RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 KNCNA6PVL3 124 aa12.61□□□□□ -0.39
PHGDH-211ENST00000641213 RPL32P62910 135 aaKnown RBP12.61□□□□□ -0.39
PHGDH-211ENST00000641213 C2orf66Q6UXQ4 117 aa12.61□□□□□ -0.39
PHGDH-211ENST00000641213 GTSCR1Q86UQ5 136 aa12.61□□□□□ -0.39
PHGDH-211ENST00000641213 F5H697 171 aa12.61□□□□□ -0.39
PHGDH-211ENST00000641213 DEFB131AP59861 70 aa12.61□□□□□ -0.39
PHGDH-211ENST00000641213 HIST2H2BDQ6DRA6 164 aa12.61□□□□□ -0.39
PHGDH-211ENST00000641213 NEGR1Q7Z3B1 354 aa12.61□□□□□ -0.39
PHGDH-211ENST00000641213 TEX29Q8N6K0 151 aa12.61□□□□□ -0.39
PHGDH-211ENST00000641213 SYT8Q8NBV8 401 aa12.61□□□□□ -0.39
PHGDH-211ENST00000641213 KLHL30-AS1Q8NEE0 82 aa12.61□□□□□ -0.39
PHGDH-211ENST00000641213 DLX4Q92988 240 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-211ENST00000641213 FLNAP21333 2647 aaKnown RBP12.6□□□□□ -0.39
PHGDH-211ENST00000641213 DNAJC9-AS1A6NH13 148 aa12.6□□□□□ -0.39
PHGDH-211ENST00000641213 POLR2KP53803 58 aaKnown RBP12.6□□□□□ -0.39
PHGDH-211ENST00000641213 TMEM61Q8N0U2 210 aa12.6□□□□□ -0.39
PHGDH-211ENST00000641213 TRAV2A0A0B4J234 112 aa12.6□□□□□ -0.39
PHGDH-211ENST00000641213 FAM74A4Q5TZK3 123 aa12.6□□□□□ -0.39
PHGDH-211ENST00000641213 NEXN-AS1Q8NBZ9 246 aa12.6□□□□□ -0.39
PHGDH-211ENST00000641213 SONP18583 2426 aaKnown RBP12.6□□□□□ -0.39
PHGDH-211ENST00000641213 A8MTW9 85 aa12.59□□□□□ -0.39
PHGDH-211ENST00000641213 H7C1H1 209 aa12.59□□□□□ -0.39
PHGDH-211ENST00000641213 RBMY1A1P0DJD3 496 aaKnown RBP12.59□□□□□ -0.39
PHGDH-211ENST00000641213 RBMY1CP0DJD4 496 aa12.59□□□□□ -0.39
PHGDH-211ENST00000641213 HLA-DRB4P13762 266 aa12.59□□□□□ -0.39
PHGDH-211ENST00000641213 PLNP26678 52 aa12.59□□□□□ -0.39
PHGDH-211ENST00000641213 SEC11AP67812 179 aa12.59□□□□□ -0.39
PHGDH-211ENST00000641213 HSD52Q0P140 79 aa12.59□□□□□ -0.39
PHGDH-211ENST00000641213 RBMY1FQ15415 496 aaKnown RBP12.59□□□□□ -0.39
PHGDH-211ENST00000641213 ZNF124Q15973 351 aa12.59□□□□□ -0.39
PHGDH-211ENST00000641213 TTTY13Q9BZ97 58 aa12.59□□□□□ -0.39
PHGDH-211ENST00000641213 HLA-DRB4X5D2U9 266 aa12.59□□□□□ -0.39
PHGDH-211ENST00000641213 AKAP9Q99996 3911 aa12.59□□□□□ -0.39
PHGDH-211ENST00000641213 F8VRH5 84 aa12.58□□□□□ -0.39
PHGDH-211ENST00000641213 CRYGDP07320 174 aa12.58□□□□□ -0.39
PHGDH-211ENST00000641213 CBY3A6NI87 242 aa12.58□□□□□ -0.4
PHGDH-211ENST00000641213 H3BMM0 161 aa12.58□□□□□ -0.4
PHGDH-211ENST00000641213 CCL25O15444 150 aa12.58□□□□□ -0.4
PHGDH-211ENST00000641213 ERASQ7Z444 233 aa12.58□□□□□ -0.4
PHGDH-211ENST00000641213 PDZD2O15018 2839 aa12.58□□□□□ -0.4
PHGDH-211ENST00000641213 TRGV11A0A075B6L2 103 aa12.57□□□□□ -0.4
PHGDH-211ENST00000641213 UBE2V1Q13404 147 aa12.57□□□□□ -0.4
PHGDH-211ENST00000641213 BAALCQ8WXS3 180 aa12.57□□□□□ -0.4
PHGDH-211ENST00000641213 CHTOPQ9Y3Y2 248 aaKnown RBP12.57□□□□□ -0.4
PHGDH-211ENST00000641213 RBMY1BA6NDE4 496 aaKnown RBP12.57□□□□□ -0.4
PHGDH-211ENST00000641213 RBMY1EA6NEQ0 496 aaKnown RBP12.57□□□□□ -0.4
PHGDH-211ENST00000641213 VCYO14598 125 aa12.57□□□□□ -0.4
PHGDH-211ENST00000641213 RBMY1DP0C7P1 496 aaKnown RBP12.57□□□□□ -0.4
PHGDH-211ENST00000641213 PTTG1IPP53801 180 aa12.57□□□□□ -0.4
PHGDH-211ENST00000641213 ZFP2Q6ZN57 461 aa12.57□□□□□ -0.4
PHGDH-211ENST00000641213 ESM1Q9NQ30 184 aa12.57□□□□□ -0.4
PHGDH-211ENST00000641213 CHD6Q8TD26 2715 aa12.56□□□□□ -0.4
PHGDH-211ENST00000641213 TRBV6-5A0A0K0K1A5 114 aa12.56□□□□□ -0.4
PHGDH-211ENST00000641213 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
PHGDH-211ENST00000641213 ZNF56Q15929 161 aa12.56□□□□□ -0.4
PHGDH-211ENST00000641213 DEFB114Q30KQ6 69 aa12.56□□□□□ -0.4
PHGDH-211ENST00000641213 ZNF876PQ49A33 203 aa12.56□□□□□ -0.4
PHGDH-211ENST00000641213 DYNLRB2Q8TF09 96 aa12.56□□□□□ -0.4
PHGDH-211ENST00000641213 CCDC168Q8NDH2 2452 aa12.55□□□□□ -0.4
PHGDH-211ENST00000641213 M0QY20 66 aa12.55□□□□□ -0.4
PHGDH-211ENST00000641213 MORN3Q6PF18 240 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-211ENST00000641213 DEFB104AQ8WTQ1 72 aa12.55□□□□□ -0.4
PHGDH-211ENST00000641213 MAP6D1Q9H9H5 199 aa12.55□□□□□ -0.4
PHGDH-211ENST00000641213 HIGD1BQ9P298 99 aa12.55□□□□□ -0.4
PHGDH-211ENST00000641213 CYSLTR1Q9Y271 337 aa12.55□□□□□ -0.4
PHGDH-211ENST00000641213 TRBV27A0A0K0K1C4 114 aa12.55□□□□□ -0.4
PHGDH-211ENST00000641213 KRTAP1-1Q07627 177 aa12.55□□□□□ -0.4
PHGDH-211ENST00000641213 KIR2DL4Q99706 377 aa12.55□□□□□ -0.4
PHGDH-211ENST00000641213 VAMP3Q15836 100 aa12.54□□□□□ -0.4
PHGDH-211ENST00000641213 RAX2Q96IS3 184 aa12.54□□□□□ -0.4
PHGDH-211ENST00000641213 TP53TG1Q9Y2A0 90 aa12.54□□□□□ -0.4
PHGDH-211ENST00000641213 TRBV25-1A0A075B6N4 114 aa12.53□□□□□ -0.4
PHGDH-211ENST00000641213 PRSS29PA6NIE9 313 aa12.53□□□□□ -0.4
PHGDH-211ENST00000641213 ZNF256Q9Y2P7 627 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-211ENST00000641213 NACAE9PAV3 2078 aa12.53□□□□□ -0.4
PHGDH-211ENST00000641213 NF1P21359 2839 aa12.53□□□□□ -0.4
PHGDH-211ENST00000641213 A6NDN8 102 aa12.53□□□□□ -0.4
PHGDH-211ENST00000641213 PLA2G2AP14555 144 aa12.53□□□□□ -0.4
PHGDH-211ENST00000641213 HTN1P15515 57 aa12.53□□□□□ -0.4
PHGDH-211ENST00000641213 CD300EQ496F6 205 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-211ENST00000641213 MAPKAPK5-AS1Q8N8E1 139 aa12.53□□□□□ -0.4
PHGDH-211ENST00000641213 LINC01549A6NIU2 74 aa12.52□□□□□ -0.4
PHGDH-211ENST00000641213 IGIPA6NJ69 53 aa12.52□□□□□ -0.4
PHGDH-211ENST00000641213 TSHBP01222 138 aa12.52□□□□□ -0.4
PHGDH-211ENST00000641213 TRAV8-6A0A0B4J262 113 aa12.52□□□□□ -0.41
PHGDH-211ENST00000641213 RIPPLY3P57055 190 aa12.52□□□□□ -0.41
PHGDH-211ENST00000641213 RPL39P62891 51 aaKnown RBP12.52□□□□□ -0.41
PHGDH-211ENST00000641213 TRPT1Q86TN4 253 aaKnown RBP12.52□□□□□ -0.41
PHGDH-211ENST00000641213 C11orf44Q8N8P7 122 aa12.52□□□□□ -0.41
PHGDH-211ENST00000641213 CHAC1Q9BUX1 264 aa12.52□□□□□ -0.41
PHGDH-211ENST00000641213 WNK1Q9H4A3 2382 aa12.52□□□□□ -0.41
PHGDH-211ENST00000641213 A0A1W2PRX2 142 aa12.5□□□□□ -0.41
PHGDH-211ENST00000641213 J3QKU1 62 aa12.5□□□□□ -0.41
PHGDH-211ENST00000641213 KMT2BQ9UMN6 2715 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-211ENST00000641213 H3BRM9 83 aa12.5□□□□□ -0.41
PHGDH-211ENST00000641213 PRM2P04554 102 aa12.5□□□□□ -0.41
PHGDH-211ENST00000641213 CD28P10747 220 aa12.5□□□□□ -0.41
PHGDH-211ENST00000641213 FHL3Q13643 280 aa12.5□□□□□ -0.41
PHGDH-211ENST00000641213 AMMECR1LQ6DCA0 310 aa12.5□□□□□ -0.41
PHGDH-211ENST00000641213 SPAG8Q99932 426 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms