RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 HINT1P49773 126 aaPredicted RBP13.43□□□□□ -0.26
HOXC11-201ENST00000243082 TCTAP57738 103 aa13.43□□□□□ -0.26
HOXC11-201ENST00000243082 A8MWV9 139 aa13.42□□□□□ -0.26
HOXC11-201ENST00000243082 AZU1P20160 251 aa13.42□□□□□ -0.26
HOXC11-201ENST00000243082 SPXQ9BT56 116 aa13.42□□□□□ -0.26
HOXC11-201ENST00000243082 EDA2RQ9HAV5 297 aa13.42□□□□□ -0.26
HOXC11-201ENST00000243082 FN1P02751 2386 aaKnown RBP13.42□□□□□ -0.26
HOXC11-201ENST00000243082 IGHV3-73A0A0B4J1V6 119 aa13.42□□□□□ -0.26
HOXC11-201ENST00000243082 ERASQ7Z444 233 aa13.42□□□□□ -0.26
HOXC11-201ENST00000243082 NEXN-AS1Q8NBZ9 246 aa13.42□□□□□ -0.26
HOXC11-201ENST00000243082 WFDC10AQ9H1F0 79 aa13.42□□□□□ -0.26
HOXC11-201ENST00000243082 FOSL1P15407 271 aa13.41□□□□□ -0.26
HOXC11-201ENST00000243082 C2orf91Q6ZV80 131 aa13.41□□□□□ -0.26
HOXC11-201ENST00000243082 BOD1L2Q8IYS8 172 aa13.41□□□□□ -0.26
HOXC11-201ENST00000243082 TMEM208Q9BTX3 173 aa13.41□□□□□ -0.26
HOXC11-201ENST00000243082 CYSLTR1Q9Y271 337 aa13.41□□□□□ -0.26
HOXC11-201ENST00000243082 G0S2P27469 103 aa13.4□□□□□ -0.26
HOXC11-201ENST00000243082 COL5A1-AS1Q5SY13 56 aa13.4□□□□□ -0.26
HOXC11-201ENST00000243082 CFAP126Q5VTH2 177 aa13.4□□□□□ -0.26
HOXC11-201ENST00000243082 BAALCQ8WXS3 180 aa13.4□□□□□ -0.26
HOXC11-201ENST00000243082 GIG44P09565 113 aaPredicted RBP13.4□□□□□ -0.26
HOXC11-201ENST00000243082 RIPPLY3P57055 190 aa13.4□□□□□ -0.26
HOXC11-201ENST00000243082 LINC00482Q8N8I6 264 aa13.4□□□□□ -0.26
HOXC11-201ENST00000243082 TP53TG1Q9Y2A0 90 aa13.4□□□□□ -0.26
HOXC11-201ENST00000243082 C2CD3Q4AC94 2353 aa13.4□□□□□ -0.27
HOXC11-201ENST00000243082 IGHV3OR16-12A0A075B7B8 117 aa13.39□□□□□ -0.27
HOXC11-201ENST00000243082 H7C1H1 209 aa13.39□□□□□ -0.27
HOXC11-201ENST00000243082 MRPL16Q9NX20 251 aaKnown RBP13.39□□□□□ -0.27
HOXC11-201ENST00000243082 NACAE9PAV3 2078 aa13.39□□□□□ -0.27
HOXC11-201ENST00000243082 IGIPA6NJ69 53 aa13.39□□□□□ -0.27
HOXC11-201ENST00000243082 PF4P02776 101 aa13.39□□□□□ -0.27
HOXC11-201ENST00000243082 RPL39P62891 51 aaKnown RBP13.39□□□□□ -0.27
HOXC11-201ENST00000243082 MPV17L2Q567V2 206 aa13.39□□□□□ -0.27
HOXC11-201ENST00000243082 ZC2HC1BQ5TFG8 222 aa13.39□□□□□ -0.27
HOXC11-201ENST00000243082 JMJD1CQ15652 2540 aa13.38□□□□□ -0.27
HOXC11-201ENST00000243082 IGKV2D-26A0A0A0MRZ7 120 aa13.38□□□□□ -0.27
HOXC11-201ENST00000243082 LINC01549A6NIU2 74 aa13.38□□□□□ -0.27
HOXC11-201ENST00000243082 F8VRH5 84 aa13.38□□□□□ -0.27
HOXC11-201ENST00000243082 TSHBP01222 138 aa13.38□□□□□ -0.27
HOXC11-201ENST00000243082 P0DMU3 169 aa13.38□□□□□ -0.27
HOXC11-201ENST00000243082 FAM231AP0DMU4 169 aa13.38□□□□□ -0.27
HOXC11-201ENST00000243082 FAM231CP0DMU5 169 aa13.38□□□□□ -0.27
HOXC11-201ENST00000243082 NMUP48645 174 aa13.38□□□□□ -0.27
HOXC11-201ENST00000243082 Q6ZSN1 163 aa13.38□□□□□ -0.27
HOXC11-201ENST00000243082 PCP2Q8IVA1 136 aa13.38□□□□□ -0.27
HOXC11-201ENST00000243082 IL17DQ8TAD2 202 aa13.38□□□□□ -0.27
HOXC11-201ENST00000243082 DLEU1O43261 78 aa13.37□□□□□ -0.27
HOXC11-201ENST00000243082 CRLF1O75462 422 aa13.37□□□□□ -0.27
HOXC11-201ENST00000243082 PLNP26678 52 aa13.37□□□□□ -0.27
HOXC11-201ENST00000243082 GTSCR1Q86UQ5 136 aa13.37□□□□□ -0.27
HOXC11-201ENST00000243082 CHTOPQ9Y3Y2 248 aaKnown RBP13.37□□□□□ -0.27
HOXC11-201ENST00000243082 PRSS29PA6NIE9 313 aa13.37□□□□□ -0.27
HOXC11-201ENST00000243082 RNASE8Q8TDE3 154 aaKnown RBP13.37□□□□□ -0.27
HOXC11-201ENST00000243082 I3L3M4 83 aa13.36□□□□□ -0.27
HOXC11-201ENST00000243082 RS1O15537 224 aa13.36□□□□□ -0.27
HOXC11-201ENST00000243082 RHOHQ15669 191 aa13.36□□□□□ -0.27
HOXC11-201ENST00000243082 Q9UF83 564 aa13.35□□□□□ -0.27
HOXC11-201ENST00000243082 RPL35AP18077 110 aaKnown RBP13.35□□□□□ -0.27
HOXC11-201ENST00000243082 TIMM17AQ99595 171 aa13.35□□□□□ -0.27
HOXC11-201ENST00000243082 RHODO00212 210 aa13.34□□□□□ -0.27
HOXC11-201ENST00000243082 BVES-AS1Q5T3Y7 98 aa13.34□□□□□ -0.27
HOXC11-201ENST00000243082 TMEM141Q96I45 108 aa13.34□□□□□ -0.27
HOXC11-201ENST00000243082 IGHV3-53P01767 116 aa13.33□□□□□ -0.28
HOXC11-201ENST00000243082 C12orf54Q6X4T0 127 aa13.33□□□□□ -0.28
HOXC11-201ENST00000243082 TMEM263Q8WUH6 116 aaKnown RBP13.33□□□□□ -0.28
HOXC11-201ENST00000243082 SIVA1O15304 175 aa13.32□□□□□ -0.28
HOXC11-201ENST00000243082 CSNK1G2-AS1Q8NCQ2 148 aa13.32□□□□□ -0.28
HOXC11-201ENST00000243082 TTTY13Q9BZ97 58 aa13.32□□□□□ -0.28
HOXC11-201ENST00000243082 TNFRSF18Q9Y5U5 241 aa13.32□□□□□ -0.28
HOXC11-201ENST00000243082 C20orf203Q8NBC4 194 aa13.32□□□□□ -0.28
HOXC11-201ENST00000243082 SPATA3Q8NHX4 192 aa13.32□□□□□ -0.28
HOXC11-201ENST00000243082 TRGV1A0A0A0MS02 117 aa13.3□□□□□ -0.28
HOXC11-201ENST00000243082 PMVKQ15126 192 aa13.3□□□□□ -0.28
HOXC11-201ENST00000243082 CST9LQ9H4G1 147 aa13.3□□□□□ -0.28
HOXC11-201ENST00000243082 VWFP04275 2813 aa13.3□□□□□ -0.28
HOXC11-201ENST00000243082 C1QTNF4Q9BXJ3 329 aa13.3□□□□□ -0.28
HOXC11-201ENST00000243082 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.29□□□□□ -0.28
HOXC11-201ENST00000243082 TENM1Q9UKZ4 2725 aa13.29□□□□□ -0.28
HOXC11-201ENST00000243082 IGLV4-69A0A075B6H9 119 aa13.29□□□□□ -0.28
HOXC11-201ENST00000243082 PLAC8L1A1L4L8 177 aa13.29□□□□□ -0.28
HOXC11-201ENST00000243082 Q6ZTI0 123 aa13.29□□□□□ -0.28
HOXC11-201ENST00000243082 DAZ2Q13117 558 aaKnown RBP13.28□□□□□ -0.28
HOXC11-201ENST00000243082 TMEM97Q5BJF2 176 aa13.28□□□□□ -0.28
HOXC11-201ENST00000243082 OR4C5Q8NGB2 326 aa13.28□□□□□ -0.28
HOXC11-201ENST00000243082 DNAJC30Q96LL9 226 aa13.28□□□□□ -0.28
HOXC11-201ENST00000243082 OPRPNQ99935 248 aaPredicted RBP13.28□□□□□ -0.28
HOXC11-201ENST00000243082 ZNF479Q96JC4 524 aa13.27□□□□□ -0.28
HOXC11-201ENST00000243082 CITED1Q99966 193 aa13.27□□□□□ -0.28
HOXC11-201ENST00000243082 NOTCH3Q9UM47 2321 aa13.27□□□□□ -0.29
HOXC11-201ENST00000243082 ZNF25P17030 456 aaPredicted RBP13.27□□□□□ -0.29
HOXC11-201ENST00000243082 INSL3P51460 131 aa13.27□□□□□ -0.29
HOXC11-201ENST00000243082 MAPKAPK5-AS1Q8N8E1 139 aa13.27□□□□□ -0.29
HOXC11-201ENST00000243082 NOP10Q9NPE3 64 aaKnown RBP13.27□□□□□ -0.29
HOXC11-201ENST00000243082 C11orf86A6NJI1 115 aa13.26□□□□□ -0.29
HOXC11-201ENST00000243082 Q6ZVH6 145 aa13.26□□□□□ -0.29
HOXC11-201ENST00000243082 C16orf74Q96GX8 76 aa13.26□□□□□ -0.29
HOXC11-201ENST00000243082 TRAV8-6A0A0B4J262 113 aa13.25□□□□□ -0.29
HOXC11-201ENST00000243082 TRBV25-1A0A075B6N4 114 aa13.25□□□□□ -0.29
HOXC11-201ENST00000243082 EMP1P54849 157 aa13.25□□□□□ -0.29
HOXC11-201ENST00000243082 HSD52Q0P140 79 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms