RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 HLA-DMBP28068 263 aa9.88□□□□□ -0.83
HLA-C-210ENST00000640219 Q8N976 141 aa9.88□□□□□ -0.83
HLA-C-210ENST00000640219 GATD1Q8NB37 220 aa9.88□□□□□ -0.83
HLA-C-210ENST00000640219 ZC2HC1AQ96GY0 325 aa9.88□□□□□ -0.83
HLA-C-210ENST00000640219 C17orf77Q96MU5 243 aa9.88□□□□□ -0.83
HLA-C-210ENST00000640219 TMEM70Q9BUB7 260 aa9.88□□□□□ -0.83
HLA-C-210ENST00000640219 HSPB8Q9UJY1 196 aa9.88□□□□□ -0.83
HLA-C-210ENST00000640219 DMBT1Q9UGM3 2413 aaPredicted RBP9.87□□□□□ -0.83
HLA-C-210ENST00000640219 TRAV9-2A0A087WT02 112 aa9.87□□□□□ -0.83
HLA-C-210ENST00000640219 Q6ZTC4 211 aa9.87□□□□□ -0.83
HLA-C-210ENST00000640219 CLEC5AQ9NY25 188 aa9.87□□□□□ -0.83
HLA-C-210ENST00000640219 IGLV2-18A0A075B6J9 118 aa9.86□□□□□ -0.83
HLA-C-210ENST00000640219 HSBP1L1C9JCN9 74 aa9.86□□□□□ -0.83
HLA-C-210ENST00000640219 LEPROTL1O95214 131 aa9.86□□□□□ -0.83
HLA-C-210ENST00000640219 GIG44P09565 113 aaPredicted RBP9.86□□□□□ -0.83
HLA-C-210ENST00000640219 HNRNPA3P51991 378 aaKnown RBP9.86□□□□□ -0.83
HLA-C-210ENST00000640219 TDRG1Q3Y452 100 aa9.86□□□□□ -0.83
HLA-C-210ENST00000640219 Q6ZR54 194 aa9.86□□□□□ -0.83
HLA-C-210ENST00000640219 MAP1LC3CQ9BXW4 147 aa9.86□□□□□ -0.83
HLA-C-210ENST00000640219 TMEM191AQ9H0A3 160 aa9.86□□□□□ -0.83
HLA-C-210ENST00000640219 TRAV2A0A0B4J234 112 aa9.85□□□□□ -0.83
HLA-C-210ENST00000640219 CTRLP40313 264 aa9.85□□□□□ -0.83
HLA-C-210ENST00000640219 COL5A1-AS1Q5SY13 56 aa9.85□□□□□ -0.83
HLA-C-210ENST00000640219 IGFL4Q6B9Z1 124 aa9.85□□□□□ -0.83
HLA-C-210ENST00000640219 Q6ZN92 141 aa9.85□□□□□ -0.83
HLA-C-210ENST00000640219 FA2HQ7L5A8 372 aa9.85□□□□□ -0.83
HLA-C-210ENST00000640219 TRPT1Q86TN4 253 aaKnown RBP9.85□□□□□ -0.83
HLA-C-210ENST00000640219 STHQ8IWL8 128 aa9.85□□□□□ -0.83
HLA-C-210ENST00000640219 F6UB75 175 aa9.84□□□□□ -0.83
HLA-C-210ENST00000640219 IGKV3-20P01619 116 aa9.84□□□□□ -0.83
HLA-C-210ENST00000640219 IGLC3P0DOY3 106 aa9.84□□□□□ -0.83
HLA-C-210ENST00000640219 FXYD7P58549 80 aa9.84□□□□□ -0.83
HLA-C-210ENST00000640219 C1orf134Q5TEV5 83 aa9.84□□□□□ -0.83
HLA-C-210ENST00000640219 PET117Q6UWS5 81 aa9.84□□□□□ -0.83
HLA-C-210ENST00000640219 COX8CQ7Z4L0 72 aa9.84□□□□□ -0.83
HLA-C-210ENST00000640219 Q8NAQ8 132 aa9.84□□□□□ -0.83
HLA-C-210ENST00000640219 PRSS3P2Q8NHM4 247 aa9.84□□□□□ -0.83
HLA-C-210ENST00000640219 C20orf173Q96LM9 149 aa9.84□□□□□ -0.83
HLA-C-210ENST00000640219 SLC50A1Q9BRV3 221 aa9.84□□□□□ -0.83
HLA-C-210ENST00000640219 A0A087X0K7 114 aa9.83□□□□□ -0.84
HLA-C-210ENST00000640219 M0R3E3 92 aa9.83□□□□□ -0.84
HLA-C-210ENST00000640219 SOCS3O14543 225 aa9.83□□□□□ -0.84
HLA-C-210ENST00000640219 SH2D1AO60880 128 aa9.83□□□□□ -0.84
HLA-C-210ENST00000640219 RBMY1A1P0DJD3 496 aaKnown RBP9.83□□□□□ -0.84
HLA-C-210ENST00000640219 RBMY1CP0DJD4 496 aa9.83□□□□□ -0.84
HLA-C-210ENST00000640219 RBMY1FQ15415 496 aaKnown RBP9.83□□□□□ -0.84
HLA-C-210ENST00000640219 EBLN2Q6P2I7 272 aa9.83□□□□□ -0.84
HLA-C-210ENST00000640219 TPPP3Q9BW30 176 aa9.83□□□□□ -0.84
HLA-C-210ENST00000640219 LRP1BQ9NZR2 4599 aa9.83□□□□□ -0.84
HLA-C-210ENST00000640219 APOBP04114 4563 aaKnown RBP9.82□□□□□ -0.84
HLA-C-210ENST00000640219 DEFB131BA0A096LNP1 70 aa9.82□□□□□ -0.84
HLA-C-210ENST00000640219 IGHV4-28A0A0C4DH34 117 aa9.82□□□□□ -0.84
HLA-C-210ENST00000640219 ARMS2P0C7Q2 107 aa9.82□□□□□ -0.84
HLA-C-210ENST00000640219 CMC4P56277 68 aaPredicted RBP9.82□□□□□ -0.84
HLA-C-210ENST00000640219 BATFQ16520 125 aa9.82□□□□□ -0.84
HLA-C-210ENST00000640219 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.82□□□□□ -0.84
HLA-C-210ENST00000640219 ZNF493Q6ZR52 646 aa9.82□□□□□ -0.84
HLA-C-210ENST00000640219 C8orf49Q96NF6 230 aa9.82□□□□□ -0.84
HLA-C-210ENST00000640219 MRPS16Q9Y3D3 137 aaKnown RBP9.82□□□□□ -0.84
HLA-C-210ENST00000640219 IGHV1-24A0A0C4DH33 117 aa9.81□□□□□ -0.84
HLA-C-210ENST00000640219 RBAKDNA6NC62 111 aa9.81□□□□□ -0.84
HLA-C-210ENST00000640219 FABP5P3A8MUU1 101 aa9.81□□□□□ -0.84
HLA-C-210ENST00000640219 SYS1-DBNDD2H3BUS1 97 aa9.81□□□□□ -0.84
HLA-C-210ENST00000640219 CRIP1P50238 77 aa9.81□□□□□ -0.84
HLA-C-210ENST00000640219 LYZL1Q6UWQ5 148 aa9.81□□□□□ -0.84
HLA-C-210ENST00000640219 UBE2DNLQ8IWF7 75 aa9.81□□□□□ -0.84
HLA-C-210ENST00000640219 RNF182Q8N6D2 247 aa9.81□□□□□ -0.84
HLA-C-210ENST00000640219 ST20Q9HBF5 79 aa9.81□□□□□ -0.84
HLA-C-210ENST00000640219 AP5S1Q9NUS5 200 aa9.81□□□□□ -0.84
HLA-C-210ENST00000640219 IGKV2-40A0A087WW87 121 aaPredicted RBP9.8□□□□□ -0.84
HLA-C-210ENST00000640219 CRXO43186 299 aaPredicted RBP9.8□□□□□ -0.84
HLA-C-210ENST00000640219 IGKV2D-40P01614 121 aaPredicted RBP9.8□□□□□ -0.84
HLA-C-210ENST00000640219 SNRPD3P62318 126 aaKnown RBP9.8□□□□□ -0.84
HLA-C-210ENST00000640219 TNP2Q05952 138 aa9.8□□□□□ -0.84
HLA-C-210ENST00000640219 FER1L6-AS1Q8NA97 138 aa9.8□□□□□ -0.84
HLA-C-210ENST00000640219 OR10AG1Q8NH19 301 aa9.8□□□□□ -0.84
HLA-C-210ENST00000640219 MRPL53Q96EL3 112 aaKnown RBP9.8□□□□□ -0.84
HLA-C-210ENST00000640219 URB1-AS1Q96HZ7 61 aa9.8□□□□□ -0.84
HLA-C-210ENST00000640219 TMSB15BA0A087X1C1 80 aa9.79□□□□□ -0.84
HLA-C-210ENST00000640219 H3BMM0 161 aa9.79□□□□□ -0.84
HLA-C-210ENST00000640219 ZNF25P17030 456 aaPredicted RBP9.79□□□□□ -0.84
HLA-C-210ENST00000640219 FAM104BQ5XKR9 115 aa9.79□□□□□ -0.84
HLA-C-210ENST00000640219 ATOH7Q8N100 152 aa9.79□□□□□ -0.84
HLA-C-210ENST00000640219 ORMDL3Q8N138 153 aa9.79□□□□□ -0.84
HLA-C-210ENST00000640219 C16orf92Q96LL3 132 aa9.79□□□□□ -0.84
HLA-C-210ENST00000640219 PRELID3AQ96N28 172 aa9.79□□□□□ -0.84
HLA-C-210ENST00000640219 XCL2Q9UBD3 114 aa9.79□□□□□ -0.84
HLA-C-210ENST00000640219 LAMTOR2Q9Y2Q5 125 aa9.79□□□□□ -0.84
HLA-C-210ENST00000640219 TRAV8-2A0A0B4J237 113 aa9.78□□□□□ -0.84
HLA-C-210ENST00000640219 ORM1P02763 201 aa9.78□□□□□ -0.84
HLA-C-210ENST00000640219 HLA-DRB4P13762 266 aa9.78□□□□□ -0.84
HLA-C-210ENST00000640219 MIFP14174 115 aa9.78□□□□□ -0.84
HLA-C-210ENST00000640219 HIST1H1AQ02539 215 aaPredicted RBP9.78□□□□□ -0.84
HLA-C-210ENST00000640219 PMCHL2Q9BQD1 86 aa9.78□□□□□ -0.84
HLA-C-210ENST00000640219 HLA-DRB4X5D2U9 266 aa9.78□□□□□ -0.84
HLA-C-210ENST00000640219 X6R8D5 127 aa9.78□□□□□ -0.84
HLA-C-210ENST00000640219 PPBPP02775 128 aa9.77□□□□□ -0.85
HLA-C-210ENST00000640219 INAFM2P0DMQ5 153 aa9.77□□□□□ -0.85
HLA-C-210ENST00000640219 TSPOP30536 169 aa9.77□□□□□ -0.85
HLA-C-210ENST00000640219 GAGE1Q13065 139 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms