RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SMIM17P0DL12 118 aa14.27□□□□□ -0.12
TNFRSF1A-201ENST00000162749 MORN3Q6PF18 240 aaPredicted RBP14.27□□□□□ -0.12
TNFRSF1A-201ENST00000162749 SHISA2Q6UWI4 295 aa14.27□□□□□ -0.12
TNFRSF1A-201ENST00000162749 ORAOV1Q8WV07 137 aa14.27□□□□□ -0.12
TNFRSF1A-201ENST00000162749 AZU1P20160 251 aa14.27□□□□□ -0.13
TNFRSF1A-201ENST00000162749 PTTG1IPP53801 180 aa14.27□□□□□ -0.13
TNFRSF1A-201ENST00000162749 C12orf54Q6X4T0 127 aa14.27□□□□□ -0.13
TNFRSF1A-201ENST00000162749 POM121L12Q8N7R1 296 aa14.27□□□□□ -0.13
TNFRSF1A-201ENST00000162749 CSNK1G2-AS1Q8NCQ2 148 aa14.27□□□□□ -0.13
TNFRSF1A-201ENST00000162749 C1QTNF4Q9BXJ3 329 aa14.27□□□□□ -0.13
TNFRSF1A-201ENST00000162749 ANK2Q01484 3957 aa14.27□□□□□ -0.13
TNFRSF1A-201ENST00000162749 RBX1P62877 108 aa14.26□□□□□ -0.13
TNFRSF1A-201ENST00000162749 RNASE8Q8TDE3 154 aaKnown RBP14.26□□□□□ -0.13
TNFRSF1A-201ENST00000162749 TMEM158Q8WZ71 300 aa14.26□□□□□ -0.13
TNFRSF1A-201ENST00000162749 C18orf15Q96N68 181 aa14.26□□□□□ -0.13
TNFRSF1A-201ENST00000162749 COTL1Q14019 142 aa14.26□□□□□ -0.13
TNFRSF1A-201ENST00000162749 CCL25O15444 150 aa14.25□□□□□ -0.13
TNFRSF1A-201ENST00000162749 FAM74A4Q5TZK3 123 aa14.25□□□□□ -0.13
TNFRSF1A-201ENST00000162749 M0R2P5 195 aa14.25□□□□□ -0.13
TNFRSF1A-201ENST00000162749 CRYGDP07320 174 aa14.25□□□□□ -0.13
TNFRSF1A-201ENST00000162749 COX8AP10176 69 aa14.25□□□□□ -0.13
TNFRSF1A-201ENST00000162749 RASL10AQ92737 203 aa14.25□□□□□ -0.13
TNFRSF1A-201ENST00000162749 MPV17L2Q567V2 206 aa14.23□□□□□ -0.13
TNFRSF1A-201ENST00000162749 DKK2Q9UBU2 259 aa14.23□□□□□ -0.13
TNFRSF1A-201ENST00000162749 TMEM263Q8WUH6 116 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-201ENST00000162749 RPL39LQ96EH5 51 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-201ENST00000162749 CSTL1Q9H114 145 aa14.22□□□□□ -0.13
TNFRSF1A-201ENST00000162749 NOTCH1P46531 2555 aa14.22□□□□□ -0.13
TNFRSF1A-201ENST00000162749 PIK3CD-AS1Q5SR53 167 aa14.22□□□□□ -0.13
TNFRSF1A-201ENST00000162749 SUMO4Q6EEV6 95 aa14.22□□□□□ -0.13
TNFRSF1A-201ENST00000162749 PTH2Q96A98 100 aa14.22□□□□□ -0.13
TNFRSF1A-201ENST00000162749 SPXQ9BT56 116 aa14.22□□□□□ -0.13
TNFRSF1A-201ENST00000162749 FGF6P10767 208 aa14.21□□□□□ -0.13
TNFRSF1A-201ENST00000162749 C2orf91Q6ZV80 131 aa14.21□□□□□ -0.13
TNFRSF1A-201ENST00000162749 IL17DQ8TAD2 202 aa14.21□□□□□ -0.13
TNFRSF1A-201ENST00000162749 F5H697 171 aa14.21□□□□□ -0.14
TNFRSF1A-201ENST00000162749 NUDT3O95989 172 aa14.21□□□□□ -0.14
TNFRSF1A-201ENST00000162749 LAGE3Q14657 143 aa14.21□□□□□ -0.14
TNFRSF1A-201ENST00000162749 Q6ZVH6 145 aa14.21□□□□□ -0.14
TNFRSF1A-201ENST00000162749 UBE2V1Q13404 147 aa14.2□□□□□ -0.14
TNFRSF1A-201ENST00000162749 ODF1Q14990 250 aa14.2□□□□□ -0.14
TNFRSF1A-201ENST00000162749 K7EP13 123 aa14.19□□□□□ -0.14
TNFRSF1A-201ENST00000162749 SUMO2P61956 95 aaKnown RBP14.19□□□□□ -0.14
TNFRSF1A-201ENST00000162749 OXLD1Q5BKU9 147 aa14.19□□□□□ -0.14
TNFRSF1A-201ENST00000162749 MRPL16Q9NX20 251 aaKnown RBP14.19□□□□□ -0.14
TNFRSF1A-201ENST00000162749 COX11Q9Y6N1 276 aa14.19□□□□□ -0.14
TNFRSF1A-201ENST00000162749 NBEAL1Q6ZS30 2694 aa14.19□□□□□ -0.14
TNFRSF1A-201ENST00000162749 TCTAP57738 103 aa14.19□□□□□ -0.14
TNFRSF1A-201ENST00000162749 ZNF56Q15929 161 aa14.19□□□□□ -0.14
TNFRSF1A-201ENST00000162749 BVES-AS1Q5T3Y7 98 aa14.19□□□□□ -0.14
TNFRSF1A-201ENST00000162749 ZMAT4Q9H898 229 aa14.19□□□□□ -0.14
TNFRSF1A-201ENST00000162749 A8MWV9 139 aa14.18□□□□□ -0.14
TNFRSF1A-201ENST00000162749 C20orf78Q9BR46 151 aa14.18□□□□□ -0.14
TNFRSF1A-201ENST00000162749 SMIM2Q9BVW6 85 aa14.18□□□□□ -0.14
TNFRSF1A-201ENST00000162749 PPP1R17O96001 155 aa14.17□□□□□ -0.14
TNFRSF1A-201ENST00000162749 PRSS1P07477 247 aa14.17□□□□□ -0.14
TNFRSF1A-201ENST00000162749 PLAC8L1A1L4L8 177 aa14.17□□□□□ -0.14
TNFRSF1A-201ENST00000162749 M0QY20 66 aa14.17□□□□□ -0.14
TNFRSF1A-201ENST00000162749 UFSP1Q6NVU6 142 aa14.17□□□□□ -0.14
TNFRSF1A-201ENST00000162749 CFAP126Q5VTH2 177 aa14.16□□□□□ -0.14
TNFRSF1A-201ENST00000162749 BOD1L2Q8IYS8 172 aa14.16□□□□□ -0.14
TNFRSF1A-201ENST00000162749 C16orf74Q96GX8 76 aa14.16□□□□□ -0.14
TNFRSF1A-201ENST00000162749 HHLA3Q9XRX5 114 aa14.16□□□□□ -0.14
TNFRSF1A-201ENST00000162749 DNAH3Q8TD57 4116 aa14.16□□□□□ -0.14
TNFRSF1A-201ENST00000162749 RRN3P1Q2M238 152 aa14.15□□□□□ -0.14
TNFRSF1A-201ENST00000162749 IGHV3-73A0A0B4J1V6 119 aa14.15□□□□□ -0.14
TNFRSF1A-201ENST00000162749 ATP5LO75964 103 aa14.14□□□□□ -0.15
TNFRSF1A-201ENST00000162749 TRGV1A0A0A0MS02 117 aa14.14□□□□□ -0.15
TNFRSF1A-201ENST00000162749 DAZ2Q13117 558 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1A-201ENST00000162749 Q6ZTI0 123 aa14.13□□□□□ -0.15
TNFRSF1A-201ENST00000162749 OR4C5Q8NGB2 326 aa14.13□□□□□ -0.15
TNFRSF1A-201ENST00000162749 NOP10Q9NPE3 64 aaKnown RBP14.13□□□□□ -0.15
TNFRSF1A-201ENST00000162749 PCP2Q8IVA1 136 aa14.13□□□□□ -0.15
TNFRSF1A-201ENST00000162749 KIR2DL5BQ8NHK3 375 aa14.13□□□□□ -0.15
TNFRSF1A-201ENST00000162749 KRTAP10-11P60412 298 aa14.12□□□□□ -0.15
TNFRSF1A-201ENST00000162749 TRBV6-5A0A0K0K1A5 114 aa14.11□□□□□ -0.15
TNFRSF1A-201ENST00000162749 RS1O15537 224 aa14.11□□□□□ -0.15
TNFRSF1A-201ENST00000162749 IGKCP01834 107 aa14.11□□□□□ -0.15
TNFRSF1A-201ENST00000162749 POLR2KP53803 58 aaKnown RBP14.11□□□□□ -0.15
TNFRSF1A-201ENST00000162749 EGFEM1PQ0D2K5 195 aa14.11□□□□□ -0.15
TNFRSF1A-201ENST00000162749 EDA2RQ9HAV5 297 aa14.11□□□□□ -0.15
TNFRSF1A-201ENST00000162749 IGKV2D-26A0A0A0MRZ7 120 aa14.11□□□□□ -0.15
TNFRSF1A-201ENST00000162749 IGHV4-30-4P0DP06 118 aa14.11□□□□□ -0.15
TNFRSF1A-201ENST00000162749 NMUP48645 174 aa14.11□□□□□ -0.15
TNFRSF1A-201ENST00000162749 RNF151Q2KHN1 245 aa14.11□□□□□ -0.15
TNFRSF1A-201ENST00000162749 MGAM2Q2M2H8 2515 aa14.11□□□□□ -0.15
TNFRSF1A-201ENST00000162749 SDHAF1A6NFY7 115 aa14.1□□□□□ -0.15
TNFRSF1A-201ENST00000162749 RHODO00212 210 aa14.1□□□□□ -0.15
TNFRSF1A-201ENST00000162749 APOC4P55056 127 aa14.1□□□□□ -0.15
TNFRSF1A-201ENST00000162749 RPL32P62910 135 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1A-201ENST00000162749 ORMDL2Q53FV1 153 aa14.1□□□□□ -0.15
TNFRSF1A-201ENST00000162749 TAX1BP3O14907 124 aa14.1□□□□□ -0.15
TNFRSF1A-201ENST00000162749 Q6ZSN1 163 aa14.1□□□□□ -0.15
TNFRSF1A-201ENST00000162749 NEGR1Q7Z3B1 354 aa14.1□□□□□ -0.15
TNFRSF1A-201ENST00000162749 MRPL35Q9NZE8 188 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1A-201ENST00000162749 X6R8D5 127 aa14.1□□□□□ -0.15
TNFRSF1A-201ENST00000162749 DPM2O94777 84 aa14.09□□□□□ -0.15
TNFRSF1A-201ENST00000162749 TOMM6Q96B49 74 aa14.09□□□□□ -0.15
TNFRSF1A-201ENST00000162749 H7C1H1 209 aa14.09□□□□□ -0.15
TNFRSF1A-201ENST00000162749 K7EMI3 77 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms