RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 C1orf158Q8N1D5 194 aa16.93■□□□□ 0.3
MSX2-201ENST00000239243 A0A1B0GV90 55 aa16.92■□□□□ 0.3
MSX2-201ENST00000239243 PRM2P04554 102 aa16.92■□□□□ 0.3
MSX2-201ENST00000239243 PLNP26678 52 aa16.92■□□□□ 0.3
MSX2-201ENST00000239243 RIPPLY3P57055 190 aa16.91■□□□□ 0.3
MSX2-201ENST00000239243 LURAP1LQ8IV03 231 aa16.91■□□□□ 0.3
MSX2-201ENST00000239243 C19orf73Q9NVV2 129 aa16.91■□□□□ 0.3
MSX2-201ENST00000239243 RHOHQ15669 191 aa16.9■□□□□ 0.3
MSX2-201ENST00000239243 UFSP1Q6NVU6 142 aa16.9■□□□□ 0.3
MSX2-201ENST00000239243 MRPL35Q9NZE8 188 aaKnown RBP16.9■□□□□ 0.3
MSX2-201ENST00000239243 C1QTNF4Q9BXJ3 329 aa16.9■□□□□ 0.3
MSX2-201ENST00000239243 HHLA3Q9XRX5 114 aa16.9■□□□□ 0.3
MSX2-201ENST00000239243 F8VRH5 84 aa16.89■□□□□ 0.29
MSX2-201ENST00000239243 COL5A1-AS1Q5SY13 56 aa16.89■□□□□ 0.29
MSX2-201ENST00000239243 CFAP126Q5VTH2 177 aa16.89■□□□□ 0.29
MSX2-201ENST00000239243 NEXN-AS1Q8NBZ9 246 aa16.89■□□□□ 0.29
MSX2-201ENST00000239243 TP53TG1Q9Y2A0 90 aa16.89■□□□□ 0.29
MSX2-201ENST00000239243 IGHV3OR16-12A0A075B7B8 117 aa16.89■□□□□ 0.29
MSX2-201ENST00000239243 I3L3M4 83 aa16.88■□□□□ 0.29
MSX2-201ENST00000239243 NSD1Q96L73 2696 aaPredicted RBP16.88■□□□□ 0.29
MSX2-201ENST00000239243 BAALCQ8WXS3 180 aa16.88■□□□□ 0.29
MSX2-201ENST00000239243 DLEU1O43261 78 aa16.87■□□□□ 0.29
MSX2-201ENST00000239243 IL17DQ8TAD2 202 aa16.87■□□□□ 0.29
MSX2-201ENST00000239243 TMEM263Q8WUH6 116 aaKnown RBP16.87■□□□□ 0.29
MSX2-201ENST00000239243 TMEM141Q96I45 108 aa16.87■□□□□ 0.29
MSX2-201ENST00000239243 MRPL16Q9NX20 251 aaKnown RBP16.87■□□□□ 0.29
MSX2-201ENST00000239243 CHTOPQ9Y3Y2 248 aaKnown RBP16.87■□□□□ 0.29
MSX2-201ENST00000239243 AZU1P20160 251 aa16.86■□□□□ 0.29
MSX2-201ENST00000239243 INSL3P51460 131 aa16.86■□□□□ 0.29
MSX2-201ENST00000239243 BOD1L2Q8IYS8 172 aa16.86■□□□□ 0.29
MSX2-201ENST00000239243 TIMM17AQ99595 171 aa16.86■□□□□ 0.29
MSX2-201ENST00000239243 TP73-AS1Q9UF72 201 aa16.86■□□□□ 0.29
MSX2-201ENST00000239243 IGHV3-73A0A0B4J1V6 119 aa16.86■□□□□ 0.29
MSX2-201ENST00000239243 RS1O15537 224 aa16.86■□□□□ 0.29
MSX2-201ENST00000239243 HINT1P49773 126 aaPredicted RBP16.86■□□□□ 0.29
MSX2-201ENST00000239243 RNASE8Q8TDE3 154 aaKnown RBP16.86■□□□□ 0.29
MSX2-201ENST00000239243 FGF6P10767 208 aa16.85■□□□□ 0.29
MSX2-201ENST00000239243 ZC2HC1BQ5TFG8 222 aa16.85■□□□□ 0.29
MSX2-201ENST00000239243 NMUP48645 174 aa16.85■□□□□ 0.29
MSX2-201ENST00000239243 C12orf54Q6X4T0 127 aa16.85■□□□□ 0.29
MSX2-201ENST00000239243 WFDC10AQ9H1F0 79 aa16.85■□□□□ 0.29
MSX2-201ENST00000239243 IGIPA6NJ69 53 aa16.84■□□□□ 0.29
MSX2-201ENST00000239243 TNFRSF18Q9Y5U5 241 aa16.84■□□□□ 0.29
MSX2-201ENST00000239243 SIVA1O15304 175 aa16.83■□□□□ 0.28
MSX2-201ENST00000239243 TSHBP01222 138 aa16.83■□□□□ 0.28
MSX2-201ENST00000239243 IGHV3-53P01767 116 aa16.83■□□□□ 0.28
MSX2-201ENST00000239243 RPL35AP18077 110 aaKnown RBP16.83■□□□□ 0.28
MSX2-201ENST00000239243 GIG44P09565 113 aaPredicted RBP16.82■□□□□ 0.28
MSX2-201ENST00000239243 DNAJC30Q96LL9 226 aa16.82■□□□□ 0.28
MSX2-201ENST00000239243 FN1P02751 2386 aaKnown RBP16.82■□□□□ 0.28
MSX2-201ENST00000239243 C9orf66Q5T8R8 295 aa16.82■□□□□ 0.28
MSX2-201ENST00000239243 C2orf91Q6ZV80 131 aa16.82■□□□□ 0.28
MSX2-201ENST00000239243 PRSS29PA6NIE9 313 aa16.81■□□□□ 0.28
MSX2-201ENST00000239243 RPL39P62891 51 aaKnown RBP16.81■□□□□ 0.28
MSX2-201ENST00000239243 TCTAP57738 103 aa16.81■□□□□ 0.28
MSX2-201ENST00000239243 C16orf74Q96GX8 76 aa16.81■□□□□ 0.28
MSX2-201ENST00000239243 C2CD3Q4AC94 2353 aa16.81■□□□□ 0.28
MSX2-201ENST00000239243 MPV17L2Q567V2 206 aa16.8■□□□□ 0.28
MSX2-201ENST00000239243 GTSCR1Q86UQ5 136 aa16.8■□□□□ 0.28
MSX2-201ENST00000239243 NACAE9PAV3 2078 aa16.8■□□□□ 0.28
MSX2-201ENST00000239243 TRGV1A0A0A0MS02 117 aa16.8■□□□□ 0.28
MSX2-201ENST00000239243 PMVKQ15126 192 aa16.8■□□□□ 0.28
MSX2-201ENST00000239243 C20orf203Q8NBC4 194 aa16.8■□□□□ 0.28
MSX2-201ENST00000239243 DEFB104AQ8WTQ1 72 aa16.8■□□□□ 0.28
MSX2-201ENST00000239243 PAPPA-AS1Q5QFB9 102 aa16.79■□□□□ 0.28
MSX2-201ENST00000239243 HIVEP1P15822 2718 aa16.79■□□□□ 0.28
MSX2-201ENST00000239243 P0DMU3 169 aa16.78■□□□□ 0.28
MSX2-201ENST00000239243 FAM231AP0DMU4 169 aa16.78■□□□□ 0.28
MSX2-201ENST00000239243 FAM231CP0DMU5 169 aa16.78■□□□□ 0.28
MSX2-201ENST00000239243 DAZ2Q13117 558 aaKnown RBP16.78■□□□□ 0.28
MSX2-201ENST00000239243 PCP2Q8IVA1 136 aa16.78■□□□□ 0.28
MSX2-201ENST00000239243 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.78■□□□□ 0.28
MSX2-201ENST00000239243 OR4C5Q8NGB2 326 aa16.78■□□□□ 0.28
MSX2-201ENST00000239243 TMEM97Q5BJF2 176 aa16.78■□□□□ 0.28
MSX2-201ENST00000239243 CSNK1G2-AS1Q8NCQ2 148 aa16.78■□□□□ 0.28
MSX2-201ENST00000239243 CITED1Q99966 193 aa16.78■□□□□ 0.28
MSX2-201ENST00000239243 Q6ZSN1 163 aa16.77■□□□□ 0.28
MSX2-201ENST00000239243 IGKV2D-26A0A0A0MRZ7 120 aa16.77■□□□□ 0.27
MSX2-201ENST00000239243 BVES-AS1Q5T3Y7 98 aa16.76■□□□□ 0.27
MSX2-201ENST00000239243 RRN3P1Q2M238 152 aa16.75■□□□□ 0.27
MSX2-201ENST00000239243 CST9LQ9H4G1 147 aa16.75■□□□□ 0.27
MSX2-201ENST00000239243 TRAV4A0A0B4J268 109 aa16.74■□□□□ 0.27
MSX2-201ENST00000239243 Q6ZTI0 123 aa16.73■□□□□ 0.27
MSX2-201ENST00000239243 NOP10Q9NPE3 64 aaKnown RBP16.73■□□□□ 0.27
MSX2-201ENST00000239243 HIGD1BQ9P298 99 aa16.72■□□□□ 0.27
MSX2-201ENST00000239243 CIDEAO60543 219 aa16.72■□□□□ 0.27
MSX2-201ENST00000239243 HSD52Q0P140 79 aa16.72■□□□□ 0.27
MSX2-201ENST00000239243 PYGO1Q9Y3Y4 419 aa16.72■□□□□ 0.27
MSX2-201ENST00000239243 NPSP0C0P6 89 aa16.71■□□□□ 0.27
MSX2-201ENST00000239243 JMJD1CQ15652 2540 aa16.7■□□□□ 0.26
MSX2-201ENST00000239243 IGLV4-69A0A075B6H9 119 aa16.7■□□□□ 0.26
MSX2-201ENST00000239243 TRBV10-1A0A0K0K1A3 114 aa16.7■□□□□ 0.26
MSX2-201ENST00000239243 OR11H2Q8NH07 326 aa16.7■□□□□ 0.26
MSX2-201ENST00000239243 ZNF479Q96JC4 524 aa16.7■□□□□ 0.26
MSX2-201ENST00000239243 OVOL2Q9BRP0 275 aa16.7■□□□□ 0.26
MSX2-201ENST00000239243 NIPBLQ6KC79 2804 aaeCLIP16.7■□□□□ 0.26
MSX2-201ENST00000239243 PLAC8L1A1L4L8 177 aa16.7■□□□□ 0.26
MSX2-201ENST00000239243 COTL1Q14019 142 aa16.69■□□□□ 0.26
MSX2-201ENST00000239243 E9PLD3 99 aa16.69■□□□□ 0.26
MSX2-201ENST00000239243 Q9UF83 564 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms