RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 NEGR1Q7Z3B1 354 aa11.23□□□□□ -0.61
LAPTM4A-201ENST00000175091 PAM16Q9Y3D7 125 aa11.23□□□□□ -0.61
LAPTM4A-201ENST00000175091 TRGV1A0A0A0MS02 117 aa11.22□□□□□ -0.61
LAPTM4A-201ENST00000175091 H0Y8G0 127 aa11.22□□□□□ -0.61
LAPTM4A-201ENST00000175091 C12orf54Q6X4T0 127 aa11.22□□□□□ -0.61
LAPTM4A-201ENST00000175091 ZFP2Q6ZN57 461 aa11.22□□□□□ -0.61
LAPTM4A-201ENST00000175091 ATOH7Q8N100 152 aa11.22□□□□□ -0.61
LAPTM4A-201ENST00000175091 C18orf15Q96N68 181 aa11.22□□□□□ -0.61
LAPTM4A-201ENST00000175091 VCYO14598 125 aa11.21□□□□□ -0.61
LAPTM4A-201ENST00000175091 NUDT3O95989 172 aa11.21□□□□□ -0.61
LAPTM4A-201ENST00000175091 Q6ZTI0 123 aa11.21□□□□□ -0.61
LAPTM4A-201ENST00000175091 ANK2Q01484 3957 aa11.2□□□□□ -0.62
LAPTM4A-201ENST00000175091 IGHV3-53P01767 116 aa11.2□□□□□ -0.62
LAPTM4A-201ENST00000175091 LGALS9CQ6DKI2 356 aa11.2□□□□□ -0.62
LAPTM4A-201ENST00000175091 KIR2DL5BQ8NHK3 375 aa11.2□□□□□ -0.62
LAPTM4A-201ENST00000175091 KIR2DL4Q99706 377 aa11.2□□□□□ -0.62
LAPTM4A-201ENST00000175091 NOP10Q9NPE3 64 aaKnown RBP11.2□□□□□ -0.62
LAPTM4A-201ENST00000175091 LINC00587B1AMM8 73 aa11.19□□□□□ -0.62
LAPTM4A-201ENST00000175091 ATP5LO75964 103 aa11.19□□□□□ -0.62
LAPTM4A-201ENST00000175091 Q6ZSN1 163 aa11.19□□□□□ -0.62
LAPTM4A-201ENST00000175091 TOMM6Q96B49 74 aa11.19□□□□□ -0.62
LAPTM4A-201ENST00000175091 OVOL2Q9BRP0 275 aa11.19□□□□□ -0.62
LAPTM4A-201ENST00000175091 PKD1L1Q8TDX9 2849 aa11.19□□□□□ -0.62
LAPTM4A-201ENST00000175091 COL6A5A8TX70 2615 aa11.19□□□□□ -0.62
LAPTM4A-201ENST00000175091 TRAV4A0A0B4J268 109 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 P0DMU3 169 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 FAM231AP0DMU4 169 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 FAM231CP0DMU5 169 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 SPATA45Q537H7 98 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 TRAV9-2A0A087WT02 112 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 DDTP30046 118 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 APOC4P55056 127 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 RIPPLY3P57055 190 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 MAJINQ3KP22 176 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 C2orf66Q6UXQ4 117 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 OR4C5Q8NGB2 326 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 PMCHL2Q9BQD1 86 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 X6R8D5 127 aa11.18□□□□□ -0.62
LAPTM4A-201ENST00000175091 OXLD1Q5BKU9 147 aa11.17□□□□□ -0.62
LAPTM4A-201ENST00000175091 ZNF479Q96JC4 524 aa11.17□□□□□ -0.62
LAPTM4A-201ENST00000175091 NEXN-AS1Q8NBZ9 246 aa11.16□□□□□ -0.62
LAPTM4A-201ENST00000175091 I3L3M4 83 aa11.16□□□□□ -0.62
LAPTM4A-201ENST00000175091 TSHBP01222 138 aa11.16□□□□□ -0.62
LAPTM4A-201ENST00000175091 EGFEM1PQ0D2K5 195 aa11.16□□□□□ -0.62
LAPTM4A-201ENST00000175091 RHOHQ15669 191 aa11.16□□□□□ -0.62
LAPTM4A-201ENST00000175091 Q9UF83 564 aa11.16□□□□□ -0.62
LAPTM4A-201ENST00000175091 CYSLTR1Q9Y271 337 aa11.16□□□□□ -0.62
LAPTM4A-201ENST00000175091 DNAH3Q8TD57 4116 aa11.15□□□□□ -0.62
LAPTM4A-201ENST00000175091 SMIM9A6NGZ8 99 aa11.15□□□□□ -0.62
LAPTM4A-201ENST00000175091 LINC01549A6NIU2 74 aa11.15□□□□□ -0.62
LAPTM4A-201ENST00000175091 IGHV4-30-4P0DP06 118 aa11.15□□□□□ -0.62
LAPTM4A-201ENST00000175091 G0S2P27469 103 aa11.15□□□□□ -0.62
LAPTM4A-201ENST00000175091 ODF1Q14990 250 aa11.15□□□□□ -0.62
LAPTM4A-201ENST00000175091 DNAJC30Q96LL9 226 aa11.15□□□□□ -0.62
LAPTM4A-201ENST00000175091 TP53TG1Q9Y2A0 90 aa11.15□□□□□ -0.62
LAPTM4A-201ENST00000175091 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.14□□□□□ -0.63
LAPTM4A-201ENST00000175091 DEFB135Q30KP9 77 aa11.14□□□□□ -0.63
LAPTM4A-201ENST00000175091 DEFB104AQ8WTQ1 72 aa11.14□□□□□ -0.63
LAPTM4A-201ENST00000175091 SCGB3A1Q96QR1 104 aa11.14□□□□□ -0.63
LAPTM4A-201ENST00000175091 TNFRSF18Q9Y5U5 241 aa11.14□□□□□ -0.63
LAPTM4A-201ENST00000175091 hDV102S1A0JD36 115 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 GAGE12BA1L429 117 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 GAGE7O76087 117 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 PRSS1P07477 247 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 GAGE12FP0CL80 117 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 GAGE12GP0CL81 117 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 GAGE12IP0CL82 117 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 ERASQ7Z444 233 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 NBEAL2Q6ZNJ1 2754 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 K7EQD1 137 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 KRTAP10-11P60412 298 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 LINC00612Q8N6U2 182 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 ZMAT4Q9H898 229 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 DKK2Q9UBU2 259 aa11.13□□□□□ -0.63
LAPTM4A-201ENST00000175091 TRGV2A0A075B6R0 118 aa11.12□□□□□ -0.63
LAPTM4A-201ENST00000175091 CIDEAO60543 219 aa11.12□□□□□ -0.63
LAPTM4A-201ENST00000175091 IGLC3P0DOY3 106 aa11.12□□□□□ -0.63
LAPTM4A-201ENST00000175091 RPL39P62891 51 aaKnown RBP11.12□□□□□ -0.63
LAPTM4A-201ENST00000175091 TRAV12-1A0A0B4J245 112 aa11.11□□□□□ -0.63
LAPTM4A-201ENST00000175091 TRBV10-1A0A0K0K1A3 114 aa11.11□□□□□ -0.63
LAPTM4A-201ENST00000175091 Q6ZN92 141 aa11.11□□□□□ -0.63
LAPTM4A-201ENST00000175091 IGIPA6NJ69 53 aa11.11□□□□□ -0.63
LAPTM4A-201ENST00000175091 HSBP1L1C9JCN9 74 aa11.11□□□□□ -0.63
LAPTM4A-201ENST00000175091 EMP1P54849 157 aa11.11□□□□□ -0.63
LAPTM4A-201ENST00000175091 C20orf203Q8NBC4 194 aa11.11□□□□□ -0.63
LAPTM4A-201ENST00000175091 BAALCQ8WXS3 180 aa11.11□□□□□ -0.63
LAPTM4A-201ENST00000175091 TIMM17AQ99595 171 aa11.11□□□□□ -0.63
LAPTM4A-201ENST00000175091 MIEN1Q9BRT3 115 aa11.11□□□□□ -0.63
LAPTM4A-201ENST00000175091 A0A087WX48 190 aa11.1□□□□□ -0.63
LAPTM4A-201ENST00000175091 SLC25A29Q8N8R3 303 aa11.1□□□□□ -0.63
LAPTM4A-201ENST00000175091 TRBV7-3A0A075B6L6 115 aa11.08□□□□□ -0.64
LAPTM4A-201ENST00000175091 OR11H2Q8NH07 326 aa11.08□□□□□ -0.64
LAPTM4A-201ENST00000175091 TMEM141Q96I45 108 aa11.08□□□□□ -0.64
LAPTM4A-201ENST00000175091 MRPL35Q9NZE8 188 aaKnown RBP11.08□□□□□ -0.64
LAPTM4A-201ENST00000175091 UQCR10Q9UDW1 63 aa11.08□□□□□ -0.64
LAPTM4A-201ENST00000175091 TRBV6-4A0A1B0GX49 114 aa11.08□□□□□ -0.64
LAPTM4A-201ENST00000175091 A8MZ25 164 aa11.08□□□□□ -0.64
LAPTM4A-201ENST00000175091 IGKCP01834 107 aa11.08□□□□□ -0.64
LAPTM4A-201ENST00000175091 ZMAT5Q9UDW3 170 aaKnown RBP11.08□□□□□ -0.64
LAPTM4A-201ENST00000175091 F8VRH5 84 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms