RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 TDRG1Q3Y452 100 aa9.09□□□□□ -0.95
PAX6-261ENST00000639943 MAP1LC3AQ9H492 121 aa9.09□□□□□ -0.95
PAX6-261ENST00000639943 HSPB8Q9UJY1 196 aa9.09□□□□□ -0.95
PAX6-261ENST00000639943 M0R381 172 aa9.09□□□□□ -0.95
PAX6-261ENST00000639943 SPAG8Q99932 426 aaPredicted RBP9.09□□□□□ -0.95
PAX6-261ENST00000639943 TMEM70Q9BUB7 260 aa9.09□□□□□ -0.95
PAX6-261ENST00000639943 OR4C46A6NHA9 309 aa9.08□□□□□ -0.96
PAX6-261ENST00000639943 HLA-DRB4P13762 266 aa9.08□□□□□ -0.96
PAX6-261ENST00000639943 SPINK13Q1W4C9 94 aa9.08□□□□□ -0.96
PAX6-261ENST00000639943 CD300EQ496F6 205 aaPredicted RBP9.08□□□□□ -0.96
PAX6-261ENST00000639943 AMTNQ6UX39 209 aa9.08□□□□□ -0.96
PAX6-261ENST00000639943 MIEN1Q9BRT3 115 aa9.08□□□□□ -0.96
PAX6-261ENST00000639943 VAMP8Q9BV40 100 aa9.08□□□□□ -0.96
PAX6-261ENST00000639943 HLA-DRB4X5D2U9 266 aa9.08□□□□□ -0.96
PAX6-261ENST00000639943 NOTCH2Q04721 2471 aa9.08□□□□□ -0.96
PAX6-261ENST00000639943 KNCNA6PVL3 124 aa9.08□□□□□ -0.96
PAX6-261ENST00000639943 A8MTW9 85 aa9.08□□□□□ -0.96
PAX6-261ENST00000639943 C1orf43Q9BWL3 253 aa9.08□□□□□ -0.96
PAX6-261ENST00000639943 COX11Q9Y6N1 276 aa9.08□□□□□ -0.96
PAX6-261ENST00000639943 TRAV12-2A0A075B6T6 113 aa9.07□□□□□ -0.96
PAX6-261ENST00000639943 CD7P09564 240 aa9.07□□□□□ -0.96
PAX6-261ENST00000639943 MRAP2Q96G30 205 aa9.07□□□□□ -0.96
PAX6-261ENST00000639943 NXT2Q9NPJ8 142 aaKnown RBP9.07□□□□□ -0.96
PAX6-261ENST00000639943 WNK1Q9H4A3 2382 aa9.07□□□□□ -0.96
PAX6-261ENST00000639943 H3BMM0 161 aa9.07□□□□□ -0.96
PAX6-261ENST00000639943 NXPH4O95158 308 aa9.07□□□□□ -0.96
PAX6-261ENST00000639943 PROK1P58294 105 aa9.07□□□□□ -0.96
PAX6-261ENST00000639943 RPL32P62910 135 aaKnown RBP9.07□□□□□ -0.96
PAX6-261ENST00000639943 OR2K2Q8NGT1 345 aa9.07□□□□□ -0.96
PAX6-261ENST00000639943 MAP1LC3CQ9BXW4 147 aa9.07□□□□□ -0.96
PAX6-261ENST00000639943 DPH3P1Q9H4G8 78 aa9.07□□□□□ -0.96
PAX6-261ENST00000639943 CUBNO60494 3623 aa9.06□□□□□ -0.96
PAX6-261ENST00000639943 MUC4Q99102 2169 aa9.06□□□□□ -0.96
PAX6-261ENST00000639943 IGHV1OR15-1A0A075B7D0 117 aa9.06□□□□□ -0.96
PAX6-261ENST00000639943 CRXO43186 299 aaPredicted RBP9.06□□□□□ -0.96
PAX6-261ENST00000639943 AP1S3Q96PC3 154 aa9.06□□□□□ -0.96
PAX6-261ENST00000639943 MAP6D1Q9H9H5 199 aa9.06□□□□□ -0.96
PAX6-261ENST00000639943 LINC01546A6NGU7 62 aa9.06□□□□□ -0.96
PAX6-261ENST00000639943 G3V4G9 280 aa9.06□□□□□ -0.96
PAX6-261ENST00000639943 SYS1-DBNDD2H3BUS1 97 aa9.06□□□□□ -0.96
PAX6-261ENST00000639943 SPRY2O43597 315 aa9.06□□□□□ -0.96
PAX6-261ENST00000639943 GAS8-AS1O95177 125 aa9.06□□□□□ -0.96
PAX6-261ENST00000639943 LINC00173Q6ZV60 143 aa9.06□□□□□ -0.96
PAX6-261ENST00000639943 SS18L2Q9UHA2 77 aa9.06□□□□□ -0.96
PAX6-261ENST00000639943 SETXQ7Z333 2677 aaKnown RBP9.05□□□□□ -0.96
PAX6-261ENST00000639943 GATA1P15976 413 aaPredicted RBP9.05□□□□□ -0.96
PAX6-261ENST00000639943 BATFQ16520 125 aa9.05□□□□□ -0.96
PAX6-261ENST00000639943 C20orf144Q9BQM9 153 aa9.05□□□□□ -0.96
PAX6-261ENST00000639943 ZNF256Q9Y2P7 627 aaPredicted RBP9.05□□□□□ -0.96
PAX6-261ENST00000639943 IGHV3-16A0A0C4DH30 117 aa9.05□□□□□ -0.96
PAX6-261ENST00000639943 DEFB125Q8N687 156 aa9.05□□□□□ -0.96
PAX6-261ENST00000639943 C14orf178Q8N769 122 aaPredicted RBP9.05□□□□□ -0.96
PAX6-261ENST00000639943 NRACQ8N912 160 aa9.05□□□□□ -0.96
PAX6-261ENST00000639943 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
PAX6-261ENST00000639943 KRTAP3-2Q9BYR7 98 aa9.05□□□□□ -0.96
PAX6-261ENST00000639943 PAM16Q9Y3D7 125 aa9.05□□□□□ -0.96
PAX6-261ENST00000639943 HBDP02042 147 aa9.04□□□□□ -0.96
PAX6-261ENST00000639943 Q8N8P6 123 aa9.04□□□□□ -0.96
PAX6-261ENST00000639943 C9orf85Q96MD7 179 aa9.04□□□□□ -0.96
PAX6-261ENST00000639943 SIGMAR1Q99720 223 aa9.04□□□□□ -0.96
PAX6-261ENST00000639943 A0A096LNJ9 63 aa9.04□□□□□ -0.96
PAX6-261ENST00000639943 ZNF747Q9BV97 191 aa9.04□□□□□ -0.96
PAX6-261ENST00000639943 FLNBO75369 2602 aaKnown RBP9.03□□□□□ -0.96
PAX6-261ENST00000639943 TRAV26-2A0A0B4J265 109 aa9.03□□□□□ -0.96
PAX6-261ENST00000639943 INAFM1C9JVW0 142 aa9.03□□□□□ -0.96
PAX6-261ENST00000639943 FXYD7P58549 80 aa9.03□□□□□ -0.96
PAX6-261ENST00000639943 Q8N1Y9 231 aa9.03□□□□□ -0.96
PAX6-261ENST00000639943 PTH2Q96A98 100 aa9.03□□□□□ -0.96
PAX6-261ENST00000639943 SETD2Q9BYW2 2564 aaPredicted RBP9.03□□□□□ -0.96
PAX6-261ENST00000639943 TRGV11A0A075B6L2 103 aa9.03□□□□□ -0.96
PAX6-261ENST00000639943 ADARB2-AS1A8MUL3 147 aa9.03□□□□□ -0.96
PAX6-261ENST00000639943 SMIM17P0DL12 118 aa9.03□□□□□ -0.96
PAX6-261ENST00000639943 AZU1P20160 251 aa9.03□□□□□ -0.96
PAX6-261ENST00000639943 SYT8Q8NBV8 401 aa9.03□□□□□ -0.96
PAX6-261ENST00000639943 IGLV2-18A0A075B6J9 118 aa9.02□□□□□ -0.97
PAX6-261ENST00000639943 RBMY1BA6NDE4 496 aaKnown RBP9.02□□□□□ -0.97
PAX6-261ENST00000639943 RBMY1EA6NEQ0 496 aaKnown RBP9.02□□□□□ -0.97
PAX6-261ENST00000639943 CYSRT1A8MQ03 144 aa9.02□□□□□ -0.97
PAX6-261ENST00000639943 MGPP08493 103 aa9.02□□□□□ -0.97
PAX6-261ENST00000639943 RBMY1DP0C7P1 496 aaKnown RBP9.02□□□□□ -0.97
PAX6-261ENST00000639943 NSUN5P1Q3KNT7 163 aa9.02□□□□□ -0.97
PAX6-261ENST00000639943 SPATA45Q537H7 98 aa9.02□□□□□ -0.97
PAX6-261ENST00000639943 SPATA12Q7Z6I5 190 aa9.02□□□□□ -0.97
PAX6-261ENST00000639943 POM121L12Q8N7R1 296 aa9.02□□□□□ -0.97
PAX6-261ENST00000639943 OTOGQ6ZRI0 2925 aa9.02□□□□□ -0.97
PAX6-261ENST00000639943 PPP1R17O96001 155 aa9.02□□□□□ -0.97
PAX6-261ENST00000639943 SMIM20Q8N5G0 67 aa9.02□□□□□ -0.97
PAX6-261ENST00000639943 MDFICQ9P1T7 246 aa9.02□□□□□ -0.97
PAX6-261ENST00000639943 FCER1GP30273 86 aa9.01□□□□□ -0.97
PAX6-261ENST00000639943 NDUFA11Q86Y39 141 aa9.01□□□□□ -0.97
PAX6-261ENST00000639943 ATOH7Q8N100 152 aa9.01□□□□□ -0.97
PAX6-261ENST00000639943 TRAV9-2A0A087WT02 112 aa9.01□□□□□ -0.97
PAX6-261ENST00000639943 CMC4P56277 68 aaPredicted RBP9.01□□□□□ -0.97
PAX6-261ENST00000639943 ODF3L2Q3SX64 289 aa9.01□□□□□ -0.97
PAX6-261ENST00000639943 C20orf78Q9BR46 151 aa9.01□□□□□ -0.97
PAX6-261ENST00000639943 KIF25-AS1Q9Y6Z4 181 aa9.01□□□□□ -0.97
PAX6-261ENST00000639943 RASL10AQ92737 203 aa9□□□□□ -0.97
PAX6-261ENST00000639943 RBMY1A1P0DJD3 496 aaKnown RBP9□□□□□ -0.97
PAX6-261ENST00000639943 RBMY1CP0DJD4 496 aa9□□□□□ -0.97
PAX6-261ENST00000639943 RBMY1FQ15415 496 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms