RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 VCYO14598 125 aa9.53□□□□□ -0.88
SLIRP-201ENST00000238688 SCGB1D1O95968 90 aa9.53□□□□□ -0.88
SLIRP-201ENST00000238688 RRN3P1Q2M238 152 aa9.53□□□□□ -0.88
SLIRP-201ENST00000238688 FAM19A2Q8N3H0 131 aa9.53□□□□□ -0.88
SLIRP-201ENST00000238688 DNAJC30Q96LL9 226 aa9.53□□□□□ -0.88
SLIRP-201ENST00000238688 NACAE9PAV3 2078 aa9.52□□□□□ -0.88
SLIRP-201ENST00000238688 TRBV27A0A0K0K1C4 114 aa9.52□□□□□ -0.89
SLIRP-201ENST00000238688 F5H697 171 aa9.52□□□□□ -0.89
SLIRP-201ENST00000238688 M0QY20 66 aa9.52□□□□□ -0.89
SLIRP-201ENST00000238688 RS1O15537 224 aa9.52□□□□□ -0.89
SLIRP-201ENST00000238688 ATP5LO75964 103 aa9.52□□□□□ -0.89
SLIRP-201ENST00000238688 C3orf79P0CE67 100 aa9.52□□□□□ -0.89
SLIRP-201ENST00000238688 ZNF56Q15929 161 aa9.52□□□□□ -0.89
SLIRP-201ENST00000238688 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.89
SLIRP-201ENST00000238688 TEX43Q6ZNM6 134 aa9.52□□□□□ -0.89
SLIRP-201ENST00000238688 SBSPONQ8IVN8 264 aa9.52□□□□□ -0.89
SLIRP-201ENST00000238688 KIR2DL4Q99706 377 aa9.52□□□□□ -0.89
SLIRP-201ENST00000238688 OVOL2Q9BRP0 275 aa9.52□□□□□ -0.89
SLIRP-201ENST00000238688 LOC389332A0A1B0GUA5 103 aa9.51□□□□□ -0.89
SLIRP-201ENST00000238688 A8MZ25 164 aa9.51□□□□□ -0.89
SLIRP-201ENST00000238688 HTN1P15515 57 aa9.51□□□□□ -0.89
SLIRP-201ENST00000238688 RPL35AP18077 110 aaKnown RBP9.51□□□□□ -0.89
SLIRP-201ENST00000238688 POLR2KP53803 58 aaKnown RBP9.51□□□□□ -0.89
SLIRP-201ENST00000238688 KRTDAPP60985 99 aa9.51□□□□□ -0.89
SLIRP-201ENST00000238688 UFSP1Q6NVU6 142 aa9.51□□□□□ -0.89
SLIRP-201ENST00000238688 C18orf15Q96N68 181 aa9.51□□□□□ -0.89
SLIRP-201ENST00000238688 TRAV4A0A0B4J268 109 aa9.5□□□□□ -0.89
SLIRP-201ENST00000238688 TRBV10-1A0A0K0K1A3 114 aa9.5□□□□□ -0.89
SLIRP-201ENST00000238688 SYS1-DBNDD2H3BUS1 97 aa9.5□□□□□ -0.89
SLIRP-201ENST00000238688 SPRY2O43597 315 aa9.5□□□□□ -0.89
SLIRP-201ENST00000238688 IGHV3-53P01767 116 aa9.5□□□□□ -0.89
SLIRP-201ENST00000238688 RHOHQ15669 191 aa9.5□□□□□ -0.89
SLIRP-201ENST00000238688 FAM74A4Q5TZK3 123 aa9.5□□□□□ -0.89
SLIRP-201ENST00000238688 CFAP126Q5VTH2 177 aa9.5□□□□□ -0.89
SLIRP-201ENST00000238688 DYNC2H1Q8NCM8 4307 aaKnown RBP9.49□□□□□ -0.89
SLIRP-201ENST00000238688 A0A087WWL8 130 aa9.49□□□□□ -0.89
SLIRP-201ENST00000238688 TRAV26-2A0A0B4J265 109 aa9.49□□□□□ -0.89
SLIRP-201ENST00000238688 TSTD3H0UI37 97 aa9.49□□□□□ -0.89
SLIRP-201ENST00000238688 WFDC10AQ9H1F0 79 aa9.49□□□□□ -0.89
SLIRP-201ENST00000238688 A0A096LNJ9 63 aa9.48□□□□□ -0.89
SLIRP-201ENST00000238688 GATA1P15976 413 aaPredicted RBP9.48□□□□□ -0.89
SLIRP-201ENST00000238688 AZU1P20160 251 aa9.48□□□□□ -0.89
SLIRP-201ENST00000238688 PKIAP61925 76 aa9.48□□□□□ -0.89
SLIRP-201ENST00000238688 IFI27L1Q96BM0 104 aa9.48□□□□□ -0.89
SLIRP-201ENST00000238688 IGHV3OR16-12A0A075B7B8 117 aa9.47□□□□□ -0.89
SLIRP-201ENST00000238688 SDHAF1A6NFY7 115 aa9.47□□□□□ -0.89
SLIRP-201ENST00000238688 GAS8-AS1O95177 125 aa9.47□□□□□ -0.89
SLIRP-201ENST00000238688 NPSP0C0P6 89 aa9.47□□□□□ -0.89
SLIRP-201ENST00000238688 LINC01545Q5VT33 79 aa9.47□□□□□ -0.89
SLIRP-201ENST00000238688 LGALS9CQ6DKI2 356 aa9.47□□□□□ -0.89
SLIRP-201ENST00000238688 OR4C5Q8NGB2 326 aa9.47□□□□□ -0.89
SLIRP-201ENST00000238688 JPT2Q9H910 190 aa9.47□□□□□ -0.89
SLIRP-201ENST00000238688 TRGV1A0A0A0MS02 117 aa9.46□□□□□ -0.9
SLIRP-201ENST00000238688 TEX48A0A1B0GUV7 120 aa9.46□□□□□ -0.9
SLIRP-201ENST00000238688 LYRM9A8MSI8 78 aa9.46□□□□□ -0.9
SLIRP-201ENST00000238688 I3L3M4 83 aa9.46□□□□□ -0.9
SLIRP-201ENST00000238688 NUDT3O95989 172 aa9.46□□□□□ -0.9
SLIRP-201ENST00000238688 TOMM6Q96B49 74 aa9.46□□□□□ -0.9
SLIRP-201ENST00000238688 RPL39LQ96EH5 51 aaKnown RBP9.46□□□□□ -0.9
SLIRP-201ENST00000238688 VAMP8Q9BV40 100 aa9.46□□□□□ -0.9
SLIRP-201ENST00000238688 TP53TG1Q9Y2A0 90 aa9.46□□□□□ -0.9
SLIRP-201ENST00000238688 CSMD3Q7Z407 3707 aa9.45□□□□□ -0.9
SLIRP-201ENST00000238688 PLAC8L1A1L4L8 177 aa9.45□□□□□ -0.9
SLIRP-201ENST00000238688 IGHV4-30-4P0DP06 118 aa9.45□□□□□ -0.9
SLIRP-201ENST00000238688 MIFP14174 115 aa9.45□□□□□ -0.9
SLIRP-201ENST00000238688 LINC00612Q8N6U2 182 aa9.45□□□□□ -0.9
SLIRP-201ENST00000238688 Q8N976 141 aa9.45□□□□□ -0.9
SLIRP-201ENST00000238688 MRPL16Q9NX20 251 aaKnown RBP9.45□□□□□ -0.9
SLIRP-201ENST00000238688 CYSLTR1Q9Y271 337 aa9.45□□□□□ -0.9
SLIRP-201ENST00000238688 TNFRSF18Q9Y5U5 241 aa9.45□□□□□ -0.9
SLIRP-201ENST00000238688 STARD9Q9P2P6 4700 aa9.44□□□□□ -0.9
SLIRP-201ENST00000238688 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.44□□□□□ -0.9
SLIRP-201ENST00000238688 PAPPA-AS1Q5QFB9 102 aa9.44□□□□□ -0.9
SLIRP-201ENST00000238688 TM2D3Q9BRN9 247 aa9.44□□□□□ -0.9
SLIRP-201ENST00000238688 TENM2Q9NT68 2774 aa9.44□□□□□ -0.9
SLIRP-201ENST00000238688 TRAV9-2A0A087WT02 112 aa9.43□□□□□ -0.9
SLIRP-201ENST00000238688 TRAV12-1A0A0B4J245 112 aa9.43□□□□□ -0.9
SLIRP-201ENST00000238688 TRBV6-4A0A1B0GX49 114 aa9.43□□□□□ -0.9
SLIRP-201ENST00000238688 HSBP1L1C9JCN9 74 aa9.43□□□□□ -0.9
SLIRP-201ENST00000238688 CRYBA4P53673 196 aa9.43□□□□□ -0.9
SLIRP-201ENST00000238688 SMAGPQ0VAQ4 97 aa9.43□□□□□ -0.9
SLIRP-201ENST00000238688 ERASQ7Z444 233 aa9.43□□□□□ -0.9
SLIRP-201ENST00000238688 TMEM141Q96I45 108 aa9.43□□□□□ -0.9
SLIRP-201ENST00000238688 TIMM17AQ99595 171 aa9.43□□□□□ -0.9
SLIRP-201ENST00000238688 NOP10Q9NPE3 64 aaKnown RBP9.43□□□□□ -0.9
SLIRP-201ENST00000238688 SACSQ9NZJ4 4579 aa9.43□□□□□ -0.9
SLIRP-201ENST00000238688 RYR2Q92736 4967 aa9.42□□□□□ -0.9
SLIRP-201ENST00000238688 C3orf84H3BNL1 204 aa9.42□□□□□ -0.9
SLIRP-201ENST00000238688 C2orf66Q6UXQ4 117 aa9.42□□□□□ -0.9
SLIRP-201ENST00000238688 ZMAT4Q9H898 229 aa9.42□□□□□ -0.9
SLIRP-201ENST00000238688 X6R8D5 127 aa9.42□□□□□ -0.9
SLIRP-201ENST00000238688 TRGV2A0A075B6R0 118 aa9.41□□□□□ -0.9
SLIRP-201ENST00000238688 K7EQD1 137 aa9.41□□□□□ -0.9
SLIRP-201ENST00000238688 RPL36AP83881 106 aaKnown RBP9.41□□□□□ -0.9
SLIRP-201ENST00000238688 Q6ZTI0 123 aa9.41□□□□□ -0.9
SLIRP-201ENST00000238688 DAZ4Q86SG3 579 aaKnown RBP9.41□□□□□ -0.9
SLIRP-201ENST00000238688 RPL36ALQ969Q0 106 aaKnown RBP9.41□□□□□ -0.9
SLIRP-201ENST00000238688 RNF183Q96D59 192 aa9.41□□□□□ -0.9
SLIRP-201ENST00000238688 DAZ3Q9NR90 486 aaKnown RBP9.41□□□□□ -0.9
SLIRP-201ENST00000238688 LYSTQ99698 3801 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms