RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 S100A8P05109 93 aa12.45□□□□□ -0.42
PHGDH-230ENST00000641927 PIK3CD-AS1Q5SR53 167 aa12.45□□□□□ -0.42
PHGDH-230ENST00000641927 OR4C5Q8NGB2 326 aa12.45□□□□□ -0.42
PHGDH-230ENST00000641927 FAM210BQ96KR6 192 aa12.45□□□□□ -0.42
PHGDH-230ENST00000641927 LOC105371267A0A1B0GV96 52 aa12.44□□□□□ -0.42
PHGDH-230ENST00000641927 IGHV3-53P01767 116 aa12.44□□□□□ -0.42
PHGDH-230ENST00000641927 RAB5AP20339 215 aa12.44□□□□□ -0.42
PHGDH-230ENST00000641927 NDUFAF3Q9BU61 184 aa12.44□□□□□ -0.42
PHGDH-230ENST00000641927 COL7A1Q02388 2944 aa12.44□□□□□ -0.42
PHGDH-230ENST00000641927 IGHV3-73A0A0B4J1V6 119 aa12.43□□□□□ -0.42
PHGDH-230ENST00000641927 CFAP126Q5VTH2 177 aa12.43□□□□□ -0.42
PHGDH-230ENST00000641927 C11orf45Q8TAV5 145 aa12.43□□□□□ -0.42
PHGDH-230ENST00000641927 SAMD10Q9BYL1 202 aa12.43□□□□□ -0.42
PHGDH-230ENST00000641927 RASL11AQ6T310 242 aa12.42□□□□□ -0.42
PHGDH-230ENST00000641927 LINC00612Q8N6U2 182 aa12.42□□□□□ -0.42
PHGDH-230ENST00000641927 U3KQK5 164 aa12.42□□□□□ -0.42
PHGDH-230ENST00000641927 TRAV4A0A0B4J268 109 aa12.42□□□□□ -0.42
PHGDH-230ENST00000641927 MGPP08493 103 aa12.42□□□□□ -0.42
PHGDH-230ENST00000641927 POM121L12Q8N7R1 296 aa12.42□□□□□ -0.42
PHGDH-230ENST00000641927 ZNF479Q96JC4 524 aa12.42□□□□□ -0.42
PHGDH-230ENST00000641927 TMEM191AQ9H0A3 160 aa12.42□□□□□ -0.42
PHGDH-230ENST00000641927 DPH3P1Q9H4G8 78 aa12.42□□□□□ -0.42
PHGDH-230ENST00000641927 RS1O15537 224 aa12.41□□□□□ -0.42
PHGDH-230ENST00000641927 F5H697 171 aa12.4□□□□□ -0.42
PHGDH-230ENST00000641927 CRYGDP07320 174 aa12.4□□□□□ -0.42
PHGDH-230ENST00000641927 NANOS2P60321 138 aaKnown RBP12.4□□□□□ -0.42
PHGDH-230ENST00000641927 ZNF56Q15929 161 aa12.4□□□□□ -0.42
PHGDH-230ENST00000641927 AMN1Q8IY45 258 aa12.4□□□□□ -0.42
PHGDH-230ENST00000641927 HTN3P15516 51 aa12.39□□□□□ -0.43
PHGDH-230ENST00000641927 C12orf74Q32Q52 190 aa12.39□□□□□ -0.43
PHGDH-230ENST00000641927 FBN3Q75N90 2809 aa12.39□□□□□ -0.43
PHGDH-230ENST00000641927 RHODO00212 210 aa12.38□□□□□ -0.43
PHGDH-230ENST00000641927 RPS10P46783 165 aaKnown RBP12.38□□□□□ -0.43
PHGDH-230ENST00000641927 COX19Q49B96 90 aa12.38□□□□□ -0.43
PHGDH-230ENST00000641927 TMEM136Q6ZRR5 245 aa12.38□□□□□ -0.43
PHGDH-230ENST00000641927 FRZBQ92765 325 aa12.38□□□□□ -0.43
PHGDH-230ENST00000641927 C18orf15Q96N68 181 aa12.38□□□□□ -0.43
PHGDH-230ENST00000641927 GNB1LQ9BYB4 327 aa12.38□□□□□ -0.43
PHGDH-230ENST00000641927 KIF25-AS1Q9Y6Z4 181 aa12.38□□□□□ -0.43
PHGDH-230ENST00000641927 TRGV4A0A0C4DH28 118 aa12.38□□□□□ -0.43
PHGDH-230ENST00000641927 ATP5G1P05496 136 aa12.38□□□□□ -0.43
PHGDH-230ENST00000641927 HLA-DQA1P01909 254 aa12.37□□□□□ -0.43
PHGDH-230ENST00000641927 FAM104BQ5XKR9 115 aa12.37□□□□□ -0.43
PHGDH-230ENST00000641927 ZFP2Q6ZN57 461 aa12.37□□□□□ -0.43
PHGDH-230ENST00000641927 Q6ZTC4 211 aa12.37□□□□□ -0.43
PHGDH-230ENST00000641927 GATD1Q8NB37 220 aa12.37□□□□□ -0.43
PHGDH-230ENST00000641927 UFSP1Q6NVU6 142 aa12.36□□□□□ -0.43
PHGDH-230ENST00000641927 TRAPPC1Q9Y5R8 145 aa12.36□□□□□ -0.43
PHGDH-230ENST00000641927 TRAV26-2A0A0B4J265 109 aa12.35□□□□□ -0.43
PHGDH-230ENST00000641927 F5H768 121 aa12.35□□□□□ -0.43
PHGDH-230ENST00000641927 APCSP02743 223 aa12.35□□□□□ -0.43
PHGDH-230ENST00000641927 MT-ND6P03923 174 aa12.35□□□□□ -0.43
PHGDH-230ENST00000641927 RAB4AP20338 218 aa12.35□□□□□ -0.43
PHGDH-230ENST00000641927 LINC00315P59091 139 aa12.35□□□□□ -0.43
PHGDH-230ENST00000641927 SLAQ13239 276 aa12.35□□□□□ -0.43
PHGDH-230ENST00000641927 MRPL18Q9H0U6 180 aaKnown RBP12.35□□□□□ -0.43
PHGDH-230ENST00000641927 NACAE9PAV3 2078 aa12.35□□□□□ -0.43
PHGDH-230ENST00000641927 C1orf196B1AJZ1 125 aa12.35□□□□□ -0.43
PHGDH-230ENST00000641927 CIDEAO60543 219 aa12.35□□□□□ -0.43
PHGDH-230ENST00000641927 RNF185Q96GF1 192 aa12.35□□□□□ -0.43
PHGDH-230ENST00000641927 EDA2RQ9HAV5 297 aa12.35□□□□□ -0.43
PHGDH-230ENST00000641927 HOXA5P20719 270 aa12.34□□□□□ -0.43
PHGDH-230ENST00000641927 FABP9Q0Z7S8 132 aa12.34□□□□□ -0.43
PHGDH-230ENST00000641927 FHL2Q14192 279 aa12.34□□□□□ -0.43
PHGDH-230ENST00000641927 MRPL51Q4U2R6 128 aaKnown RBP12.34□□□□□ -0.43
PHGDH-230ENST00000641927 SUMO4Q6EEV6 95 aa12.34□□□□□ -0.43
PHGDH-230ENST00000641927 Q6ZSN1 163 aa12.34□□□□□ -0.43
PHGDH-230ENST00000641927 SMKR1H3BMG3 65 aa12.32□□□□□ -0.44
PHGDH-230ENST00000641927 NCR2O95944 276 aa12.32□□□□□ -0.44
PHGDH-230ENST00000641927 CKS2P33552 79 aa12.32□□□□□ -0.44
PHGDH-230ENST00000641927 RAB5BP61020 215 aa12.32□□□□□ -0.44
PHGDH-230ENST00000641927 KIAA1644Q3SXP7 199 aa12.32□□□□□ -0.44
PHGDH-230ENST00000641927 HHLA3Q9XRX5 114 aa12.32□□□□□ -0.44
PHGDH-230ENST00000641927 GATA1P15976 413 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-230ENST00000641927 MRAP2Q96G30 205 aa12.32□□□□□ -0.44
PHGDH-230ENST00000641927 DEFB131BA0A096LNP1 70 aa12.31□□□□□ -0.44
PHGDH-230ENST00000641927 D6R8Y8 96 aa12.31□□□□□ -0.44
PHGDH-230ENST00000641927 TRGC2P03986 189 aa12.31□□□□□ -0.44
PHGDH-230ENST00000641927 SLC25A29Q8N8R3 303 aa12.31□□□□□ -0.44
PHGDH-230ENST00000641927 STAB2Q8WWQ8 2551 aa12.3□□□□□ -0.44
PHGDH-230ENST00000641927 H7C1H1 209 aa12.3□□□□□ -0.44
PHGDH-230ENST00000641927 K7EQD1 137 aa12.3□□□□□ -0.44
PHGDH-230ENST00000641927 P0DMU3 169 aa12.3□□□□□ -0.44
PHGDH-230ENST00000641927 FAM231AP0DMU4 169 aa12.3□□□□□ -0.44
PHGDH-230ENST00000641927 FAM231CP0DMU5 169 aa12.3□□□□□ -0.44
PHGDH-230ENST00000641927 PRO0255Q9UI72 69 aa12.3□□□□□ -0.44
PHGDH-230ENST00000641927 A0A0J9YY99 117 aa12.29□□□□□ -0.44
PHGDH-230ENST00000641927 M0QY20 66 aa12.29□□□□□ -0.44
PHGDH-230ENST00000641927 GAS8-AS1O95177 125 aa12.29□□□□□ -0.44
PHGDH-230ENST00000641927 ORMDL3Q8N138 153 aa12.29□□□□□ -0.44
PHGDH-230ENST00000641927 TRAV26-1A0A087WT03 109 aa12.29□□□□□ -0.44
PHGDH-230ENST00000641927 TRAV10A0A0B4J240 114 aa12.29□□□□□ -0.44
PHGDH-230ENST00000641927 TRBV6-4A0A1B0GX49 114 aa12.29□□□□□ -0.44
PHGDH-230ENST00000641927 RHOHQ15669 191 aa12.29□□□□□ -0.44
PHGDH-230ENST00000641927 PRADC1Q9BSG0 188 aa12.29□□□□□ -0.44
PHGDH-230ENST00000641927 PAX4O43316 350 aa12.28□□□□□ -0.44
PHGDH-230ENST00000641927 PPBPP02775 128 aa12.28□□□□□ -0.44
PHGDH-230ENST00000641927 CRYBA4P53673 196 aa12.28□□□□□ -0.44
PHGDH-230ENST00000641927 RPL39LQ96EH5 51 aaKnown RBP12.28□□□□□ -0.44
PHGDH-230ENST00000641927 PRELID3AQ96N28 172 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms