RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 Q6ZSR3 168 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 LENEPQ9Y5L5 61 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 LGALS9O00182 355 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 NDUFA12Q9UI09 145 aa10.43□□□□□ -0.74
SIX4-201ENST00000216513 WDR87Q6ZQQ6 2873 aa10.42□□□□□ -0.74
SIX4-201ENST00000216513 A0A0J9YWU9 116 aa10.42□□□□□ -0.74
SIX4-201ENST00000216513 DAZ2Q13117 558 aaKnown RBP10.42□□□□□ -0.74
SIX4-201ENST00000216513 UBE2V1Q13404 147 aa10.42□□□□□ -0.74
SIX4-201ENST00000216513 DAZ4Q86SG3 579 aaKnown RBP10.42□□□□□ -0.74
SIX4-201ENST00000216513 DAZ3Q9NR90 486 aaKnown RBP10.42□□□□□ -0.74
SIX4-201ENST00000216513 RPL39P62891 51 aaKnown RBP10.42□□□□□ -0.74
SIX4-201ENST00000216513 HERVK_113P63121 156 aa10.42□□□□□ -0.74
SIX4-201ENST00000216513 ZNF462Q96JM2 2506 aa10.42□□□□□ -0.74
SIX4-201ENST00000216513 FGF6P10767 208 aa10.42□□□□□ -0.74
SIX4-201ENST00000216513 PCNX3Q9H6A9 2034 aa10.42□□□□□ -0.74
SIX4-201ENST00000216513 H3BMG7 143 aa10.41□□□□□ -0.74
SIX4-201ENST00000216513 FSTL3O95633 263 aa10.41□□□□□ -0.74
SIX4-201ENST00000216513 PATE2Q6UY27 113 aa10.41□□□□□ -0.74
SIX4-201ENST00000216513 A8MWP6 167 aa10.41□□□□□ -0.74
SIX4-201ENST00000216513 NCOA6Q14686 2063 aaPredicted RBP10.41□□□□□ -0.74
SIX4-201ENST00000216513 MIFP14174 115 aa10.41□□□□□ -0.74
SIX4-201ENST00000216513 NANOS2P60321 138 aaKnown RBP10.41□□□□□ -0.74
SIX4-201ENST00000216513 RBMY1FQ15415 496 aaKnown RBP10.41□□□□□ -0.74
SIX4-201ENST00000216513 SOCS3O14543 225 aa10.4□□□□□ -0.74
SIX4-201ENST00000216513 IGHV4-30-4P0DP06 118 aa10.4□□□□□ -0.74
SIX4-201ENST00000216513 Q6ZTI0 123 aa10.4□□□□□ -0.74
SIX4-201ENST00000216513 RETNQ9HD89 108 aa10.4□□□□□ -0.74
SIX4-201ENST00000216513 OPRPNQ99935 248 aaPredicted RBP10.4□□□□□ -0.74
SIX4-201ENST00000216513 JMJD1CQ15652 2540 aa10.4□□□□□ -0.74
SIX4-201ENST00000216513 TRBV7-3A0A075B6L6 115 aa10.4□□□□□ -0.75
SIX4-201ENST00000216513 P0DMU3 169 aa10.4□□□□□ -0.75
SIX4-201ENST00000216513 FAM231AP0DMU4 169 aa10.4□□□□□ -0.75
SIX4-201ENST00000216513 FAM231CP0DMU5 169 aa10.4□□□□□ -0.75
SIX4-201ENST00000216513 MDFICQ9P1T7 246 aa10.4□□□□□ -0.75
SIX4-201ENST00000216513 NUP210LQ5VU65 1888 aa10.39□□□□□ -0.75
SIX4-201ENST00000216513 CEMP1Q6PRD7 247 aaPredicted RBP10.39□□□□□ -0.75
SIX4-201ENST00000216513 hADV29S1A0JD25 119 aa10.39□□□□□ -0.75
SIX4-201ENST00000216513 LTAP01374 205 aa10.39□□□□□ -0.75
SIX4-201ENST00000216513 IGLV2-14P01704 120 aa10.39□□□□□ -0.75
SIX4-201ENST00000216513 COX11Q9Y6N1 276 aa10.39□□□□□ -0.75
SIX4-201ENST00000216513 U3KQK5 164 aa10.39□□□□□ -0.75
SIX4-201ENST00000216513 LYRM9A8MSI8 78 aa10.39□□□□□ -0.75
SIX4-201ENST00000216513 PSMB8P28062 276 aa10.39□□□□□ -0.75
SIX4-201ENST00000216513 C14orf177Q52M58 125 aa10.39□□□□□ -0.75
SIX4-201ENST00000216513 DSCAML1Q8TD84 2053 aa10.39□□□□□ -0.75
SIX4-201ENST00000216513 SMIM9A6NGZ8 99 aa10.39□□□□□ -0.75
SIX4-201ENST00000216513 OVOL2Q9BRP0 275 aa10.39□□□□□ -0.75
SIX4-201ENST00000216513 ETDCA0A1B0GVM5 59 aa10.38□□□□□ -0.75
SIX4-201ENST00000216513 C10orf142B7Z368 130 aa10.38□□□□□ -0.75
SIX4-201ENST00000216513 NDUFS5O43920 106 aa10.38□□□□□ -0.75
SIX4-201ENST00000216513 Q0VG73 95 aa10.38□□□□□ -0.75
SIX4-201ENST00000216513 SMIM2Q9BVW6 85 aa10.38□□□□□ -0.75
SIX4-201ENST00000216513 C1orf229Q6ZS94 237 aaPredicted RBP10.38□□□□□ -0.75
SIX4-201ENST00000216513 TP73-AS1Q9UF72 201 aa10.38□□□□□ -0.75
SIX4-201ENST00000216513 HIGD2BQ4VC39 106 aa10.38□□□□□ -0.75
SIX4-201ENST00000216513 TP53TG3Q9ULZ0 132 aa10.38□□□□□ -0.75
SIX4-201ENST00000216513 DNAH12Q6ZR08 3092 aa10.37□□□□□ -0.75
SIX4-201ENST00000216513 ETDBQ3ZM63 59 aa10.37□□□□□ -0.75
SIX4-201ENST00000216513 LRP4O75096 1905 aa10.37□□□□□ -0.75
SIX4-201ENST00000216513 C20orf144Q9BQM9 153 aa10.37□□□□□ -0.75
SIX4-201ENST00000216513 TRAV4A0A0B4J268 109 aa10.36□□□□□ -0.75
SIX4-201ENST00000216513 LY6LH3BQJ8 138 aa10.36□□□□□ -0.75
SIX4-201ENST00000216513 CT83Q5H943 113 aa10.36□□□□□ -0.75
SIX4-201ENST00000216513 NCR3O14931 201 aa10.36□□□□□ -0.75
SIX4-201ENST00000216513 C9orf47Q6ZRZ4 202 aa10.35□□□□□ -0.75
SIX4-201ENST00000216513 CCL25O15444 150 aa10.35□□□□□ -0.75
SIX4-201ENST00000216513 BOD1L2Q8IYS8 172 aa10.35□□□□□ -0.75
SIX4-201ENST00000216513 Q9H8V8 135 aa10.35□□□□□ -0.75
SIX4-201ENST00000216513 KIAA1549Q9HCM3 1950 aa10.35□□□□□ -0.75
SIX4-201ENST00000216513 LECT2O14960 151 aa10.35□□□□□ -0.75
SIX4-201ENST00000216513 NDUFA1O15239 70 aa10.35□□□□□ -0.75
SIX4-201ENST00000216513 PRM2P04554 102 aa10.35□□□□□ -0.75
SIX4-201ENST00000216513 IGLC2P0DOY2 106 aa10.35□□□□□ -0.75
SIX4-201ENST00000216513 IGLC3P0DOY3 106 aa10.35□□□□□ -0.75
SIX4-201ENST00000216513 FAM231DQ6ZW35 169 aa10.35□□□□□ -0.75
SIX4-201ENST00000216513 FASNP49327 2511 aaKnown RBP10.35□□□□□ -0.75
SIX4-201ENST00000216513 TLN1Q9Y490 2541 aaKnown RBP10.35□□□□□ -0.75
SIX4-201ENST00000216513 BVES-AS1Q5T3Y7 98 aa10.34□□□□□ -0.75
SIX4-201ENST00000216513 DSCR8Q96T75 97 aa10.34□□□□□ -0.75
SIX4-201ENST00000216513 J3QQQ9 107 aa10.34□□□□□ -0.75
SIX4-201ENST00000216513 C9orf153Q5TBE3 101 aa10.34□□□□□ -0.75
SIX4-201ENST00000216513 ZFYVE26Q68DK2 2539 aa10.34□□□□□ -0.75
SIX4-201ENST00000216513 BRI3O95415 125 aa10.34□□□□□ -0.75
SIX4-201ENST00000216513 K7EQG2 157 aa10.34□□□□□ -0.75
SIX4-201ENST00000216513 GAGE12HA6NDE8 117 aa10.34□□□□□ -0.75
SIX4-201ENST00000216513 NUPR2A6NF83 97 aa10.34□□□□□ -0.75
SIX4-201ENST00000216513 CEND1Q8N111 149 aa10.34□□□□□ -0.75
SIX4-201ENST00000216513 LYPD6BQ8NI32 183 aa10.33□□□□□ -0.76
SIX4-201ENST00000216513 CEP295Q9C0D2 2601 aa10.33□□□□□ -0.76
SIX4-201ENST00000216513 CARD19Q96LW7 228 aa10.33□□□□□ -0.76
SIX4-201ENST00000216513 C20orf78Q9BR46 151 aa10.33□□□□□ -0.76
SIX4-201ENST00000216513 TNRC6BQ9UPQ9 1833 aaKnown RBP10.33□□□□□ -0.76
SIX4-201ENST00000216513 ANKRD11Q6UB99 2663 aaPredicted RBP10.33□□□□□ -0.76
SIX4-201ENST00000216513 G3V4G9 280 aa10.33□□□□□ -0.76
SIX4-201ENST00000216513 ZNF747Q9BV97 191 aa10.33□□□□□ -0.76
SIX4-201ENST00000216513 SIVA1O15304 175 aa10.33□□□□□ -0.76
SIX4-201ENST00000216513 EBI3Q14213 229 aa10.33□□□□□ -0.76
SIX4-201ENST00000216513 Q6ZPA2 131 aa10.32□□□□□ -0.76
SIX4-201ENST00000216513 F8VRH5 84 aa10.32□□□□□ -0.76
SIX4-201ENST00000216513 UBL5Q9BZL1 73 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms