RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 MRPL35Q9NZE8 188 aaKnown RBP12.84□□□□□ -0.35
GCDH-201ENST00000222214 UFSP1Q6NVU6 142 aa12.83□□□□□ -0.35
GCDH-201ENST00000222214 C12orf54Q6X4T0 127 aa12.83□□□□□ -0.35
GCDH-201ENST00000222214 BOD1L2Q8IYS8 172 aa12.83□□□□□ -0.35
GCDH-201ENST00000222214 NEXN-AS1Q8NBZ9 246 aa12.83□□□□□ -0.35
GCDH-201ENST00000222214 CUBNO60494 3623 aa12.83□□□□□ -0.36
GCDH-201ENST00000222214 I3L3M4 83 aa12.83□□□□□ -0.36
GCDH-201ENST00000222214 KRTAP10-3P60369 221 aa12.83□□□□□ -0.36
GCDH-201ENST00000222214 NEGR1Q7Z3B1 354 aa12.83□□□□□ -0.36
GCDH-201ENST00000222214 C1orf158Q8N1D5 194 aa12.83□□□□□ -0.36
GCDH-201ENST00000222214 TMEM141Q96I45 108 aa12.83□□□□□ -0.36
GCDH-201ENST00000222214 SIVA1O15304 175 aa12.82□□□□□ -0.36
GCDH-201ENST00000222214 FGF6P10767 208 aa12.82□□□□□ -0.36
GCDH-201ENST00000222214 TIMM17AQ99595 171 aa12.82□□□□□ -0.36
GCDH-201ENST00000222214 C1QTNF4Q9BXJ3 329 aa12.82□□□□□ -0.36
GCDH-201ENST00000222214 LINC00482Q8N8I6 264 aa12.81□□□□□ -0.36
GCDH-201ENST00000222214 BAALCQ8WXS3 180 aa12.81□□□□□ -0.36
GCDH-201ENST00000222214 C19orf73Q9NVV2 129 aa12.81□□□□□ -0.36
GCDH-201ENST00000222214 TP53TG1Q9Y2A0 90 aa12.81□□□□□ -0.36
GCDH-201ENST00000222214 CHTOPQ9Y3Y2 248 aaKnown RBP12.81□□□□□ -0.36
GCDH-201ENST00000222214 CRLF1O75462 422 aa12.81□□□□□ -0.36
GCDH-201ENST00000222214 HINT1P49773 126 aaPredicted RBP12.81□□□□□ -0.36
GCDH-201ENST00000222214 CFAP126Q5VTH2 177 aa12.81□□□□□ -0.36
GCDH-201ENST00000222214 ZC2HC1BQ5TFG8 222 aa12.8□□□□□ -0.36
GCDH-201ENST00000222214 IL17DQ8TAD2 202 aa12.8□□□□□ -0.36
GCDH-201ENST00000222214 TMEM263Q8WUH6 116 aaKnown RBP12.8□□□□□ -0.36
GCDH-201ENST00000222214 IGIPA6NJ69 53 aa12.8□□□□□ -0.36
GCDH-201ENST00000222214 RS1O15537 224 aa12.8□□□□□ -0.36
GCDH-201ENST00000222214 NMUP48645 174 aa12.8□□□□□ -0.36
GCDH-201ENST00000222214 INSL3P51460 131 aa12.8□□□□□ -0.36
GCDH-201ENST00000222214 ZMAT5Q9UDW3 170 aaKnown RBP12.8□□□□□ -0.36
GCDH-201ENST00000222214 PRM2P04554 102 aa12.79□□□□□ -0.36
GCDH-201ENST00000222214 RNASE8Q8TDE3 154 aaKnown RBP12.79□□□□□ -0.36
GCDH-201ENST00000222214 DNAJC30Q96LL9 226 aa12.79□□□□□ -0.36
GCDH-201ENST00000222214 PAPPA-AS1Q5QFB9 102 aa12.78□□□□□ -0.36
GCDH-201ENST00000222214 C2orf91Q6ZV80 131 aa12.78□□□□□ -0.36
GCDH-201ENST00000222214 TNFRSF18Q9Y5U5 241 aa12.78□□□□□ -0.36
GCDH-201ENST00000222214 NOTCH2Q04721 2471 aa12.78□□□□□ -0.36
GCDH-201ENST00000222214 IGHV3-53P01767 116 aa12.78□□□□□ -0.36
GCDH-201ENST00000222214 MPV17L2Q567V2 206 aa12.78□□□□□ -0.36
GCDH-201ENST00000222214 MRPL16Q9NX20 251 aaKnown RBP12.78□□□□□ -0.36
GCDH-201ENST00000222214 TP73-AS1Q9UF72 201 aa12.78□□□□□ -0.36
GCDH-201ENST00000222214 IGHV3OR16-12A0A075B7B8 117 aa12.77□□□□□ -0.37
GCDH-201ENST00000222214 PRSS29PA6NIE9 313 aa12.77□□□□□ -0.37
GCDH-201ENST00000222214 TSHBP01222 138 aa12.77□□□□□ -0.37
GCDH-201ENST00000222214 AZU1P20160 251 aa12.77□□□□□ -0.37
GCDH-201ENST00000222214 OTOGQ6ZRI0 2925 aa12.77□□□□□ -0.37
GCDH-201ENST00000222214 PMVKQ15126 192 aa12.76□□□□□ -0.37
GCDH-201ENST00000222214 SETD2Q9BYW2 2564 aaPredicted RBP12.76□□□□□ -0.37
GCDH-201ENST00000222214 IGHV3-73A0A0B4J1V6 119 aa12.76□□□□□ -0.37
GCDH-201ENST00000222214 TMEM97Q5BJF2 176 aa12.76□□□□□ -0.37
GCDH-201ENST00000222214 GTSCR1Q86UQ5 136 aa12.76□□□□□ -0.37
GCDH-201ENST00000222214 C20orf203Q8NBC4 194 aa12.76□□□□□ -0.37
GCDH-201ENST00000222214 GIG44P09565 113 aaPredicted RBP12.75□□□□□ -0.37
GCDH-201ENST00000222214 RPL39P62891 51 aaKnown RBP12.75□□□□□ -0.37
GCDH-201ENST00000222214 BVES-AS1Q5T3Y7 98 aa12.75□□□□□ -0.37
GCDH-201ENST00000222214 C16orf74Q96GX8 76 aa12.75□□□□□ -0.37
GCDH-201ENST00000222214 SETXQ7Z333 2677 aaKnown RBP12.75□□□□□ -0.37
GCDH-201ENST00000222214 DAZ2Q13117 558 aaKnown RBP12.74□□□□□ -0.37
GCDH-201ENST00000222214 C9orf66Q5T8R8 295 aa12.74□□□□□ -0.37
GCDH-201ENST00000222214 PCP2Q8IVA1 136 aa12.74□□□□□ -0.37
GCDH-201ENST00000222214 NACAE9PAV3 2078 aa12.74□□□□□ -0.37
GCDH-201ENST00000222214 IGKV2D-26A0A0A0MRZ7 120 aa12.73□□□□□ -0.37
GCDH-201ENST00000222214 P0DMU3 169 aa12.73□□□□□ -0.37
GCDH-201ENST00000222214 FAM231AP0DMU4 169 aa12.73□□□□□ -0.37
GCDH-201ENST00000222214 FAM231CP0DMU5 169 aa12.73□□□□□ -0.37
GCDH-201ENST00000222214 RPL35AP18077 110 aaKnown RBP12.73□□□□□ -0.37
GCDH-201ENST00000222214 OR4C5Q8NGB2 326 aa12.73□□□□□ -0.37
GCDH-201ENST00000222214 WFDC10AQ9H1F0 79 aa12.73□□□□□ -0.37
GCDH-201ENST00000222214 HIGD1BQ9P298 99 aa12.73□□□□□ -0.37
GCDH-201ENST00000222214 TRGV1A0A0A0MS02 117 aa12.72□□□□□ -0.37
GCDH-201ENST00000222214 NPSP0C0P6 89 aa12.72□□□□□ -0.37
GCDH-201ENST00000222214 TCTAP57738 103 aa12.72□□□□□ -0.37
GCDH-201ENST00000222214 CST9LQ9H4G1 147 aa12.72□□□□□ -0.37
GCDH-201ENST00000222214 CIDEAO60543 219 aa12.72□□□□□ -0.37
GCDH-201ENST00000222214 HSD52Q0P140 79 aa12.72□□□□□ -0.37
GCDH-201ENST00000222214 CSNK1G2-AS1Q8NCQ2 148 aa12.72□□□□□ -0.37
GCDH-201ENST00000222214 PYGO1Q9Y3Y4 419 aa12.72□□□□□ -0.37
GCDH-201ENST00000222214 TRAV4A0A0B4J268 109 aa12.71□□□□□ -0.37
GCDH-201ENST00000222214 SEC11AP67812 179 aa12.71□□□□□ -0.37
GCDH-201ENST00000222214 NSD1Q96L73 2696 aaPredicted RBP12.71□□□□□ -0.38
GCDH-201ENST00000222214 Q6ZSN1 163 aa12.7□□□□□ -0.38
GCDH-201ENST00000222214 LINC00469Q8N7U9 141 aa12.7□□□□□ -0.38
GCDH-201ENST00000222214 CITED1Q99966 193 aa12.7□□□□□ -0.38
GCDH-201ENST00000222214 CRYBA4P53673 196 aa12.7□□□□□ -0.38
GCDH-201ENST00000222214 RRN3P1Q2M238 152 aa12.7□□□□□ -0.38
GCDH-201ENST00000222214 TRBV10-1A0A0K0K1A3 114 aa12.69□□□□□ -0.38
GCDH-201ENST00000222214 E9PLD3 99 aa12.69□□□□□ -0.38
GCDH-201ENST00000222214 OR11H2Q8NH07 326 aa12.69□□□□□ -0.38
GCDH-201ENST00000222214 DEFB104AQ8WTQ1 72 aa12.69□□□□□ -0.38
GCDH-201ENST00000222214 HERVK_113P61574 105 aa12.69□□□□□ -0.38
GCDH-201ENST00000222214 FN1P02751 2386 aaKnown RBP12.68□□□□□ -0.38
GCDH-201ENST00000222214 C2CD3Q4AC94 2353 aa12.68□□□□□ -0.38
GCDH-201ENST00000222214 IGLV4-69A0A075B6H9 119 aa12.68□□□□□ -0.38
GCDH-201ENST00000222214 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.68□□□□□ -0.38
GCDH-201ENST00000222214 OVOL2Q9BRP0 275 aa12.68□□□□□ -0.38
GCDH-201ENST00000222214 Q6ZTI0 123 aa12.67□□□□□ -0.38
GCDH-201ENST00000222214 NOP10Q9NPE3 64 aaKnown RBP12.67□□□□□ -0.38
GCDH-201ENST00000222214 TRBV25-1A0A075B6N4 114 aa12.67□□□□□ -0.38
GCDH-201ENST00000222214 TRAV8-6A0A0B4J262 113 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms