RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	WNK1	Q9H4A3	2382 aa		12.53	□□□□□ -0.4
PHGDH-223	ENST00000641597	TGFA	P01135	160 aa		12.53	□□□□□ -0.4
PHGDH-223	ENST00000641597	PLN	P26678	52 aa		12.53	□□□□□ -0.4
PHGDH-223	ENST00000641597	CCDC168	Q8NDH2	2452 aa		12.52	□□□□□ -0.4
PHGDH-223	ENST00000641597	CRYGD	P07320	174 aa		12.52	□□□□□ -0.4
PHGDH-223	ENST00000641597	HLA-DRB4	P13762	266 aa		12.52	□□□□□ -0.4
PHGDH-223	ENST00000641597	MTURN	Q8N3F0	131 aa		12.52	□□□□□ -0.4
PHGDH-223	ENST00000641597	HLA-DRB4	X5D2U9	266 aa		12.52	□□□□□ -0.4
PHGDH-223	ENST00000641597	BRI3	O95415	125 aa		12.52	□□□□□ -0.41
PHGDH-223	ENST00000641597	DEFB136	Q30KP8	78 aa		12.52	□□□□□ -0.41
PHGDH-223	ENST00000641597	C18orf65	Q6ZTR6	163 aa		12.52	□□□□□ -0.41
PHGDH-223	ENST00000641597	HIST1H4G	Q99525	98 aa		12.52	□□□□□ -0.41
PHGDH-223	ENST00000641597	CYSLTR1	Q9Y271	337 aa		12.52	□□□□□ -0.41
PHGDH-223	ENST00000641597	TP53TG1	Q9Y2A0	90 aa		12.52	□□□□□ -0.41
PHGDH-223	ENST00000641597	CD300E	Q496F6	205 aa	Predicted RBP	12.51	□□□□□ -0.41
PHGDH-223	ENST00000641597	OPRPN	Q99935	248 aa	Predicted RBP	12.51	□□□□□ -0.41
PHGDH-223	ENST00000641597	HTN1	P15515	57 aa		12.51	□□□□□ -0.41
PHGDH-223	ENST00000641597		Q8N1Y9	231 aa		12.51	□□□□□ -0.41
PHGDH-223	ENST00000641597	PLEKHB2	Q96CS7	222 aa		12.51	□□□□□ -0.41
PHGDH-223	ENST00000641597	TM2D2	Q9BX73	214 aa		12.51	□□□□□ -0.41
PHGDH-223	ENST00000641597	ZNF256	Q9Y2P7	627 aa	Predicted RBP	12.51	□□□□□ -0.41
PHGDH-223	ENST00000641597	AKAP9	Q99996	3911 aa		12.51	□□□□□ -0.41
PHGDH-223	ENST00000641597	FABP2	P12104	132 aa		12.5	□□□□□ -0.41
PHGDH-223	ENST00000641597	RIPPLY3	P57055	190 aa		12.5	□□□□□ -0.41
PHGDH-223	ENST00000641597	PRADC1	Q9BSG0	188 aa		12.5	□□□□□ -0.41
PHGDH-223	ENST00000641597	IGHV4OR15-8	A0A075B7B6	117 aa		12.5	□□□□□ -0.41
PHGDH-223	ENST00000641597		A0A087WW49	117 aa		12.5	□□□□□ -0.41
PHGDH-223	ENST00000641597	TRAV12-1	A0A0B4J245	112 aa		12.5	□□□□□ -0.41
PHGDH-223	ENST00000641597	OR11H12	B2RN74	326 aa		12.5	□□□□□ -0.41
PHGDH-223	ENST00000641597	AMTN	Q6UX39	209 aa		12.5	□□□□□ -0.41
PHGDH-223	ENST00000641597	OR11H1	Q8NG94	326 aa		12.5	□□□□□ -0.41
PHGDH-223	ENST00000641597	OR11H2	Q8NH07	326 aa		12.5	□□□□□ -0.41
PHGDH-223	ENST00000641597	BEX4	Q9NWD9	120 aa	Predicted RBP	12.5	□□□□□ -0.41
PHGDH-223	ENST00000641597	APC	P25054	2843 aa		12.49	□□□□□ -0.41
PHGDH-223	ENST00000641597	UBR5	O95071	2799 aa	Predicted RBP	12.49	□□□□□ -0.41
PHGDH-223	ENST00000641597	NXPH4	O95158	308 aa		12.49	□□□□□ -0.41
PHGDH-223	ENST00000641597	ZFP2	Q6ZN57	461 aa		12.49	□□□□□ -0.41
PHGDH-223	ENST00000641597	DUX3	Q96PT4	197 aa		12.49	□□□□□ -0.41
PHGDH-223	ENST00000641597	C11orf86	A6NJI1	115 aa		12.48	□□□□□ -0.41
PHGDH-223	ENST00000641597	LGALS1	P09382	135 aa	Known RBP	12.48	□□□□□ -0.41
PHGDH-223	ENST00000641597	SLC25A16	P16260	332 aa		12.48	□□□□□ -0.41
PHGDH-223	ENST00000641597	ID1	P41134	155 aa		12.48	□□□□□ -0.41
PHGDH-223	ENST00000641597		A0A0J9YX75	114 aa		12.48	□□□□□ -0.41
PHGDH-223	ENST00000641597	MYMX	A0A1B0GTQ4	84 aa		12.48	□□□□□ -0.41
PHGDH-223	ENST00000641597	SDHAF1	A6NFY7	115 aa		12.48	□□□□□ -0.41
PHGDH-223	ENST00000641597		K7EMT4	169 aa		12.48	□□□□□ -0.41
PHGDH-223	ENST00000641597	KRTAP10-9	P60411	292 aa		12.48	□□□□□ -0.41
PHGDH-223	ENST00000641597	C12orf74	Q32Q52	190 aa		12.48	□□□□□ -0.41
PHGDH-223	ENST00000641597	MORN3	Q6PF18	240 aa	Predicted RBP	12.48	□□□□□ -0.41
PHGDH-223	ENST00000641597	SFTA2	Q6UW10	78 aa		12.48	□□□□□ -0.41
PHGDH-223	ENST00000641597	PRRC2A	P48634	2157 aa	Known RBP	12.48	□□□□□ -0.41
PHGDH-223	ENST00000641597	IGHV3-16	A0A0C4DH30	117 aa		12.47	□□□□□ -0.41
PHGDH-223	ENST00000641597	MED14OS	P0DP75	135 aa		12.47	□□□□□ -0.41
PHGDH-223	ENST00000641597	IGLV4-69	A0A075B6H9	119 aa		12.47	□□□□□ -0.41
PHGDH-223	ENST00000641597	TRBV7-3	A0A075B6L6	115 aa		12.47	□□□□□ -0.41
PHGDH-223	ENST00000641597		A0A096LNT2	108 aa		12.47	□□□□□ -0.41
PHGDH-223	ENST00000641597	POLR2K	P53803	58 aa	Known RBP	12.47	□□□□□ -0.41
PHGDH-223	ENST00000641597	IGLL5	B9A064	214 aa		12.46	□□□□□ -0.41
PHGDH-223	ENST00000641597	ZNF56	Q15929	161 aa		12.46	□□□□□ -0.41
PHGDH-223	ENST00000641597	IGHV3-73	A0A0B4J1V6	119 aa		12.46	□□□□□ -0.42
PHGDH-223	ENST00000641597	IGIP	A6NJ69	53 aa		12.46	□□□□□ -0.42
PHGDH-223	ENST00000641597	RBMY1A1	P0DJD3	496 aa	Known RBP	12.46	□□□□□ -0.42
PHGDH-223	ENST00000641597	RBMY1C	P0DJD4	496 aa		12.46	□□□□□ -0.42
PHGDH-223	ENST00000641597	RBMY1F	Q15415	496 aa	Known RBP	12.46	□□□□□ -0.42
PHGDH-223	ENST00000641597	ZNF815P	A8K554	130 aa		12.45	□□□□□ -0.42
PHGDH-223	ENST00000641597		K7EQG2	157 aa		12.45	□□□□□ -0.42
PHGDH-223	ENST00000641597	HOXD3	P31249	432 aa	Predicted RBP	12.45	□□□□□ -0.42
PHGDH-223	ENST00000641597	POM121L12	Q8N7R1	296 aa		12.45	□□□□□ -0.42
PHGDH-223	ENST00000641597	LINC01356	Q8N9X3	169 aa		12.45	□□□□□ -0.42
PHGDH-223	ENST00000641597	JMJD1C	Q15652	2540 aa		12.45	□□□□□ -0.42
PHGDH-223	ENST00000641597	KNCN	A6PVL3	124 aa		12.45	□□□□□ -0.42
PHGDH-223	ENST00000641597		K7ERU9	68 aa		12.45	□□□□□ -0.42
PHGDH-223	ENST00000641597		Q9UF83	564 aa		12.45	□□□□□ -0.42
PHGDH-223	ENST00000641597	ITPR3	Q14573	2671 aa		12.45	□□□□□ -0.42
PHGDH-223	ENST00000641597		H3BMG7	143 aa		12.44	□□□□□ -0.42
PHGDH-223	ENST00000641597	TSPEAR-AS2	P59090	65 aa		12.44	□□□□□ -0.42
PHGDH-223	ENST00000641597	TRBV7-9	A0A0J9YWB2	115 aa		12.44	□□□□□ -0.42
PHGDH-223	ENST00000641597		P0DMU3	169 aa		12.44	□□□□□ -0.42
PHGDH-223	ENST00000641597	FAM231A	P0DMU4	169 aa		12.44	□□□□□ -0.42
PHGDH-223	ENST00000641597	FAM231C	P0DMU5	169 aa		12.44	□□□□□ -0.42
PHGDH-223	ENST00000641597	SLURP1	P55000	103 aa		12.44	□□□□□ -0.42
PHGDH-223	ENST00000641597	PROK1	P58294	105 aa		12.44	□□□□□ -0.42
PHGDH-223	ENST00000641597	RPL24	P83731	157 aa	Known RBP	12.44	□□□□□ -0.42
PHGDH-223	ENST00000641597	ZNF479	Q96JC4	524 aa		12.44	□□□□□ -0.42
PHGDH-223	ENST00000641597	NACA	E9PAV3	2078 aa		12.44	□□□□□ -0.42
PHGDH-223	ENST00000641597		E9PLD3	99 aa		12.43	□□□□□ -0.42
PHGDH-223	ENST00000641597	HOXA3	O43365	443 aa	Predicted RBP	12.43	□□□□□ -0.42
PHGDH-223	ENST00000641597	ZNRF2	Q8NHG8	242 aa		12.43	□□□□□ -0.42
PHGDH-223	ENST00000641597	C9orf85	Q96MD7	179 aa		12.43	□□□□□ -0.42
PHGDH-223	ENST00000641597	CR1	P17927	2039 aa		12.43	□□□□□ -0.42
PHGDH-223	ENST00000641597	SNRPD3	P62318	126 aa	Known RBP	12.43	□□□□□ -0.42
PHGDH-223	ENST00000641597	SCGB2A2	Q13296	93 aa		12.43	□□□□□ -0.42
PHGDH-223	ENST00000641597	BBC3	Q96PG8	261 aa	Predicted RBP	12.43	□□□□□ -0.42
PHGDH-223	ENST00000641597		M0QY20	66 aa		12.42	□□□□□ -0.42
PHGDH-223	ENST00000641597	WFDC2	Q14508	124 aa		12.42	□□□□□ -0.42
PHGDH-223	ENST00000641597	SCGB1D4	Q6XE38	83 aa		12.42	□□□□□ -0.42
PHGDH-223	ENST00000641597	TEX48	A0A1B0GUV7	120 aa		12.42	□□□□□ -0.42
PHGDH-223	ENST00000641597	COX6B1	P14854	86 aa		12.42	□□□□□ -0.42
PHGDH-223	ENST00000641597	ZNF876P	Q49A33	203 aa		12.42	□□□□□ -0.42
PHGDH-223	ENST00000641597	KIR2DL4	Q99706	377 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms