR-AS2P59090 65 aa14.26□□□□□ -0.13
CDC42EP1-201ENST00000249014 SCGB1D4Q6XE38 83 aa14.26□□□□□ -0.13
CDC42EP1-201ENST00000249014 TMEM86BQ8N661 226 aa14.26□□□□□ -0.13
CDC42EP1-201ENST00000249014 NF1P21359 2839 aa14.26□□□□□ -0.13
CDC42EP1-201ENST00000249014 DNAJC9-AS1A6NH13 148 aa14.26□□□□□ -0.13
CDC42EP1-201ENST00000249014 HERVK_113P61574 105 aa14.26□□□□□ -0.13
CDC42EP1-201ENST00000249014 EDA2RQ9HAV5 297 aa14.26□□□□□ -0.13
CDC42EP1-201ENST00000249014 A0A1B0GWB2 263 aa14.25□□□□□ -0.13
CDC42EP1-201ENST00000249014 M0R2P5 195 aa14.25□□□□□ -0.13
CDC42EP1-201ENST00000249014 SAP30O75446 220 aa14.25□□□□□ -0.13
CDC42EP1-201ENST00000249014 Q9UF83 564 aa14.25□□□□□ -0.13
CDC42EP1-201ENST00000249014 HIST2H2BCQ6DN03 193 aa14.24□□□□□ -0.13
CDC42EP1-201ENST00000249014 C11orf44Q8N8P7 122 aa14.24□□□□□ -0.13
CDC42EP1-201ENST00000249014 TENM4Q6N022 2769 aa14.24□□□□□ -0.13
CDC42EP1-201ENST00000249014 RAX2Q96IS3 184 aa14.24□□□□□ -0.13
CDC42EP1-201ENST00000249014 ZNF479Q96JC4 524 aa14.24□□□□□ -0.13
CDC42EP1-201ENST00000249014 FLNAP21333 2647 aaKnown RBP14.23□□□□□ -0.13
CDC42EP1-201ENST00000249014 Q6ZSN1 163 aa14.23□□□□□ -0.13
CDC42EP1-201ENST00000249014 NFE4Q86UQ8 179 aa14.23□□□□□ -0.13
CDC42EP1-201ENST00000249014 ESM1Q9NQ30 184 aa14.23□□□□□ -0.13
CDC42EP1-201ENST00000249014 ZNF415Q09FC8 603 aa14.23□□□□□ -0.13
CDC42EP1-201ENST00000249014 C11orf72Q8NBR9 251 aa14.23□□□□□ -0.13
CDC42EP1-201ENST00000249014 IGLV4-3A0A075B6K6 122 aa14.22□□□□□ -0.13
CDC42EP1-201ENST00000249014 A0A0J9YY99 117 aa14.22□□□□□ -0.13
CDC42EP1-201ENST00000249014 A8MWV9 139 aa14.22□□□□□ -0.13
CDC42EP1-201ENST00000249014 LINC01587Q99440 93 aa14.22□□□□□ -0.13
CDC42EP1-201ENST00000249014 PCP4P48539 62 aa14.22□□□□□ -0.13
CDC42EP1-201ENST00000249014 A0A1W2PRX2 142 aa14.21□□□□□ -0.13
CDC42EP1-201ENST00000249014 K7ERU9 68 aa14.21□□□□□ -0.13
CDC42EP1-201ENST00000249014 SRSF9Q13242 221 aaKnown RBP eCLIP14.21□□□□□ -0.13
CDC42EP1-201ENST00000249014 CFAP126Q5VTH2 177 aa14.21□□□□□ -0.13
CDC42EP1-201ENST00000249014 AMELXQ99217 191 aa14.21□□□□□ -0.13
CDC42EP1-201ENST00000249014 WNK1Q9H4A3 2382 aa14.21□□□□□ -0.13
CDC42EP1-201ENST00000249014 RRN3P1Q2M238 152 aa14.2□□□□□ -0.14
CDC42EP1-201ENST00000249014 ODF3L2Q3SX64 289 aa14.2□□□□□ -0.14
CDC42EP1-201ENST00000249014 FAM104AQ969W3 186 aa14.2□□□□□ -0.14
CDC42EP1-201ENST00000249014 CD28P10747 220 aa14.2□□□□□ -0.14
CDC42EP1-201ENST00000249014 PIK3CD-AS1Q5SR53 167 aa14.2□□□□□ -0.14
CDC42EP1-201ENST00000249014 CCDC168Q8NDH2 2452 aa14.2□□□□□ -0.14
CDC42EP1-201ENST00000249014 TNFRSF18Q9Y5U5 241 aa14.19□□□□□ -0.14
CDC42EP1-201ENST00000249014 TMEM223A0PJW6 202 aa14.19□□□□□ -0.14
CDC42EP1-201ENST00000249014 J3QQQ9 107 aa14.19□□□□□ -0.14
CDC42EP1-201ENST00000249014 INSP01308 110 aa14.19□□□□□ -0.14
CDC42EP1-201ENST00000249014 LINC00467Q9BRT7 94 aa14.19□□□□□ -0.14
CDC42EP1-201ENST00000249014 MRPL16Q9NX20 251 aaKnown RBP14.19□□□□□ -0.14
CDC42EP1-201ENST00000249014 A0A0J9YXV3 536 aa14.18□□□□□ -0.14
CDC42EP1-201ENST00000249014 FHL3Q13643 280 aa14.18□□□□□ -0.14
CDC42EP1-201ENST00000249014 PTH2Q96A98 100 aa14.18□□□□□ -0.14
CDC42EP1-201ENST00000249014 VCX2Q9H322 139 aa14.18□□□□□ -0.14
CDC42EP1-201ENST00000249014 ZNF22P17026 224 aaPredicted RBP14.17□□□□□ -0.14
CDC42EP1-201ENST00000249014 C21orf62-AS1Q17RA5 79 aa14.17□□□□□ -0.14
CDC42EP1-201ENST00000249014 CEMP1Q6PRD7 247 aaPredicted RBP14.17□□□□□ -0.14
CDC42EP1-201ENST00000249014 VPS25Q9BRG1 176 aa14.17□□□□□ -0.14
CDC42EP1-201ENST00000249014 XCL2Q9UBD3 114 aa14.17□□□□□ -0.14
CDC42EP1-201ENST00000249014 UBE2D1P51668 147 aa14.17□□□□□ -0.14
CDC42EP1-201ENST00000249014 PDZD2O15018 2839 aa14.17□□□□□ -0.14
CDC42EP1-201ENST00000249014 RHODO00212 210 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms