RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091		D6R8Y8	96 aa		7.58	□□□□□ -1.2
NECAP1-223	ENST00000640091	IGHV4-30-4	P0DP06	118 aa		7.58	□□□□□ -1.2
NECAP1-223	ENST00000640091	TMEM256	Q8N2U0	113 aa		7.58	□□□□□ -1.2
NECAP1-223	ENST00000640091	C11orf72	Q8NBR9	251 aa		7.58	□□□□□ -1.2
NECAP1-223	ENST00000640091	GOLT1B	Q9Y3E0	138 aa		7.58	□□□□□ -1.2
NECAP1-223	ENST00000640091		A0A087WWL8	130 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	TRAV26-2	A0A0B4J265	109 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	NUPR1	O60356	82 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	NCR2	O95944	276 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	G0S2	P27469	103 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	EGFEM1P	Q0D2K5	195 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	SMIM15	Q7Z3B0	74 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	RCHY1	Q96PM5	261 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	NOTCH1	P46531	2555 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	KIR2DL5B	A0A0G2JN68	375 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	KIR2DL5B	A0A0G2JPC4	375 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091		M0R143	59 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	GATA1	P15976	413 aa	Predicted RBP	7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	ZNF25	P17030	456 aa	Predicted RBP	7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	CKS2	P33552	79 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	BAGE3	Q86Y29	109 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	KIR2DL5A	Q8N109	375 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	C18orf32	Q8TCD1	76 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	LINC00467	Q9BRT7	94 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	SAMD10	Q9BYL1	202 aa		7.57	□□□□□ -1.2
NECAP1-223	ENST00000640091	NXPH4	O95158	308 aa		7.56	□□□□□ -1.2
NECAP1-223	ENST00000640091	ZNF415	Q09FC8	603 aa		7.56	□□□□□ -1.2
NECAP1-223	ENST00000640091	ZNF705A	Q6ZN79	300 aa	Predicted RBP	7.56	□□□□□ -1.2
NECAP1-223	ENST00000640091	PRB2	P02812	416 aa	Predicted RBP	7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	MGP	P08493	103 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	FAM74A4	Q5TZK3	123 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	SYT8	Q8NBV8	401 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	RNASE8	Q8TDE3	154 aa	Known RBP	7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091		M0R2P5	195 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	SERF1A	O75920	110 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	NPS	P0C0P6	89 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	LINC00310	P59036	64 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091		Q0VG73	95 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	DEFB135	Q30KP9	77 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	ORMDL3	Q8N138	153 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	PRELID3A	Q96N28	172 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	AP1S3	Q96PC3	154 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	DPH3P1	Q9H4G8	78 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	MRPL16	Q9NX20	251 aa	Known RBP	7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	KIF25-AS1	Q9Y6Z4	181 aa		7.55	□□□□□ -1.2
NECAP1-223	ENST00000640091	LOC389332	A0A1B0GUA5	103 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	SMIM17	P0DL12	118 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	EMP1	P54849	157 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	LINC00315	P59091	139 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	RRN3P1	Q2M238	152 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	OR10J3	Q5JRS4	329 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	SAMD5	Q5TGI4	173 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	TMEM263	Q8WUH6	116 aa	Known RBP	7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091		U3KQK5	164 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	MGAM2	Q2M2H8	2515 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	IGHV3-73	A0A0B4J1V6	119 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091		F5H697	171 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	NPY	P01303	97 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	CRYGD	P07320	174 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	APOC4	P55056	127 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	KIR2DL5B	Q8NHK3	375 aa		7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	NOP10	Q9NPE3	64 aa	Known RBP	7.54	□□□□□ -1.2
NECAP1-223	ENST00000640091	PLAC8L1	A1L4L8	177 aa		7.53	□□□□□ -1.2
NECAP1-223	ENST00000640091	NIT1	Q86X76	327 aa		7.53	□□□□□ -1.2
NECAP1-223	ENST00000640091	NBEAL1	Q6ZS30	2694 aa		7.53	□□□□□ -1.2
NECAP1-223	ENST00000640091	TRGV1	A0A0A0MS02	117 aa		7.52	□□□□□ -1.2
NECAP1-223	ENST00000640091	URB1-AS1	Q96HZ7	61 aa		7.52	□□□□□ -1.2
NECAP1-223	ENST00000640091	SPX	Q9BT56	116 aa		7.52	□□□□□ -1.2
NECAP1-223	ENST00000640091	TNFRSF6B	O95407	300 aa		7.52	□□□□□ -1.21
NECAP1-223	ENST00000640091	COTL1	Q14019	142 aa		7.52	□□□□□ -1.21
NECAP1-223	ENST00000640091		Q6ZTI0	123 aa		7.52	□□□□□ -1.21
NECAP1-223	ENST00000640091	C16orf74	Q96GX8	76 aa		7.52	□□□□□ -1.21
NECAP1-223	ENST00000640091		X6R8D5	127 aa		7.52	□□□□□ -1.21
NECAP1-223	ENST00000640091	DEFB4A	O15263	64 aa		7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	PPBP	P02775	128 aa		7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	IFI27	P40305	119 aa	Predicted RBP	7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	RNASEK	Q6P5S7	137 aa	Known RBP	7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	FAM19A2	Q8N3H0	131 aa		7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	IL17D	Q8TAD2	202 aa		7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	RASL10A	Q92737	203 aa		7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	RPL39L	Q96EH5	51 aa	Known RBP	7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	ZNF56	Q15929	161 aa		7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	CFAP126	Q5VTH2	177 aa		7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	SUMO4	Q6EEV6	95 aa		7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	POM121L12	Q8N7R1	296 aa		7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	NRAC	Q8N912	160 aa		7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	OR11H2	Q8NH07	326 aa		7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	PRSS3P2	Q8NHM4	247 aa		7.51	□□□□□ -1.21
NECAP1-223	ENST00000640091	PMCHL1	Q16048	86 aa		7.5	□□□□□ -1.21
NECAP1-223	ENST00000640091	MRAP2	Q96G30	205 aa		7.5	□□□□□ -1.21
NECAP1-223	ENST00000640091	GAGE12B	A1L429	117 aa		7.49	□□□□□ -1.21
NECAP1-223	ENST00000640091		A8MWV9	139 aa		7.49	□□□□□ -1.21
NECAP1-223	ENST00000640091	GAGE7	O76087	117 aa		7.49	□□□□□ -1.21
NECAP1-223	ENST00000640091	IGHV3-53	P01767	116 aa		7.49	□□□□□ -1.21
NECAP1-223	ENST00000640091	GAGE12F	P0CL80	117 aa		7.49	□□□□□ -1.21
NECAP1-223	ENST00000640091	GAGE12G	P0CL81	117 aa		7.49	□□□□□ -1.21
NECAP1-223	ENST00000640091	GAGE12I	P0CL82	117 aa		7.49	□□□□□ -1.21
NECAP1-223	ENST00000640091	RBX1	P62877	108 aa		7.49	□□□□□ -1.21
NECAP1-223	ENST00000640091	DAZ2	Q13117	558 aa	Known RBP	7.49	□□□□□ -1.21
NECAP1-223	ENST00000640091		Q6ZSN1	163 aa		7.49	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms