RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 TMEM241Q24JQ0 296 aa5.85□□□□□ -1.47
SCARB2-220ENST00000640076 EBLN2Q6P2I7 272 aa5.85□□□□□ -1.47
SCARB2-220ENST00000640076 BAGE2Q86Y30 109 aa5.85□□□□□ -1.47
SCARB2-220ENST00000640076 TVP23CQ96ET8 276 aa5.85□□□□□ -1.47
SCARB2-220ENST00000640076 LINC00477Q96M19 166 aa5.85□□□□□ -1.47
SCARB2-220ENST00000640076 NAT8Q9UHE5 227 aa5.85□□□□□ -1.47
SCARB2-220ENST00000640076 IGLV5-52A0A0A0MRZ9 124 aa5.84□□□□□ -1.47
SCARB2-220ENST00000640076 KNCNA6PVL3 124 aa5.84□□□□□ -1.47
SCARB2-220ENST00000640076 IGLV2-8P01709 118 aa5.84□□□□□ -1.47
SCARB2-220ENST00000640076 APOC3P02656 99 aa5.84□□□□□ -1.47
SCARB2-220ENST00000640076 CMC4P56277 68 aaPredicted RBP5.84□□□□□ -1.47
SCARB2-220ENST00000640076 FA2HQ7L5A8 372 aa5.84□□□□□ -1.47
SCARB2-220ENST00000640076 LINC01551Q86U37 167 aa5.84□□□□□ -1.47
SCARB2-220ENST00000640076 SDF2L1Q9HCN8 221 aa5.84□□□□□ -1.47
SCARB2-220ENST00000640076 ZFP30Q9Y2G7 519 aa5.84□□□□□ -1.47
SCARB2-220ENST00000640076 LY96Q9Y6Y9 160 aa5.84□□□□□ -1.47
SCARB2-220ENST00000640076 A0A087WX48 190 aa5.84□□□□□ -1.48
SCARB2-220ENST00000640076 H3BMM0 161 aa5.84□□□□□ -1.48
SCARB2-220ENST00000640076 CT45A10P0DMU9 189 aa5.84□□□□□ -1.48
SCARB2-220ENST00000640076 HLA-DRB4P13762 266 aa5.84□□□□□ -1.48
SCARB2-220ENST00000640076 OR5I1Q13606 314 aa5.84□□□□□ -1.48
SCARB2-220ENST00000640076 FAM162BQ5T6X4 162 aa5.84□□□□□ -1.48
SCARB2-220ENST00000640076 TMEM183AQ8IXX5 376 aa5.84□□□□□ -1.48
SCARB2-220ENST00000640076 C2orf48Q96LS8 159 aa5.84□□□□□ -1.48
SCARB2-220ENST00000640076 WFDC10AQ9H1F0 79 aa5.84□□□□□ -1.48
SCARB2-220ENST00000640076 ZNF492Q9P255 531 aa5.84□□□□□ -1.48
SCARB2-220ENST00000640076 HLA-DRB4X5D2U9 266 aa5.84□□□□□ -1.48
SCARB2-220ENST00000640076 DNAH3Q8TD57 4116 aa5.83□□□□□ -1.48
SCARB2-220ENST00000640076 A8MTW9 85 aa5.83□□□□□ -1.48
SCARB2-220ENST00000640076 DUSP14O95147 198 aaKnown RBP5.83□□□□□ -1.48
SCARB2-220ENST00000640076 FRMD6-AS1P0C7T7 363 aa5.83□□□□□ -1.48
SCARB2-220ENST00000640076 RPL23P62829 140 aaKnown RBP5.83□□□□□ -1.48
SCARB2-220ENST00000640076 EGFEM1PQ0D2K5 195 aa5.83□□□□□ -1.48
SCARB2-220ENST00000640076 GTSCR1Q86UQ5 136 aa5.83□□□□□ -1.48
SCARB2-220ENST00000640076 FAM19A4Q96LR4 140 aa5.83□□□□□ -1.48
SCARB2-220ENST00000640076 C20orf144Q9BQM9 153 aa5.83□□□□□ -1.48
SCARB2-220ENST00000640076 NDFIP1Q9BT67 221 aa5.83□□□□□ -1.48
SCARB2-220ENST00000640076 LENEPQ9Y5L5 61 aa5.83□□□□□ -1.48
SCARB2-220ENST00000640076 IGKV3-20P01619 116 aa5.82□□□□□ -1.48
SCARB2-220ENST00000640076 MGST1P10620 155 aaKnown RBP5.82□□□□□ -1.48
SCARB2-220ENST00000640076 ADIRFQ15847 76 aa5.82□□□□□ -1.48
SCARB2-220ENST00000640076 AMTNQ6UX39 209 aa5.82□□□□□ -1.48
SCARB2-220ENST00000640076 SVBPQ8N300 66 aa5.82□□□□□ -1.48
SCARB2-220ENST00000640076 OR4B1Q8NGF8 309 aa5.82□□□□□ -1.48
SCARB2-220ENST00000640076 ZC2HC1AQ96GY0 325 aa5.82□□□□□ -1.48
SCARB2-220ENST00000640076 C8orf49Q96NF6 230 aa5.82□□□□□ -1.48
SCARB2-220ENST00000640076 ODF3Q96PU9 254 aa5.82□□□□□ -1.48
SCARB2-220ENST00000640076 RBMY1BA6NDE4 496 aaKnown RBP5.82□□□□□ -1.48
SCARB2-220ENST00000640076 RBMY1EA6NEQ0 496 aaKnown RBP5.82□□□□□ -1.48
SCARB2-220ENST00000640076 RBMY1DP0C7P1 496 aaKnown RBP5.82□□□□□ -1.48
SCARB2-220ENST00000640076 CRISP2P16562 243 aa5.82□□□□□ -1.48
SCARB2-220ENST00000640076 TRPT1Q86TN4 253 aaKnown RBP5.82□□□□□ -1.48
SCARB2-220ENST00000640076 ZFAND2AQ8N6M9 145 aa5.82□□□□□ -1.48
SCARB2-220ENST00000640076 CRIP1P50238 77 aa5.81□□□□□ -1.48
SCARB2-220ENST00000640076 KRTAP10-11P60412 298 aa5.81□□□□□ -1.48
SCARB2-220ENST00000640076 LINC00322Q6ZN03 302 aaPredicted RBP5.81□□□□□ -1.48
SCARB2-220ENST00000640076 DEFB125Q8N687 156 aa5.81□□□□□ -1.48
SCARB2-220ENST00000640076 PKIGQ9Y2B9 76 aa5.81□□□□□ -1.48
SCARB2-220ENST00000640076 KLLNB2CW77 178 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 ZNF80P51504 273 aaPredicted RBP5.8□□□□□ -1.48
SCARB2-220ENST00000640076 PRR9Q5T870 116 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 MPLKIPQ8TAP9 179 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 IGLV5-45A0A087WSX0 123 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 C7orf77A4D0Y5 90 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 C19orf71A6NCJ1 209 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 B4DEV8 164 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 M0R2Z0 102 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 GPX1P07203 203 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 TSPOP30536 169 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 PMVKQ15126 192 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 RHEBQ15382 184 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 SPINK13Q1W4C9 94 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 CBLN2Q8IUK8 224 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 ZNRF2Q8NHG8 242 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 TMEM126AQ9H061 195 aa5.8□□□□□ -1.48
SCARB2-220ENST00000640076 RNASE7Q9H1E1 156 aaKnown RBP5.8□□□□□ -1.48
SCARB2-220ENST00000640076 FAM240AA0A1B0GVK7 77 aa5.79□□□□□ -1.48
SCARB2-220ENST00000640076 TMEM189A5PLL7 270 aa5.79□□□□□ -1.48
SCARB2-220ENST00000640076 SH2D1AO60880 128 aa5.79□□□□□ -1.48
SCARB2-220ENST00000640076 RNASE4P34096 147 aaKnown RBP5.79□□□□□ -1.48
SCARB2-220ENST00000640076 ERVFC1-1P60608 527 aa5.79□□□□□ -1.48
SCARB2-220ENST00000640076 IBA57Q5T440 356 aaKnown RBP5.79□□□□□ -1.48
SCARB2-220ENST00000640076 GFI1BQ5VTD9 330 aa5.79□□□□□ -1.48
SCARB2-220ENST00000640076 Q6ZVH6 145 aa5.79□□□□□ -1.48
SCARB2-220ENST00000640076 ORAOV1Q8WV07 137 aa5.79□□□□□ -1.48
SCARB2-220ENST00000640076 CST9LQ9H4G1 147 aa5.79□□□□□ -1.48
SCARB2-220ENST00000640076 TRAV12-2A0A075B6T6 113 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 FABP5P3A8MUU1 101 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 MT-ND4LP03901 98 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 PFN1P07737 140 aaKnown RBP5.78□□□□□ -1.48
SCARB2-220ENST00000640076 OR5AL1P0C617 328 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 FXYD7P58549 80 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 Q6ZQT7 251 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 OR10G8Q8NGN5 311 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 FAM218AQ96MZ4 157 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 OSTCQ9NRP0 149 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 IGLV5-37A0A075B6J1 123 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 A0A087WWC5 75 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 C7orf71A4D174 169 aa5.78□□□□□ -1.48
SCARB2-220ENST00000640076 LYRM9A8MSI8 78 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms