RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 FOXC1Q12948 553 aa15□□□□□ -0.01
PPP1R3F-201ENST00000055335 NDUFV3P56181 108 aaKnown RBP14.99□□□□□ -0.01
PPP1R3F-201ENST00000055335 ATXN8Q156A1 80 aa14.99□□□□□ -0.01
PPP1R3F-201ENST00000055335 C2orf82Q6UX34 121 aa14.99□□□□□ -0.01
PPP1R3F-201ENST00000055335 TMEM263Q8WUH6 116 aaKnown RBP14.99□□□□□ -0.01
PPP1R3F-201ENST00000055335 KIF25-AS1Q9Y6Z4 181 aa14.99□□□□□ -0.01
PPP1R3F-201ENST00000055335 AMELXQ99217 191 aa14.99□□□□□ -0.01
PPP1R3F-201ENST00000055335 TIMM17AQ99595 171 aa14.99□□□□□ -0.01
PPP1R3F-201ENST00000055335 A0A0U1RRA0 63 aa14.99□□□□□ -0.01
PPP1R3F-201ENST00000055335 NHLRC4P0CG21 123 aaPredicted RBP14.98□□□□□ -0.01
PPP1R3F-201ENST00000055335 VPS13CQ709C8 3753 aa14.98□□□□□ -0.01
PPP1R3F-201ENST00000055335 CHD8Q9HCK8 2581 aa14.98□□□□□ -0.01
PPP1R3F-201ENST00000055335 TRIAP1O43715 76 aa14.98□□□□□ -0.01
PPP1R3F-201ENST00000055335 CRYBG3Q68DQ2 2970 aa14.98□□□□□ -0.01
PPP1R3F-201ENST00000055335 DAND5Q8N907 189 aa14.98□□□□□ -0.01
PPP1R3F-201ENST00000055335 CLEC2BQ92478 149 aa14.98□□□□□ -0.01
PPP1R3F-201ENST00000055335 A0A1W2PPR1 153 aa14.97□□□□□ -0.01
PPP1R3F-201ENST00000055335 IFITM1P13164 125 aa14.97□□□□□ -0.01
PPP1R3F-201ENST00000055335 SBSPONQ8IVN8 264 aa14.97□□□□□ -0.01
PPP1R3F-201ENST00000055335 ZNF22P17026 224 aaPredicted RBP14.97□□□□□ -0.01
PPP1R3F-201ENST00000055335 DUX3Q96PT4 197 aa14.97□□□□□ -0.01
PPP1R3F-201ENST00000055335 GAGE12JA6NER3 117 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 RHODO00212 210 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 LEPROTO15243 131 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 GAGE7O76087 117 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 GAGE12FP0CL80 117 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 GAGE12GP0CL81 117 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 GAGE12IP0CL82 117 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 P0DMU3 169 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 FAM231AP0DMU4 169 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 FAM231CP0DMU5 169 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 GAGE4Q13068 117 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 SPINK13Q1W4C9 94 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 SMIM20Q8N5G0 67 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 TMEM223A0PJW6 202 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 SOCS3O14543 225 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 BLCAPP62952 87 aa14.96□□□□□ -0.01
PPP1R3F-201ENST00000055335 IGHV4OR15-8A0A075B7B6 117 aa14.95□□□□□ -0.02
PPP1R3F-201ENST00000055335 A0A087WW49 117 aa14.95□□□□□ -0.02
PPP1R3F-201ENST00000055335 MOB4Q9Y3A3 225 aa14.95□□□□□ -0.02
PPP1R3F-201ENST00000055335 NDUFA4O00483 81 aa14.95□□□□□ -0.02
PPP1R3F-201ENST00000055335 CD28P10747 220 aa14.95□□□□□ -0.02
PPP1R3F-201ENST00000055335 CITED1Q99966 193 aa14.95□□□□□ -0.02
PPP1R3F-201ENST00000055335 H3BMM0 161 aa14.95□□□□□ -0.02
PPP1R3F-201ENST00000055335 UBE2WQ96B02 151 aa14.95□□□□□ -0.02
PPP1R3F-201ENST00000055335 A0A0J9YXY3 114 aa14.94□□□□□ -0.02
PPP1R3F-201ENST00000055335 KNCNA6PVL3 124 aa14.94□□□□□ -0.02
PPP1R3F-201ENST00000055335 FAM223BA6NKX1 122 aa14.94□□□□□ -0.02
PPP1R3F-201ENST00000055335 FAM223AQ8IWN6 122 aa14.94□□□□□ -0.02
PPP1R3F-201ENST00000055335 TIMM21Q9BVV7 248 aa14.93□□□□□ -0.02
PPP1R3F-201ENST00000055335 USP9YO00507 2555 aaPredicted RBP14.93□□□□□ -0.02
PPP1R3F-201ENST00000055335 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.93□□□□□ -0.02
PPP1R3F-201ENST00000055335 TRBV27A0A0K0K1C4 114 aa14.93□□□□□ -0.02
PPP1R3F-201ENST00000055335 IGHV3-30-3P0DP02 117 aa14.93□□□□□ -0.02
PPP1R3F-201ENST00000055335 C11orf71Q6IPW1 123 aa14.93□□□□□ -0.02
PPP1R3F-201ENST00000055335 PRM2P04554 102 aa14.92□□□□□ -0.02
PPP1R3F-201ENST00000055335 M0R2P5 195 aa14.92□□□□□ -0.02
PPP1R3F-201ENST00000055335 TMEM95Q3KNT9 176 aa14.92□□□□□ -0.02
PPP1R3F-201ENST00000055335 M0QY20 66 aa14.91□□□□□ -0.02
PPP1R3F-201ENST00000055335 PROK1P58294 105 aa14.91□□□□□ -0.02
PPP1R3F-201ENST00000055335 MED14OSP0DP75 135 aa14.91□□□□□ -0.02
PPP1R3F-201ENST00000055335 ADORA2A-AS1P86434 159 aa14.91□□□□□ -0.02
PPP1R3F-201ENST00000055335 ADAMTSL4-AS1Q5T5F5 129 aa14.91□□□□□ -0.02
PPP1R3F-201ENST00000055335 ZNF625Q96I27 306 aaPredicted RBP14.91□□□□□ -0.02
PPP1R3F-201ENST00000055335 H3BUX3 64 aa14.9□□□□□ -0.02
PPP1R3F-201ENST00000055335 DUX5Q96PT3 197 aa14.9□□□□□ -0.02
PPP1R3F-201ENST00000055335 DAZ1Q9NQZ3 744 aaKnown RBP14.9□□□□□ -0.02
PPP1R3F-201ENST00000055335 ID1P41134 155 aa14.9□□□□□ -0.02
PPP1R3F-201ENST00000055335 C20orf203Q8NBC4 194 aa14.9□□□□□ -0.02
PPP1R3F-201ENST00000055335 A0A0B4J2C4 111 aa14.89□□□□□ -0.03
PPP1R3F-201ENST00000055335 COX6CP09669 75 aa14.89□□□□□ -0.03
PPP1R3F-201ENST00000055335 ODF3Q96PU9 254 aa14.89□□□□□ -0.03
PPP1R3F-201ENST00000055335 NDUFA12Q9UI09 145 aa14.89□□□□□ -0.03
PPP1R3F-201ENST00000055335 IGLV4-3A0A075B6K6 122 aa14.89□□□□□ -0.03
PPP1R3F-201ENST00000055335 TRBV10-2A0A0K0K1G8 114 aa14.89□□□□□ -0.03
PPP1R3F-201ENST00000055335 ICOSQ9Y6W8 199 aa14.88□□□□□ -0.03
PPP1R3F-201ENST00000055335 KLLNB2CW77 178 aa14.88□□□□□ -0.03
PPP1R3F-201ENST00000055335 I3L3M4 83 aa14.87□□□□□ -0.03
PPP1R3F-201ENST00000055335 FAM19A4Q96LR4 140 aa14.87□□□□□ -0.03
PPP1R3F-201ENST00000055335 CHCHD5Q9BSY4 110 aa14.87□□□□□ -0.03
PPP1R3F-201ENST00000055335 IGHV3-16A0A0C4DH30 117 aa14.86□□□□□ -0.03
PPP1R3F-201ENST00000055335 LMO4P61968 165 aa14.86□□□□□ -0.03
PPP1R3F-201ENST00000055335 SPTBN4Q9H254 2564 aa14.86□□□□□ -0.03
PPP1R3F-201ENST00000055335 IGHV3-38A0A0C4DH36 116 aa14.86□□□□□ -0.03
PPP1R3F-201ENST00000055335 H7C423 109 aa14.86□□□□□ -0.03
PPP1R3F-201ENST00000055335 LGALS9O00182 355 aa14.86□□□□□ -0.03
PPP1R3F-201ENST00000055335 HERV-K104P63124 156 aa14.86□□□□□ -0.03
PPP1R3F-201ENST00000055335 Q9UF83 564 aa14.86□□□□□ -0.03
PPP1R3F-201ENST00000055335 MYO9AB2RTY4 2548 aa14.86□□□□□ -0.03
PPP1R3F-201ENST00000055335 MEIG1Q5JSS6 88 aa14.86□□□□□ -0.03
PPP1R3F-201ENST00000055335 IGHV4-38-2P0DP08 117 aa14.85□□□□□ -0.03
PPP1R3F-201ENST00000055335 NXPH4O95158 308 aa14.85□□□□□ -0.03
PPP1R3F-201ENST00000055335 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.84□□□□□ -0.03
PPP1R3F-201ENST00000055335 IGKV2-29A2NJV5 120 aaPredicted RBP14.84□□□□□ -0.03
PPP1R3F-201ENST00000055335 RPL13AP40429 203 aaKnown RBP14.84□□□□□ -0.03
PPP1R3F-201ENST00000055335 CSMD2Q7Z408 3487 aa14.84□□□□□ -0.03
PPP1R3F-201ENST00000055335 IGHV1-69P01742 117 aa14.83□□□□□ -0.04
PPP1R3F-201ENST00000055335 C10orf99Q6UWK7 81 aa14.83□□□□□ -0.04
PPP1R3F-201ENST00000055335 IGHV1OR15-1A0A075B7D0 117 aa14.83□□□□□ -0.04
PPP1R3F-201ENST00000055335 RPL32P62910 135 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms